Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-6A0A0B4J262 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-6A0A0B4J262 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 CLDN5-201ENST00000403084 2357 ntBASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-6A0A0B4J262 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV8-6A0A0B4J262 LINC00543-201ENST00000567234 1845 ntBASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV8-6A0A0B4J262 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV8-6A0A0B4J262 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV8-6A0A0B4J262 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-6A0A0B4J262 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
TRAV8-6A0A0B4J262 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-6A0A0B4J262 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV8-6A0A0B4J262 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-6A0A0B4J262 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 RPS2P35-201ENST00000443417 897 ntBASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-6A0A0B4J262 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-6A0A0B4J262 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-6A0A0B4J262 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRAV8-6A0A0B4J262 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-6A0A0B4J262 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-6A0A0B4J262 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV8-6A0A0B4J262 MIR6090-201ENST00000622481 60 ntBASIC17.84■□□□□ 0.45
TRAV8-6A0A0B4J262 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-6A0A0B4J262 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV8-6A0A0B4J262 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-6A0A0B4J262 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-6A0A0B4J262 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-6A0A0B4J262 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-6A0A0B4J262 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-6A0A0B4J262 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 AC127502.1-201ENST00000399971 1502 ntBASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-6A0A0B4J262 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-6A0A0B4J262 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRAV8-6A0A0B4J262 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-6A0A0B4J262 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-6A0A0B4J262 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-6A0A0B4J262 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-6A0A0B4J262 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-6A0A0B4J262 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-6A0A0B4J262 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms