Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFBO76075 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.95■□□□□ 0.78
DFFBO76075 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DFFBO76075 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DFFBO76075 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DFFBO76075 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DFFBO76075 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DFFBO76075 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DFFBO76075 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.94■□□□□ 0.78
DFFBO76075 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DFFBO76075 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DFFBO76075 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DFFBO76075 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.93■□□□□ 0.78
DFFBO76075 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.93■□□□□ 0.78
DFFBO76075 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFBO76075 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFBO76075 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DFFBO76075 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.92■□□□□ 0.78
DFFBO76075 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFBO76075 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
DFFBO76075 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFBO76075 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.92■□□□□ 0.78
DFFBO76075 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFBO76075 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
DFFBO76075 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DFFBO76075 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
DFFBO76075 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DFFBO76075 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.91■□□□□ 0.78
DFFBO76075 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DFFBO76075 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.9■□□□□ 0.78
DFFBO76075 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DFFBO76075 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
DFFBO76075 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
DFFBO76075 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DFFBO76075 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
DFFBO76075 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
DFFBO76075 AC005559.1-201ENST00000589661 871 ntBASIC19.89■□□□□ 0.77
DFFBO76075 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFBO76075 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DFFBO76075 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.88■□□□□ 0.77
DFFBO76075 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFBO76075 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.88■□□□□ 0.77
DFFBO76075 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.88■□□□□ 0.77
DFFBO76075 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DFFBO76075 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DFFBO76075 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DFFBO76075 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DFFBO76075 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.87■□□□□ 0.77
DFFBO76075 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.87■□□□□ 0.77
DFFBO76075 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DFFBO76075 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFBO76075 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFBO76075 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFBO76075 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.86■□□□□ 0.77
DFFBO76075 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DFFBO76075 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFBO76075 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFBO76075 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFBO76075 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
DFFBO76075 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFBO76075 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFBO76075 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.85■□□□□ 0.77
DFFBO76075 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.85■□□□□ 0.77
DFFBO76075 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFBO76075 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DFFBO76075 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFBO76075 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFBO76075 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
DFFBO76075 AP004609.3-201ENST00000610705 1884 ntBASIC19.84■□□□□ 0.77
DFFBO76075 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFBO76075 AP006261.1-201ENST00000584783 668 ntBASIC19.84■□□□□ 0.77
DFFBO76075 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DFFBO76075 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DFFBO76075 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.83■□□□□ 0.76
DFFBO76075 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DFFBO76075 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.82■□□□□ 0.76
DFFBO76075 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DFFBO76075 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DFFBO76075 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DFFBO76075 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DFFBO76075 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DFFBO76075 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DFFBO76075 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DFFBO76075 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.81■□□□□ 0.76
DFFBO76075 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DFFBO76075 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DFFBO76075 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DFFBO76075 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
DFFBO76075 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
DFFBO76075 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DFFBO76075 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.8■□□□□ 0.76
DFFBO76075 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.8■□□□□ 0.76
DFFBO76075 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.79■□□□□ 0.76
DFFBO76075 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
DFFBO76075 ERN1-208ENST00000606895 2068 ntBASIC19.79■□□□□ 0.76
DFFBO76075 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.79■□□□□ 0.76
DFFBO76075 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
DFFBO76075 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.79■□□□□ 0.76
DFFBO76075 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DFFBO76075 MIR3665-201ENST00000578708 105 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms