RNA–Protein interactions for RNA: ENST00000406818.7

DTNB-208, Transcript of dystrobrevin beta, human

APPRIS P4 TSL 1 (best) BASIC

Gene DTNB, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DTNB-208	ENST00000406818	NISCH	Q9Y2I1	1504 aa		43.85	■■■■■ 4.61
DTNB-208	ENST00000406818	SHROOM4	Q9ULL8	1493 aa		38.32	■■■■□ 3.72
DTNB-208	ENST00000406818	SUPT5H	O00267	1087 aa	Known RBP	37.95	■■■■□ 3.67
DTNB-208	ENST00000406818	HRC	P23327	699 aa		37.42	■■■■□ 3.58
DTNB-208	ENST00000406818	MYO15B	Q96JP2	1530 aa		37.29	■■■■□ 3.56
DTNB-208	ENST00000406818	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.22	■■■■□ 3.55
DTNB-208	ENST00000406818	CHIC1	Q5VXU3	224 aa		37.18	■■■■□ 3.54
DTNB-208	ENST00000406818	PCGF6	Q9BYE7	350 aa		36.96	■■■■□ 3.51
DTNB-208	ENST00000406818	PPARGC1B	Q86YN6	1023 aa	Known RBP	36.7	■■■■□ 3.47
DTNB-208	ENST00000406818	CCDC180	Q9P1Z9	1646 aa		36.7	■■■■□ 3.47
DTNB-208	ENST00000406818	DCAF8L2	P0C7V8	631 aa		36.5	■■■■□ 3.43
DTNB-208	ENST00000406818	DCAF1	Q9Y4B6	1507 aa		36.32	■■■■□ 3.4
DTNB-208	ENST00000406818	LOC105371045	A0A1W2PR82	267 aa		36.27	■■■■□ 3.4
DTNB-208	ENST00000406818	TRIM26	Q12899	539 aa	Predicted RBP	35.92	■■■■□ 3.34
DTNB-208	ENST00000406818	ZEB1	P37275	1124 aa	Predicted RBP	35.4	■■■■□ 3.26
DTNB-208	ENST00000406818	ABCC9	O60706	1549 aa		35.26	■■■■□ 3.24
DTNB-208	ENST00000406818	TRIM41	Q8WV44	630 aa		35.17	■■■■□ 3.22
DTNB-208	ENST00000406818	PELP1	Q8IZL8	1130 aa	Known RBP	35.11	■■■■□ 3.21
DTNB-208	ENST00000406818	RSF1	Q96T23	1441 aa	Predicted RBP	35.09	■■■■□ 3.21
DTNB-208	ENST00000406818	FAM9A	Q8IZU1	332 aa	Predicted RBP	35.09	■■■■□ 3.21
DTNB-208	ENST00000406818	SCAF1	Q9H7N4	1312 aa	Known RBP	35.08	■■■■□ 3.21
DTNB-208	ENST00000406818	EHMT2	Q96KQ7	1210 aa		34.91	■■■■□ 3.18
DTNB-208	ENST00000406818	RB1CC1	Q8TDY2	1594 aa		34.86	■■■■□ 3.17
DTNB-208	ENST00000406818	SCRIB	Q14160	1630 aa		34.83	■■■■□ 3.17
DTNB-208	ENST00000406818	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	34.47	■■■■□ 3.11
DTNB-208	ENST00000406818	ACIN1	Q9UKV3	1341 aa	Known RBP	34.4	■■■■□ 3.1
DTNB-208	ENST00000406818	CCER1	Q8TC90	406 aa	Predicted RBP	34.36	■■■■□ 3.09
DTNB-208	ENST00000406818	NEUROD1	Q13562	356 aa		34.35	■■■■□ 3.09
DTNB-208	ENST00000406818	CECR2	Q9BXF3	1484 aa		34.31	■■■■□ 3.08
DTNB-208	ENST00000406818	MROH2B	Q7Z745	1585 aa		34.23	■■■■□ 3.07
DTNB-208	ENST00000406818	DIEXF	Q68CQ4	756 aa	Known RBP	34.14	■■■■□ 3.06
DTNB-208	ENST00000406818	WIZ	O95785	1651 aa		34.09	■■■■□ 3.05
DTNB-208	ENST00000406818	GTF3C3	Q9Y5Q9	886 aa		34.08	■■■■□ 3.05
DTNB-208	ENST00000406818	CENPB	P07199	599 aa	Predicted RBP	33.99	■■■■□ 3.03
DTNB-208	ENST00000406818	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.96	■■■■□ 3.03
DTNB-208	ENST00000406818	EIF4G1	Q04637	1599 aa	Known RBP	33.87	■■■■□ 3.01
DTNB-208	ENST00000406818	NACAD	O15069	1562 aa		33.82	■■■■□ 3
DTNB-208	ENST00000406818	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	33.81	■■■■□ 3
DTNB-208	ENST00000406818	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.8	■■■■□ 3
DTNB-208	ENST00000406818	CEP162	Q5TB80	1403 aa		33.71	■■■□□ 2.99
DTNB-208	ENST00000406818	CCDC88B	A6NC98	1476 aa		33.7	■■■□□ 2.98
DTNB-208	ENST00000406818	ABCC8	Q09428	1581 aa		33.68	■■■□□ 2.98
DTNB-208	ENST00000406818	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.63	■■■□□ 2.97
DTNB-208	ENST00000406818	SOGA1	O94964	1423 aa		33.55	■■■□□ 2.96
DTNB-208	ENST00000406818	TNIK	Q9UKE5	1360 aa		33.54	■■■□□ 2.96
DTNB-208	ENST00000406818	MYT1	Q01538	1121 aa		33.52	■■■□□ 2.96
DTNB-208	ENST00000406818	YTHDC1	Q96MU7	727 aa	Known RBP	33.51	■■■□□ 2.95
DTNB-208	ENST00000406818	TOP2A	P11388	1531 aa	Known RBP	33.43	■■■□□ 2.94
DTNB-208	ENST00000406818	UBTF	P17480	764 aa	Known RBP	33.42	■■■□□ 2.94
DTNB-208	ENST00000406818	CSRNP3	Q8WYN3	585 aa		33.39	■■■□□ 2.94
DTNB-208	ENST00000406818	RUSC2	Q8N2Y8	1516 aa		33.38	■■■□□ 2.93
DTNB-208	ENST00000406818	MIER1	Q8N108	512 aa		33.35	■■■□□ 2.93
DTNB-208	ENST00000406818	SMARCA2	P51531	1590 aa		33.33	■■■□□ 2.93
DTNB-208	ENST00000406818	EEA1	Q15075	1411 aa		33.27	■■■□□ 2.92
DTNB-208	ENST00000406818	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.23	■■■□□ 2.91
DTNB-208	ENST00000406818	SMARCA4	P51532	1647 aa		33.21	■■■□□ 2.91
DTNB-208	ENST00000406818	GOLGA3	Q08378	1498 aa		33.18	■■■□□ 2.9
DTNB-208	ENST00000406818	CLIP1	P30622	1438 aa		32.9	■■■□□ 2.86
DTNB-208	ENST00000406818	CEP164	Q9UPV0	1460 aa		32.89	■■■□□ 2.86
DTNB-208	ENST00000406818	VPS8	Q8N3P4	1428 aa		32.82	■■■□□ 2.84
DTNB-208	ENST00000406818	KIF21B	O75037	1637 aa		32.8	■■■□□ 2.84
DTNB-208	ENST00000406818	APLP2	Q06481	763 aa		32.78	■■■□□ 2.84
DTNB-208	ENST00000406818	SYNJ1	O43426	1573 aa		32.75	■■■□□ 2.83
DTNB-208	ENST00000406818	UNC13A	Q9UPW8	1703 aa		32.74	■■■□□ 2.83
DTNB-208	ENST00000406818	RANGAP1	P46060	587 aa	Predicted RBP	32.72	■■■□□ 2.83
DTNB-208	ENST00000406818	RAPGEF2	Q9Y4G8	1499 aa		32.65	■■■□□ 2.82
DTNB-208	ENST00000406818	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.6	■■■□□ 2.81
DTNB-208	ENST00000406818	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.59	■■■□□ 2.81
DTNB-208	ENST00000406818	DHX57	Q6P158	1386 aa	Known RBP	32.57	■■■□□ 2.8
DTNB-208	ENST00000406818	CLSPN	Q9HAW4	1339 aa		32.53	■■■□□ 2.8
DTNB-208	ENST00000406818	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.51	■■■□□ 2.8
DTNB-208	ENST00000406818	PEG3	Q9GZU2	1588 aa		32.42	■■■□□ 2.78
DTNB-208	ENST00000406818	KANK4	Q5T7N3	995 aa	Predicted RBP	32.36	■■■□□ 2.77
DTNB-208	ENST00000406818	BICRA	Q9NZM4	1560 aa		32.31	■■■□□ 2.76
DTNB-208	ENST00000406818	TSHZ2	Q9NRE2	1034 aa		32.3	■■■□□ 2.76
DTNB-208	ENST00000406818	ARAP1	Q96P48	1450 aa		32.28	■■■□□ 2.76
DTNB-208	ENST00000406818	ATAD2B	Q9ULI0	1458 aa		32.21	■■■□□ 2.75
DTNB-208	ENST00000406818	TOP2B	Q02880	1626 aa		32.18	■■■□□ 2.74
DTNB-208	ENST00000406818	KCNH8	Q96L42	1107 aa		32.18	■■■□□ 2.74
DTNB-208	ENST00000406818	RRBP1	Q9P2E9	1410 aa	Known RBP	32.17	■■■□□ 2.74
DTNB-208	ENST00000406818	PRX	Q9BXM0	1461 aa		32.14	■■■□□ 2.74
DTNB-208	ENST00000406818	ERICH3	Q5RHP9	1530 aa		32.12	■■■□□ 2.73
DTNB-208	ENST00000406818	CUX2	O14529	1486 aa		32.08	■■■□□ 2.73
DTNB-208	ENST00000406818	ITGAE	P38570	1179 aa		32.07	■■■□□ 2.72
DTNB-208	ENST00000406818	ANP32E	Q9BTT0	268 aa		32.05	■■■□□ 2.72
DTNB-208	ENST00000406818	CCNB3	Q8WWL7	1395 aa		32.04	■■■□□ 2.72
DTNB-208	ENST00000406818	BIVM-ERCC5	R4GMW8	1640 aa		32.01	■■■□□ 2.72
DTNB-208	ENST00000406818	BCAN	Q96GW7	911 aa		31.98	■■■□□ 2.71
DTNB-208	ENST00000406818	RAB3GAP2	Q9H2M9	1393 aa		31.91	■■■□□ 2.7
DTNB-208	ENST00000406818	MAPKBP1	O60336	1514 aa		31.88	■■■□□ 2.69
DTNB-208	ENST00000406818	FKBP8	Q14318	412 aa		31.87	■■■□□ 2.69
DTNB-208	ENST00000406818	ARHGAP35	Q9NRY4	1499 aa		31.86	■■■□□ 2.69
DTNB-208	ENST00000406818	DDX10	Q13206	875 aa	Known RBP	31.84	■■■□□ 2.69
DTNB-208	ENST00000406818	KIF27	Q86VH2	1401 aa		31.8	■■■□□ 2.68
DTNB-208	ENST00000406818	CUX1	P39880	1505 aa		31.78	■■■□□ 2.68
DTNB-208	ENST00000406818	SIN3A	Q96ST3	1273 aa		31.75	■■■□□ 2.67
DTNB-208	ENST00000406818	WDR97	A6NE52	1622 aa		31.73	■■■□□ 2.67
DTNB-208	ENST00000406818	SETD5	Q9C0A6	1442 aa		31.7	■■■□□ 2.67
DTNB-208	ENST00000406818	PPP1R15A	O75807	674 aa	Predicted RBP	31.67	■■■□□ 2.66
DTNB-208	ENST00000406818	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.63	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms