RNA–Protein interactions for RNA: ENST00000521663.1

LINC00588-201, long intergenic non-protein coding RNA 588, humanhuman

TSL 2 BASIC

Gene LINC00588, Length 1,875 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588-201ENST00000521663 NISCHQ9Y2I1 1504 aa55.05■■■■■ 6.4
LINC00588-201ENST00000521663 CCDC180Q9P1Z9 1646 aa48.72■■■■■ 5.39
LINC00588-201ENST00000521663 ABCC9O60706 1549 aa47.21■■■■■ 5.15
LINC00588-201ENST00000521663 ZCCHC6Q5VYS8 1495 aaKnown RBP45.97■■■■■ 4.95
LINC00588-201ENST00000521663 DCAF8L2P0C7V8 631 aa45.78■■■■■ 4.92
LINC00588-201ENST00000521663 NACADO15069 1562 aa45.67■■■■■ 4.9
LINC00588-201ENST00000521663 RB1CC1Q8TDY2 1594 aa45.61■■■■■ 4.89
LINC00588-201ENST00000521663 MYO15BQ96JP2 1530 aa45.56■■■■■ 4.88
LINC00588-201ENST00000521663 DCAF1Q9Y4B6 1507 aa45.56■■■■■ 4.88
LINC00588-201ENST00000521663 UNC13AQ9UPW8 1703 aa44.67■■■■■ 4.74
LINC00588-201ENST00000521663 SCRIBQ14160 1630 aa44.52■■■■■ 4.72
LINC00588-201ENST00000521663 SHROOM4Q9ULL8 1493 aa44.38■■■■■ 4.7
LINC00588-201ENST00000521663 BICRAQ9NZM4 1560 aa44.26■■■■■ 4.68
LINC00588-201ENST00000521663 PABPN1Q86U42 306 aaKnown RBP eCLIP44.19■■■■■ 4.67
LINC00588-201ENST00000521663 EIF4G1Q04637 1599 aaKnown RBP43.03■■■■■ 4.48
LINC00588-201ENST00000521663 SUPT5HO00267 1087 aaKnown RBP42.96■■■■■ 4.47
LINC00588-201ENST00000521663 DNAJC5BQ9UF47 199 aa42.9■■■■■ 4.46
LINC00588-201ENST00000521663 CECR2Q9BXF3 1484 aa42.86■■■■■ 4.45
LINC00588-201ENST00000521663 CC2D2AQ9P2K1 1620 aa42.74■■■■■ 4.43
LINC00588-201ENST00000521663 SMARCA4P51532 1647 aa42.62■■■■■ 4.41
LINC00588-201ENST00000521663 BAZ1AQ9NRL2 1556 aaPredicted RBP42.62■■■■■ 4.41
LINC00588-201ENST00000521663 MROH2BQ7Z745 1585 aa42.46■■■■■ 4.39
LINC00588-201ENST00000521663 ATAD2BQ9ULI0 1458 aa42.26■■■■■ 4.36
LINC00588-201ENST00000521663 SMARCA2P51531 1590 aa42.21■■■■■ 4.35
LINC00588-201ENST00000521663 PEG3Q9GZU2 1588 aa42.19■■■■■ 4.35
LINC00588-201ENST00000521663 RSF1Q96T23 1441 aaPredicted RBP42.16■■■■■ 4.34
LINC00588-201ENST00000521663 NCAPD3P42695 1498 aa42.14■■■■■ 4.34
LINC00588-201ENST00000521663 WIZO95785 1651 aa42.05■■■■■ 4.32
LINC00588-201ENST00000521663 HMGXB3Q12766 1538 aa41.99■■■■■ 4.31
LINC00588-201ENST00000521663 BAZ1BQ9UIG0 1483 aaKnown RBP41.92■■■■■ 4.3
LINC00588-201ENST00000521663 TOP2AP11388 1531 aaKnown RBP41.59■■■■■ 4.25
LINC00588-201ENST00000521663 CHIC1Q5VXU3 224 aa41.55■■■■■ 4.24
LINC00588-201ENST00000521663 CCDC88BA6NC98 1476 aa41.1■■■■■ 4.17
LINC00588-201ENST00000521663 NESP48681 1621 aa41.02■■■■■ 4.16
LINC00588-201ENST00000521663 LAMC3Q9Y6N6 1575 aa40.96■■■■■ 4.15
LINC00588-201ENST00000521663 CADPSQ9ULU8 1353 aa40.94■■■■■ 4.14
LINC00588-201ENST00000521663 CFTRP13569 1480 aa40.81■■■■■ 4.12
LINC00588-201ENST00000521663 PDS5BQ9NTI5 1447 aa40.64■■■■■ 4.1
LINC00588-201ENST00000521663 ERCC6Q03468 1493 aa40.62■■■■■ 4.09
LINC00588-201ENST00000521663 PRDM2Q13029 1718 aa40.59■■■■■ 4.09
LINC00588-201ENST00000521663 KIF21AQ7Z4S6 1674 aa40.57■■■■■ 4.08
LINC00588-201ENST00000521663 FANCD2Q9BXW9 1451 aa40.48■■■■■ 4.07
LINC00588-201ENST00000521663 TRIM41Q8WV44 630 aa40.37■■■■■ 4.05
LINC00588-201ENST00000521663 CEP164Q9UPV0 1460 aa40.37■■■■■ 4.05
LINC00588-201ENST00000521663 THOC2Q8NI27 1593 aaKnown RBP40.29■■■■■ 4.04
LINC00588-201ENST00000521663 MRC2Q9UBG0 1479 aa40.21■■■■■ 4.03
LINC00588-201ENST00000521663 WDR62O43379 1518 aa40.08■■■■■ 4.01
LINC00588-201ENST00000521663 URB2Q14146 1524 aaKnown RBP40.06■■■■■ 4
LINC00588-201ENST00000521663 CUX2O14529 1486 aa40.01■■■■□ 3.99
LINC00588-201ENST00000521663 ABCC8Q09428 1581 aa40■■■■□ 3.99
LINC00588-201ENST00000521663 LOC105371045A0A1W2PR82 267 aa39.9■■■■□ 3.98
LINC00588-201ENST00000521663 TOPBP1Q92547 1522 aa39.9■■■■□ 3.98
LINC00588-201ENST00000521663 DNMBPQ6XZF7 1577 aa39.89■■■■□ 3.98
LINC00588-201ENST00000521663 CUX1P39880 1505 aa39.8■■■■□ 3.96
LINC00588-201ENST00000521663 WRNQ14191 1432 aaPredicted RBP eCLIP39.7■■■■□ 3.95
LINC00588-201ENST00000521663 SYNJ1O43426 1573 aa39.61■■■■□ 3.93
LINC00588-201ENST00000521663 FAM9AQ8IZU1 332 aaPredicted RBP39.61■■■■□ 3.93
LINC00588-201ENST00000521663 POLA1P09884 1462 aaPredicted RBP39.6■■■■□ 3.93
LINC00588-201ENST00000521663 BIVM-ERCC5R4GMW8 1640 aa39.58■■■■□ 3.93
LINC00588-201ENST00000521663 TOP2BQ02880 1626 aa39.58■■■■□ 3.93
LINC00588-201ENST00000521663 FGD5Q6ZNL6 1462 aa39.57■■■■□ 3.93
LINC00588-201ENST00000521663 IFT140Q96RY7 1462 aa39.49■■■■□ 3.91
LINC00588-201ENST00000521663 EEA1Q15075 1411 aa39.46■■■■□ 3.91
LINC00588-201ENST00000521663 TARBP1Q13395 1621 aaKnown RBP39.44■■■■□ 3.9
LINC00588-201ENST00000521663 RAD54L2Q9Y4B4 1467 aa39.43■■■■□ 3.9
LINC00588-201ENST00000521663 SOGA1O94964 1423 aa39.42■■■■□ 3.9
LINC00588-201ENST00000521663 ZNF608Q9ULD9 1512 aaPredicted RBP39.32■■■■□ 3.88
LINC00588-201ENST00000521663 WDR97A6NE52 1622 aa39.25■■■■□ 3.87
LINC00588-201ENST00000521663 ABCA10Q8WWZ4 1543 aa39.21■■■■□ 3.87
LINC00588-201ENST00000521663 EIF4G3O43432 1585 aaKnown RBP39.18■■■■□ 3.86
LINC00588-201ENST00000521663 RUSC2Q8N2Y8 1516 aa39.17■■■■□ 3.86
LINC00588-201ENST00000521663 AQRO60306 1485 aaKnown RBP eCLIP39.15■■■■□ 3.86
LINC00588-201ENST00000521663 TDRD9Q8NDG6 1382 aaKnown RBP39.15■■■■□ 3.86
LINC00588-201ENST00000521663 CSRNP3Q8WYN3 585 aa39.05■■■■□ 3.84
LINC00588-201ENST00000521663 ABCA5Q8WWZ7 1642 aa39.03■■■■□ 3.84
LINC00588-201ENST00000521663 KIF21BO75037 1637 aa38.99■■■■□ 3.83
LINC00588-201ENST00000521663 GAPVD1Q14C86 1478 aa38.98■■■■□ 3.83
LINC00588-201ENST00000521663 EHMT2Q96KQ7 1210 aa38.96■■■■□ 3.83
LINC00588-201ENST00000521663 GOLGA3Q08378 1498 aa38.93■■■■□ 3.82
LINC00588-201ENST00000521663 PBRM1Q86U86 1689 aa38.91■■■■□ 3.82
LINC00588-201ENST00000521663 TNIKQ9UKE5 1360 aa38.9■■■■□ 3.82
LINC00588-201ENST00000521663 GRIN2BQ13224 1484 aa38.89■■■■□ 3.82
LINC00588-201ENST00000521663 KIF27Q86VH2 1401 aa38.81■■■■□ 3.8
LINC00588-201ENST00000521663 SNAPC4Q5SXM2 1469 aa38.79■■■■□ 3.8
LINC00588-201ENST00000521663 CEP162Q5TB80 1403 aa38.74■■■■□ 3.79
LINC00588-201ENST00000521663 MAGI1Q96QZ7 1491 aaPredicted RBP38.74■■■■□ 3.79
LINC00588-201ENST00000521663 ERICH3Q5RHP9 1530 aa38.74■■■■□ 3.79
LINC00588-201ENST00000521663 PCGF6Q9BYE7 350 aa38.73■■■■□ 3.79
LINC00588-201ENST00000521663 TRIM26Q12899 539 aaPredicted RBP38.64■■■■□ 3.78
LINC00588-201ENST00000521663 IGF1RP08069 1367 aa38.62■■■■□ 3.77
LINC00588-201ENST00000521663 CHD1O14646 1710 aa38.62■■■■□ 3.77
LINC00588-201ENST00000521663 ADAMTS12P58397 1594 aa38.6■■■■□ 3.77
LINC00588-201ENST00000521663 SYNJ2O15056 1496 aa38.58■■■■□ 3.77
LINC00588-201ENST00000521663 FBLN2P98095 1184 aa38.56■■■■□ 3.76
LINC00588-201ENST00000521663 RAPGEF2Q9Y4G8 1499 aa38.54■■■■□ 3.76
LINC00588-201ENST00000521663 FHAD1B1AJZ9 1412 aa38.54■■■■□ 3.76
LINC00588-201ENST00000521663 PRXQ9BXM0 1461 aa38.54■■■■□ 3.76
LINC00588-201ENST00000521663 UBTFP17480 764 aaKnown RBP38.54■■■■□ 3.76
LINC00588-201ENST00000521663 CHMP7Q8WUX9 453 aaPredicted RBP38.52■■■■□ 3.76
LINC00588-201ENST00000521663 CUL7Q14999 1698 aa38.49■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms