RNA–Protein interactions for RNA: ENST00000628084.2

CDC16-211, Transcript of cell division cycle 16, humanhuman

TSL 5 BASIC

Gene CDC16, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-211ENST00000628084 NISCHQ9Y2I1 1504 aa54.59■■■■■ 6.33
CDC16-211ENST00000628084 CCDC180Q9P1Z9 1646 aa47.37■■■■■ 5.17
CDC16-211ENST00000628084 ZCCHC6Q5VYS8 1495 aaKnown RBP45.9■■■■■ 4.94
CDC16-211ENST00000628084 DCAF8L2P0C7V8 631 aa45.24■■■■■ 4.83
CDC16-211ENST00000628084 DCAF1Q9Y4B6 1507 aa45.06■■■■■ 4.8
CDC16-211ENST00000628084 SHROOM4Q9ULL8 1493 aa44.96■■■■■ 4.79
CDC16-211ENST00000628084 ABCC9O60706 1549 aa44.64■■■■■ 4.74
CDC16-211ENST00000628084 MYO15BQ96JP2 1530 aa44.39■■■■■ 4.7
CDC16-211ENST00000628084 NACADO15069 1562 aa44.07■■■■■ 4.65
CDC16-211ENST00000628084 SCRIBQ14160 1630 aa43.74■■■■■ 4.59
CDC16-211ENST00000628084 RB1CC1Q8TDY2 1594 aa43.64■■■■■ 4.58
CDC16-211ENST00000628084 SUPT5HO00267 1087 aaKnown RBP43.47■■■■■ 4.55
CDC16-211ENST00000628084 UNC13AQ9UPW8 1703 aa42.77■■■■■ 4.44
CDC16-211ENST00000628084 RSF1Q96T23 1441 aaPredicted RBP42.51■■■■■ 4.4
CDC16-211ENST00000628084 CECR2Q9BXF3 1484 aa42.44■■■■■ 4.38
CDC16-211ENST00000628084 BICRAQ9NZM4 1560 aa42.3■■■■■ 4.36
CDC16-211ENST00000628084 PABPN1Q86U42 306 aaKnown RBP eCLIP42.23■■■■■ 4.35
CDC16-211ENST00000628084 MROH2BQ7Z745 1585 aa42.22■■■■■ 4.35
CDC16-211ENST00000628084 BAZ1AQ9NRL2 1556 aaPredicted RBP42.14■■■■■ 4.34
CDC16-211ENST00000628084 WIZO95785 1651 aa41.91■■■■■ 4.3
CDC16-211ENST00000628084 SMARCA4P51532 1647 aa41.89■■■■■ 4.3
CDC16-211ENST00000628084 CHIC1Q5VXU3 224 aa41.7■■■■■ 4.27
CDC16-211ENST00000628084 TOP2AP11388 1531 aaKnown RBP41.43■■■■■ 4.22
CDC16-211ENST00000628084 PEG3Q9GZU2 1588 aa41.31■■■■■ 4.2
CDC16-211ENST00000628084 ATAD2BQ9ULI0 1458 aa41.13■■■■■ 4.17
CDC16-211ENST00000628084 SMARCA2P51531 1590 aa41.1■■■■■ 4.17
CDC16-211ENST00000628084 CCDC88BA6NC98 1476 aa41.07■■■■■ 4.16
CDC16-211ENST00000628084 EIF4G1Q04637 1599 aaKnown RBP41.03■■■■■ 4.16
CDC16-211ENST00000628084 BAZ1BQ9UIG0 1483 aaKnown RBP40.95■■■■■ 4.15
CDC16-211ENST00000628084 TRIM41Q8WV44 630 aa40.81■■■■■ 4.12
CDC16-211ENST00000628084 NCAPD3P42695 1498 aa40.69■■■■■ 4.1
CDC16-211ENST00000628084 HMGXB3Q12766 1538 aa40.64■■■■■ 4.1
CDC16-211ENST00000628084 ABCC8Q09428 1581 aa40.36■■■■■ 4.05
CDC16-211ENST00000628084 CC2D2AQ9P2K1 1620 aa40.35■■■■■ 4.05
CDC16-211ENST00000628084 LOC105371045A0A1W2PR82 267 aa40.2■■■■■ 4.03
CDC16-211ENST00000628084 FAM9AQ8IZU1 332 aaPredicted RBP40.13■■■■■ 4.01
CDC16-211ENST00000628084 WRNQ14191 1432 aaPredicted RBP eCLIP40.03■■■■■ 4
CDC16-211ENST00000628084 CFTRP13569 1480 aa39.9■■■■□ 3.98
CDC16-211ENST00000628084 SYNJ1O43426 1573 aa39.82■■■■□ 3.97
CDC16-211ENST00000628084 CADPSQ9ULU8 1353 aa39.72■■■■□ 3.95
CDC16-211ENST00000628084 SOGA1O94964 1423 aa39.68■■■■□ 3.94
CDC16-211ENST00000628084 PRDM2Q13029 1718 aa39.67■■■■□ 3.94
CDC16-211ENST00000628084 EHMT2Q96KQ7 1210 aa39.63■■■■□ 3.93
CDC16-211ENST00000628084 TOP2BQ02880 1626 aa39.62■■■■□ 3.93
CDC16-211ENST00000628084 EEA1Q15075 1411 aa39.61■■■■□ 3.93
CDC16-211ENST00000628084 BIVM-ERCC5R4GMW8 1640 aa39.55■■■■□ 3.92
CDC16-211ENST00000628084 RUSC2Q8N2Y8 1516 aa39.5■■■■□ 3.91
CDC16-211ENST00000628084 CUX1P39880 1505 aa39.44■■■■□ 3.9
CDC16-211ENST00000628084 CSRNP3Q8WYN3 585 aa39.44■■■■□ 3.9
CDC16-211ENST00000628084 DNAJC5BQ9UF47 199 aa39.29■■■■□ 3.88
CDC16-211ENST00000628084 FANCD2Q9BXW9 1451 aa39.29■■■■□ 3.88
CDC16-211ENST00000628084 NESP48681 1621 aa39.29■■■■□ 3.88
CDC16-211ENST00000628084 LAMC3Q9Y6N6 1575 aa39.26■■■■□ 3.87
CDC16-211ENST00000628084 GOLGA3Q08378 1498 aa39.1■■■■□ 3.85
CDC16-211ENST00000628084 CEP164Q9UPV0 1460 aa39.08■■■■□ 3.85
CDC16-211ENST00000628084 KIF21BO75037 1637 aa39.06■■■■□ 3.84
CDC16-211ENST00000628084 TNIKQ9UKE5 1360 aa39.05■■■■□ 3.84
CDC16-211ENST00000628084 UBTFP17480 764 aaKnown RBP39.05■■■■□ 3.84
CDC16-211ENST00000628084 KIF27Q86VH2 1401 aa39■■■■□ 3.83
CDC16-211ENST00000628084 PDS5BQ9NTI5 1447 aa39■■■■□ 3.83
CDC16-211ENST00000628084 FGD5Q6ZNL6 1462 aa38.98■■■■□ 3.83
CDC16-211ENST00000628084 DNMBPQ6XZF7 1577 aa38.96■■■■□ 3.83
CDC16-211ENST00000628084 CEP162Q5TB80 1403 aa38.9■■■■□ 3.82
CDC16-211ENST00000628084 TOPBP1Q92547 1522 aa38.88■■■■□ 3.82
CDC16-211ENST00000628084 RAPGEF2Q9Y4G8 1499 aa38.84■■■■□ 3.81
CDC16-211ENST00000628084 CUX2O14529 1486 aa38.82■■■■□ 3.8
CDC16-211ENST00000628084 KIF21AQ7Z4S6 1674 aa38.77■■■■□ 3.8
CDC16-211ENST00000628084 PRXQ9BXM0 1461 aa38.77■■■■□ 3.8
CDC16-211ENST00000628084 PCGF6Q9BYE7 350 aa38.77■■■■□ 3.8
CDC16-211ENST00000628084 URB2Q14146 1524 aaKnown RBP38.76■■■■□ 3.79
CDC16-211ENST00000628084 POLA1P09884 1462 aaPredicted RBP38.73■■■■□ 3.79
CDC16-211ENST00000628084 ERICH3Q5RHP9 1530 aa38.73■■■■□ 3.79
CDC16-211ENST00000628084 RAD54L2Q9Y4B4 1467 aa38.65■■■■□ 3.78
CDC16-211ENST00000628084 TRIM26Q12899 539 aaPredicted RBP38.62■■■■□ 3.77
CDC16-211ENST00000628084 ABCA10Q8WWZ4 1543 aa38.61■■■■□ 3.77
CDC16-211ENST00000628084 IGF1RP08069 1367 aa38.6■■■■□ 3.77
CDC16-211ENST00000628084 CLIP1P30622 1438 aa38.53■■■■□ 3.76
CDC16-211ENST00000628084 CARMIL1Q5VZK9 1371 aa38.44■■■■□ 3.74
CDC16-211ENST00000628084 MRC2Q9UBG0 1479 aa38.43■■■■□ 3.74
CDC16-211ENST00000628084 WDR97A6NE52 1622 aa38.4■■■■□ 3.74
CDC16-211ENST00000628084 RANGAP1P46060 587 aaPredicted RBP38.39■■■■□ 3.74
CDC16-211ENST00000628084 PPARGC1BQ86YN6 1023 aaKnown RBP38.34■■■■□ 3.73
CDC16-211ENST00000628084 TDRD9Q8NDG6 1382 aaKnown RBP38.28■■■■□ 3.72
CDC16-211ENST00000628084 ERCC6Q03468 1493 aa38.25■■■■□ 3.71
CDC16-211ENST00000628084 TARBP1Q13395 1621 aaKnown RBP38.25■■■■□ 3.71
CDC16-211ENST00000628084 ABCA5Q8WWZ7 1642 aa38.25■■■■□ 3.71
CDC16-211ENST00000628084 CUL7Q14999 1698 aa38.23■■■■□ 3.71
CDC16-211ENST00000628084 GAPVD1Q14C86 1478 aa38.22■■■■□ 3.71
CDC16-211ENST00000628084 VPS8Q8N3P4 1428 aa38.21■■■■□ 3.71
CDC16-211ENST00000628084 WDR62O43379 1518 aa38.19■■■■□ 3.7
CDC16-211ENST00000628084 ARAP1Q96P48 1450 aa38.05■■■■□ 3.68
CDC16-211ENST00000628084 IFT140Q96RY7 1462 aa38.02■■■■□ 3.68
CDC16-211ENST00000628084 TTBK1Q5TCY1 1321 aaPredicted RBP38■■■■□ 3.67
CDC16-211ENST00000628084 ARHGAP35Q9NRY4 1499 aa37.99■■■■□ 3.67
CDC16-211ENST00000628084 THOC2Q8NI27 1593 aaKnown RBP37.99■■■■□ 3.67
CDC16-211ENST00000628084 APLP2Q06481 763 aa37.98■■■■□ 3.67
CDC16-211ENST00000628084 AQRO60306 1485 aaKnown RBP eCLIP37.96■■■■□ 3.672e-7■■■■■ 38.5
CDC16-211ENST00000628084 PBRM1Q86U86 1689 aa37.93■■■■□ 3.66
CDC16-211ENST00000628084 CTTNBP2Q8WZ74 1663 aa37.87■■■■□ 3.65
CDC16-211ENST00000628084 HRCP23327 699 aa37.86■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms