RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 NISCHQ9Y2I1 1504 aa46.05■■■■■ 4.96
THRA-201ENST00000264637 SHROOM4Q9ULL8 1493 aa39.87■■■■□ 3.97
THRA-201ENST00000264637 SUPT5HO00267 1087 aaKnown RBP39.28■■■■□ 3.88
THRA-201ENST00000264637 ZCCHC6Q5VYS8 1495 aaKnown RBP39.01■■■■□ 3.84
THRA-201ENST00000264637 CCDC180Q9P1Z9 1646 aa38.78■■■■□ 3.8
THRA-201ENST00000264637 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
THRA-201ENST00000264637 MYO15BQ96JP2 1530 aa38.32■■■■□ 3.73
THRA-201ENST00000264637 CHIC1Q5VXU3 224 aa38.3■■■■□ 3.72
THRA-201ENST00000264637 HRCP23327 699 aa37.83■■■■□ 3.65
THRA-201ENST00000264637 PCGF6Q9BYE7 350 aa37.63■■■■□ 3.62
THRA-201ENST00000264637 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
THRA-201ENST00000264637 LOC105371045A0A1W2PR82 267 aa37.32■■■■□ 3.57
THRA-201ENST00000264637 PPARGC1BQ86YN6 1023 aaKnown RBP37.17■■■■□ 3.54
THRA-201ENST00000264637 ABCC9O60706 1549 aa36.88■■■■□ 3.49
THRA-201ENST00000264637 SCRIBQ14160 1630 aa36.68■■■■□ 3.46
THRA-201ENST00000264637 RSF1Q96T23 1441 aaPredicted RBP36.68■■■■□ 3.46
THRA-201ENST00000264637 TRIM26Q12899 539 aaPredicted RBP36.67■■■■□ 3.46
THRA-201ENST00000264637 TRIM41Q8WV44 630 aa36.44■■■■□ 3.42
THRA-201ENST00000264637 RB1CC1Q8TDY2 1594 aa36.38■■■■□ 3.42
THRA-201ENST00000264637 FAM9AQ8IZU1 332 aaPredicted RBP36.33■■■■□ 3.41
THRA-201ENST00000264637 EHMT2Q96KQ7 1210 aa36.13■■■■□ 3.38
THRA-201ENST00000264637 CECR2Q9BXF3 1484 aa36.04■■■■□ 3.36
THRA-201ENST00000264637 ZEB1P37275 1124 aaPredicted RBP35.94■■■■□ 3.34
THRA-201ENST00000264637 MROH2BQ7Z745 1585 aa35.91■■■■□ 3.34
THRA-201ENST00000264637 NACADO15069 1562 aa35.81■■■■□ 3.32
THRA-201ENST00000264637 WIZO95785 1651 aa35.75■■■■□ 3.31
THRA-201ENST00000264637 BAZ1AQ9NRL2 1556 aaPredicted RBP35.43■■■■□ 3.26
THRA-201ENST00000264637 PELP1Q8IZL8 1130 aaKnown RBP35.38■■■■□ 3.25
THRA-201ENST00000264637 EIF4G1Q04637 1599 aaKnown RBP35.35■■■■□ 3.25
THRA-201ENST00000264637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.28■■■■□ 3.24
THRA-201ENST00000264637 SCAF1Q9H7N4 1312 aaKnown RBP35.2■■■■□ 3.23
THRA-201ENST00000264637 ABCC8Q09428 1581 aa35.16■■■■□ 3.22
THRA-201ENST00000264637 CCER1Q8TC90 406 aaPredicted RBP35.13■■■■□ 3.21
THRA-201ENST00000264637 CCDC88BA6NC98 1476 aa35.11■■■■□ 3.21
THRA-201ENST00000264637 TOP2AP11388 1531 aaKnown RBP35.07■■■■□ 3.2
THRA-201ENST00000264637 TTBK1Q5TCY1 1321 aaPredicted RBP35.05■■■■□ 3.2
THRA-201ENST00000264637 SMARCA4P51532 1647 aa34.97■■■■□ 3.19
THRA-201ENST00000264637 SMARCA2P51531 1590 aa34.94■■■■□ 3.18
THRA-201ENST00000264637 SOGA1O94964 1423 aa34.93■■■■□ 3.18
THRA-201ENST00000264637 CEP162Q5TB80 1403 aa34.9■■■■□ 3.18
THRA-201ENST00000264637 WRNQ14191 1432 aaPredicted RBP eCLIP34.87■■■■□ 3.17
THRA-201ENST00000264637 RUSC2Q8N2Y8 1516 aa34.77■■■■□ 3.16
THRA-201ENST00000264637 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
THRA-201ENST00000264637 TNIKQ9UKE5 1360 aa34.75■■■■□ 3.15
THRA-201ENST00000264637 CSRNP3Q8WYN3 585 aa34.71■■■■□ 3.15
THRA-201ENST00000264637 UBTFP17480 764 aaKnown RBP34.69■■■■□ 3.14
THRA-201ENST00000264637 DIEXFQ68CQ4 756 aaKnown RBP34.66■■■■□ 3.14
THRA-201ENST00000264637 NEUROD1Q13562 356 aa34.65■■■■□ 3.14
THRA-201ENST00000264637 ACIN1Q9UKV3 1341 aaKnown RBP34.64■■■■□ 3.14
THRA-201ENST00000264637 EEA1Q15075 1411 aa34.57■■■■□ 3.12
THRA-201ENST00000264637 PABPN1Q86U42 306 aaKnown RBP eCLIP34.52■■■■□ 3.12
THRA-201ENST00000264637 GOLGA3Q08378 1498 aa34.46■■■■□ 3.11
THRA-201ENST00000264637 GTF3C3Q9Y5Q9 886 aa34.32■■■■□ 3.08
THRA-201ENST00000264637 BICRAQ9NZM4 1560 aa34.3■■■■□ 3.08
THRA-201ENST00000264637 CENPBP07199 599 aaPredicted RBP34.3■■■■□ 3.08
THRA-201ENST00000264637 SYNJ1O43426 1573 aa34.26■■■■□ 3.08
THRA-201ENST00000264637 ZNF316A6NFI3 1004 aaPredicted RBP34.26■■■■□ 3.08
THRA-201ENST00000264637 HNRNPUL2Q1KMD3 747 aaKnown RBP34.24■■■■□ 3.07
THRA-201ENST00000264637 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.07
THRA-201ENST00000264637 PEG3Q9GZU2 1588 aa34.18■■■■□ 3.06
THRA-201ENST00000264637 CLIP1P30622 1438 aa34.15■■■■□ 3.06
THRA-201ENST00000264637 KIF21BO75037 1637 aa34.12■■■■□ 3.05
THRA-201ENST00000264637 RANGAP1P46060 587 aaPredicted RBP34.06■■■■□ 3.04
THRA-201ENST00000264637 RAPGEF2Q9Y4G8 1499 aa34.02■■■■□ 3.04
THRA-201ENST00000264637 VPS8Q8N3P4 1428 aa34.02■■■■□ 3.04
THRA-201ENST00000264637 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.03
THRA-201ENST00000264637 YTHDC1Q96MU7 727 aaKnown RBP34■■■■□ 3.03
THRA-201ENST00000264637 MYT1Q01538 1121 aa33.94■■■■□ 3.02
THRA-201ENST00000264637 BAZ1BQ9UIG0 1483 aaKnown RBP33.94■■■■□ 3.02
THRA-201ENST00000264637 MIER1Q8N108 512 aa33.92■■■■□ 3.02
THRA-201ENST00000264637 APLP2Q06481 763 aa33.92■■■■□ 3.02
THRA-201ENST00000264637 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
THRA-201ENST00000264637 KANK4Q5T7N3 995 aaPredicted RBP33.56■■■□□ 2.96
THRA-201ENST00000264637 ARAP1Q96P48 1450 aa33.55■■■□□ 2.96
THRA-201ENST00000264637 BIVM-ERCC5R4GMW8 1640 aa33.55■■■□□ 2.96
THRA-201ENST00000264637 PRXQ9BXM0 1461 aa33.54■■■□□ 2.96
THRA-201ENST00000264637 DHX57Q6P158 1386 aaKnown RBP33.51■■■□□ 2.96
THRA-201ENST00000264637 ERICH3Q5RHP9 1530 aa33.49■■■□□ 2.95
THRA-201ENST00000264637 CLSPNQ9HAW4 1339 aa33.39■■■□□ 2.94
THRA-201ENST00000264637 CUX1P39880 1505 aa33.37■■■□□ 2.93
THRA-201ENST00000264637 KIF27Q86VH2 1401 aa33.28■■■□□ 2.92
THRA-201ENST00000264637 RRBP1Q9P2E9 1410 aaKnown RBP33.27■■■□□ 2.92
THRA-201ENST00000264637 ITGAEP38570 1179 aa33.21■■■□□ 2.91
THRA-201ENST00000264637 NCAPD3P42695 1498 aa33.2■■■□□ 2.91
THRA-201ENST00000264637 ARHGAP35Q9NRY4 1499 aa33.19■■■□□ 2.9
THRA-201ENST00000264637 HMGXB3Q12766 1538 aa33.17■■■□□ 2.9
THRA-201ENST00000264637 CCNB3Q8WWL7 1395 aa33.16■■■□□ 2.9
THRA-201ENST00000264637 CUX2O14529 1486 aa33.09■■■□□ 2.89
THRA-201ENST00000264637 CFTRP13569 1480 aa33.09■■■□□ 2.89
THRA-201ENST00000264637 RAB3GAP2Q9H2M9 1393 aa32.96■■■□□ 2.87
THRA-201ENST00000264637 IGF1RP08069 1367 aa32.95■■■□□ 2.87
THRA-201ENST00000264637 SUPT16HQ9Y5B9 1047 aaKnown RBP32.94■■■□□ 2.86
THRA-201ENST00000264637 MAPKBP1O60336 1514 aa32.88■■■□□ 2.85
THRA-201ENST00000264637 TIAM1Q13009 1591 aa32.85■■■□□ 2.85
THRA-201ENST00000264637 KCNH8Q96L42 1107 aa32.85■■■□□ 2.85
THRA-201ENST00000264637 CARMIL1Q5VZK9 1371 aa32.8■■■□□ 2.84
THRA-201ENST00000264637 PHLDB1Q86UU1 1377 aa32.78■■■□□ 2.84
THRA-201ENST00000264637 LRRC9Q6ZRR7 1453 aa32.76■■■□□ 2.83
THRA-201ENST00000264637 SETD5Q9C0A6 1442 aa32.76■■■□□ 2.83
THRA-201ENST00000264637 FAM50AQ14320 339 aaKnown RBP32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms