RNA–Protein interactions for RNA: ENST00000173229.6

NTN1-201, Transcript of netrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NTN1, Length 5,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTN1-201ENST00000173229 DCAF8L2P0C7V8 631 aa36.18■■■■□ 3.38
NTN1-201ENST00000173229 SUPT5HO00267 1087 aaKnown RBP34.29■■■■□ 3.08
NTN1-201ENST00000173229 EHMT2Q96KQ7 1210 aa33.99■■■■□ 3.03
NTN1-201ENST00000173229 SHROOM4Q9ULL8 1493 aa33.57■■■□□ 2.96
NTN1-201ENST00000173229 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
NTN1-201ENST00000173229 PELP1Q8IZL8 1130 aaKnown RBP33.17■■■□□ 2.9
NTN1-201ENST00000173229 FAM9AQ8IZU1 332 aaPredicted RBP32.96■■■□□ 2.87
NTN1-201ENST00000173229 APLP2Q06481 763 aa32.93■■■□□ 2.86
NTN1-201ENST00000173229 TTBK1Q5TCY1 1321 aaPredicted RBP32.81■■■□□ 2.84
NTN1-201ENST00000173229 PCGF6Q9BYE7 350 aa32.55■■■□□ 2.8
NTN1-201ENST00000173229 ERICH6Q7L0X2 663 aa32.25■■■□□ 2.75
NTN1-201ENST00000173229 RANGAP1P46060 587 aaPredicted RBP32.2■■■□□ 2.75
NTN1-201ENST00000173229 CENPBP07199 599 aaPredicted RBP31.99■■■□□ 2.71
NTN1-201ENST00000173229 CCER1Q8TC90 406 aaPredicted RBP31.84■■■□□ 2.69
NTN1-201ENST00000173229 YTHDC1Q96MU7 727 aaKnown RBP31.82■■■□□ 2.68
NTN1-201ENST00000173229 ATP1B4Q9UN42 357 aaPredicted RBP31.71■■■□□ 2.67
NTN1-201ENST00000173229 ZEB1P37275 1124 aaPredicted RBP31.52■■■□□ 2.64
NTN1-201ENST00000173229 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
NTN1-201ENST00000173229 PPARGC1BQ86YN6 1023 aaKnown RBP31.42■■■□□ 2.62
NTN1-201ENST00000173229 NEFLP07196 543 aa31.35■■■□□ 2.61
NTN1-201ENST00000173229 UBTFP17480 764 aaKnown RBP31.32■■■□□ 2.6
NTN1-201ENST00000173229 MYT1Q01538 1121 aa31.2■■■□□ 2.58
NTN1-201ENST00000173229 MYT1LQ9UL68 1186 aa30.88■■■□□ 2.53
NTN1-201ENST00000173229 CNGB1Q14028 1251 aaPredicted RBP30.73■■■□□ 2.51
NTN1-201ENST00000173229 POLR3GLQ9BT43 218 aa30.72■■■□□ 2.51
NTN1-201ENST00000173229 ITGAEP38570 1179 aa30.71■■■□□ 2.51
NTN1-201ENST00000173229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.7■■■□□ 2.5
NTN1-201ENST00000173229 HNRNPUL2Q1KMD3 747 aaKnown RBP30.7■■■□□ 2.5
NTN1-201ENST00000173229 HRCP23327 699 aa30.67■■■□□ 2.5
NTN1-201ENST00000173229 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
NTN1-201ENST00000173229 DAXXQ9UER7 740 aaPredicted RBP30.61■■■□□ 2.49
NTN1-201ENST00000173229 LOC105371045A0A1W2PR82 267 aa30.42■■■□□ 2.46
NTN1-201ENST00000173229 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
NTN1-201ENST00000173229 SLC4A1APQ9BWU0 796 aaKnown RBP30.03■■■□□ 2.4
NTN1-201ENST00000173229 DIEXFQ68CQ4 756 aaKnown RBP29.99■■■□□ 2.39
NTN1-201ENST00000173229 RTL5Q5HYW3 569 aaPredicted RBP29.99■■■□□ 2.39
NTN1-201ENST00000173229 BCANQ96GW7 911 aa29.97■■■□□ 2.39
NTN1-201ENST00000173229 ZNF316A6NFI3 1004 aaPredicted RBP29.94■■■□□ 2.38
NTN1-201ENST00000173229 CLSPNQ9HAW4 1339 aa29.92■■■□□ 2.38
NTN1-201ENST00000173229 GTF3C3Q9Y5Q9 886 aa29.74■■■□□ 2.35
NTN1-201ENST00000173229 NEUROD1Q13562 356 aa29.6■■■□□ 2.33
NTN1-201ENST00000173229 FAM50AQ14320 339 aaKnown RBP29.6■■■□□ 2.33
NTN1-201ENST00000173229 TRIM52Q96A61 297 aa29.57■■■□□ 2.32
NTN1-201ENST00000173229 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
NTN1-201ENST00000173229 BCL11AQ9H165 835 aa29.45■■■□□ 2.3
NTN1-201ENST00000173229 ABCC9O60706 1549 aa29.41■■■□□ 2.3
NTN1-201ENST00000173229 ZNF326Q5BKZ1 582 aaKnown RBP29.38■■■□□ 2.29
NTN1-201ENST00000173229 FBLN2P98095 1184 aa29.37■■■□□ 2.29
NTN1-201ENST00000173229 CDK11AQ9UQ88 783 aaPredicted RBP29.33■■■□□ 2.29
NTN1-201ENST00000173229 ZBTB47Q9UFB7 747 aaPredicted RBP29.29■■■□□ 2.28
NTN1-201ENST00000173229 ANP32CO43423 234 aa29.23■■■□□ 2.27
NTN1-201ENST00000173229 NEFMP07197 916 aa29.11■■■□□ 2.25
NTN1-201ENST00000173229 SLC24A1O60721 1099 aa29.09■■■□□ 2.25
NTN1-201ENST00000173229 NPM2Q86SE8 214 aaKnown RBP29.07■■■□□ 2.24
NTN1-201ENST00000173229 ACIN1Q9UKV3 1341 aaKnown RBP29.01■■■□□ 2.23
NTN1-201ENST00000173229 CANXP27824 592 aaKnown RBP29.01■■■□□ 2.23
NTN1-201ENST00000173229 ARID3CA6NKF2 412 aa28.99■■■□□ 2.23
NTN1-201ENST00000173229 ESF1Q9H501 851 aaKnown RBP28.96■■■□□ 2.23
NTN1-201ENST00000173229 EIF5BO60841 1220 aaKnown RBP28.92■■■□□ 2.22
NTN1-201ENST00000173229 ANP32AP39687 249 aaKnown RBP28.85■■■□□ 2.21
NTN1-201ENST00000173229 P3H3Q8IVL6 736 aa28.85■■■□□ 2.21
NTN1-201ENST00000173229 FKBP8Q14318 412 aa28.76■■■□□ 2.2
NTN1-201ENST00000173229 ZNF777Q9ULD5 760 aaPredicted RBP28.76■■■□□ 2.19
NTN1-201ENST00000173229 NPM1P06748 294 aaKnown RBP eCLIP28.7■■■□□ 2.19
NTN1-201ENST00000173229 STAG3Q9UJ98 1225 aa28.68■■■□□ 2.18
NTN1-201ENST00000173229 NBR1Q14596 966 aa28.58■■■□□ 2.17
NTN1-201ENST00000173229 SALL2Q9Y467 1007 aaPredicted RBP28.56■■■□□ 2.16
NTN1-201ENST00000173229 ARXQ96QS3 562 aa28.55■■■□□ 2.16
NTN1-201ENST00000173229 CSRNP3Q8WYN3 585 aa28.53■■■□□ 2.16
NTN1-201ENST00000173229 CHGAP10645 457 aaKnown RBP28.52■■■□□ 2.16
NTN1-201ENST00000173229 FAM9BQ8IZU0 186 aa28.47■■■□□ 2.15
NTN1-201ENST00000173229 HNRNPUQ00839 825 aaKnown RBP eCLIP28.47■■■□□ 2.15
NTN1-201ENST00000173229 HSP90AA1P07900 732 aaKnown RBP28.45■■■□□ 2.15
NTN1-201ENST00000173229 PLPPR3Q6T4P5 718 aa28.43■■■□□ 2.14
NTN1-201ENST00000173229 DDX10Q13206 875 aaKnown RBP28.41■■■□□ 2.14
NTN1-201ENST00000173229 ANP32BQ92688 251 aaKnown RBP28.38■■■□□ 2.13
NTN1-201ENST00000173229 IRX6P78412 446 aaPredicted RBP28.32■■■□□ 2.12
NTN1-201ENST00000173229 TONSLQ96HA7 1378 aa28.26■■■□□ 2.12
NTN1-201ENST00000173229 SCAF1Q9H7N4 1312 aaKnown RBP28.22■■■□□ 2.11
NTN1-201ENST00000173229 CCDC136Q96JN2 1154 aa28.2■■■□□ 2.1
NTN1-201ENST00000173229 UPF2Q9HAU5 1272 aaKnown RBP28.2■■■□□ 2.1
NTN1-201ENST00000173229 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
NTN1-201ENST00000173229 HIRIP3Q9BW71 556 aaPredicted RBP28.13■■■□□ 2.09
NTN1-201ENST00000173229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.12■■■□□ 2.09
NTN1-201ENST00000173229 CHIC2Q9UKJ5 165 aa28.1■■■□□ 2.09
NTN1-201ENST00000173229 TSPY4P0CV99 314 aa28.09■■■□□ 2.09
NTN1-201ENST00000173229 TSPY10P0CW01 314 aa28.09■■■□□ 2.09
NTN1-201ENST00000173229 SENP3Q9H4L4 574 aaPredicted RBP28.08■■■□□ 2.09
NTN1-201ENST00000173229 GLIPR1L2Q4G1C9 344 aa28.07■■■□□ 2.08
NTN1-201ENST00000173229 MIER1Q8N108 512 aa28.04■■■□□ 2.08
NTN1-201ENST00000173229 SENP3-EIF4A1A0A087X0R7 540 aa28.03■■■□□ 2.08
NTN1-201ENST00000173229 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
NTN1-201ENST00000173229 TMC1Q8TDI8 760 aa28.02■■■□□ 2.08
NTN1-201ENST00000173229 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.98■■■□□ 2.07
NTN1-201ENST00000173229 KDM2AQ9Y2K7 1162 aa27.96■■■□□ 2.07
NTN1-201ENST00000173229 WDR43Q15061 677 aaKnown RBP eCLIP27.95■■■□□ 2.06
NTN1-201ENST00000173229 MRS2Q9HD23 443 aa27.95■■■□□ 2.06
NTN1-201ENST00000173229 PLEKHG5O94827 1062 aa27.9■■■□□ 2.06
NTN1-201ENST00000173229 A0A0G2JS52 829 aa27.89■■■□□ 2.06
NTN1-201ENST00000173229 MTUS2Q5JR59 1369 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms