RNA–Protein interactions for RNA: ENST00000307877.6

SRP68-201, Transcript of signal recognition particle 68, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP68, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-201ENST00000307877 NISCHQ9Y2I1 1504 aa38.67■■■■□ 3.78
SRP68-201ENST00000307877 HRCP23327 699 aa36.27■■■■□ 3.4
SRP68-201ENST00000307877 PELP1Q8IZL8 1130 aaKnown RBP35.66■■■■□ 3.3
SRP68-201ENST00000307877 PPARGC1BQ86YN6 1023 aaKnown RBP35.58■■■■□ 3.29
SRP68-201ENST00000307877 PCGF6Q9BYE7 350 aa35.33■■■■□ 3.25
SRP68-201ENST00000307877 SUPT5HO00267 1087 aaKnown RBP34.9■■■■□ 3.18
SRP68-201ENST00000307877 MYO15BQ96JP2 1530 aa34.88■■■■□ 3.17
SRP68-201ENST00000307877 SHROOM4Q9ULL8 1493 aa34.83■■■■□ 3.17
SRP68-201ENST00000307877 SCAF1Q9H7N4 1312 aaKnown RBP34.64■■■■□ 3.14
SRP68-201ENST00000307877 CHIC1Q5VXU3 224 aa34.5■■■■□ 3.11
SRP68-201ENST00000307877 MYT1Q01538 1121 aa34.38■■■■□ 3.09
SRP68-201ENST00000307877 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
SRP68-201ENST00000307877 TRIM26Q12899 539 aaPredicted RBP34■■■■□ 3.03
SRP68-201ENST00000307877 CCDC180Q9P1Z9 1646 aa33.85■■■■□ 3.01
SRP68-201ENST00000307877 ZEB1P37275 1124 aaPredicted RBP33.84■■■■□ 3.01
SRP68-201ENST00000307877 LOC105371045A0A1W2PR82 267 aa33.81■■■■□ 3
SRP68-201ENST00000307877 ACIN1Q9UKV3 1341 aaKnown RBP33.6■■■□□ 2.97
SRP68-201ENST00000307877 NEUROD1Q13562 356 aa33.51■■■□□ 2.96
SRP68-201ENST00000307877 GTF3C3Q9Y5Q9 886 aa33.38■■■□□ 2.93
SRP68-201ENST00000307877 CENPBP07199 599 aaPredicted RBP33.06■■■□□ 2.88
SRP68-201ENST00000307877 ZCCHC6Q5VYS8 1495 aaKnown RBP32.98■■■□□ 2.87
SRP68-201ENST00000307877 DIEXFQ68CQ4 756 aaKnown RBP32.76■■■□□ 2.84
SRP68-201ENST00000307877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.57■■■□□ 2.8
SRP68-201ENST00000307877 CCER1Q8TC90 406 aaPredicted RBP32.49■■■□□ 2.79
SRP68-201ENST00000307877 TTBK1Q5TCY1 1321 aaPredicted RBP32.35■■■□□ 2.77
SRP68-201ENST00000307877 YTHDC1Q96MU7 727 aaKnown RBP32.34■■■□□ 2.77
SRP68-201ENST00000307877 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
SRP68-201ENST00000307877 FAM9AQ8IZU1 332 aaPredicted RBP32.3■■■□□ 2.76
SRP68-201ENST00000307877 EHMT2Q96KQ7 1210 aa32.24■■■□□ 2.75
SRP68-201ENST00000307877 BCL11AQ9H165 835 aa32.24■■■□□ 2.75
SRP68-201ENST00000307877 TRIM41Q8WV44 630 aa32.21■■■□□ 2.75
SRP68-201ENST00000307877 ZNF316A6NFI3 1004 aaPredicted RBP31.99■■■□□ 2.71
SRP68-201ENST00000307877 ANP32EQ9BTT0 268 aa31.94■■■□□ 2.7
SRP68-201ENST00000307877 MIER1Q8N108 512 aa31.9■■■□□ 2.7
SRP68-201ENST00000307877 CSRNP3Q8WYN3 585 aa31.65■■■□□ 2.66
SRP68-201ENST00000307877 TSHZ2Q9NRE2 1034 aa31.65■■■□□ 2.66
SRP68-201ENST00000307877 SUPT16HQ9Y5B9 1047 aaKnown RBP31.63■■■□□ 2.65
SRP68-201ENST00000307877 ABCC9O60706 1549 aa31.44■■■□□ 2.62
SRP68-201ENST00000307877 CLSPNQ9HAW4 1339 aa31.43■■■□□ 2.62
SRP68-201ENST00000307877 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
SRP68-201ENST00000307877 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
SRP68-201ENST00000307877 PRKCSHP14314 528 aaPredicted RBP31.25■■■□□ 2.59
SRP68-201ENST00000307877 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
SRP68-201ENST00000307877 BCANQ96GW7 911 aa30.94■■■□□ 2.54
SRP68-201ENST00000307877 HNRNPUL2Q1KMD3 747 aaKnown RBP30.92■■■□□ 2.54
SRP68-201ENST00000307877 CEP162Q5TB80 1403 aa30.89■■■□□ 2.54
SRP68-201ENST00000307877 RBM19Q9Y4C8 960 aaKnown RBP30.84■■■□□ 2.53
SRP68-201ENST00000307877 FKBP8Q14318 412 aa30.71■■■□□ 2.51
SRP68-201ENST00000307877 MSH5O43196 834 aa30.65■■■□□ 2.5
SRP68-201ENST00000307877 TNIKQ9UKE5 1360 aa30.61■■■□□ 2.49
SRP68-201ENST00000307877 SCRIBQ14160 1630 aa30.6■■■□□ 2.49
SRP68-201ENST00000307877 KCNH8Q96L42 1107 aa30.6■■■□□ 2.49
SRP68-201ENST00000307877 UBTFP17480 764 aaKnown RBP30.48■■■□□ 2.47
SRP68-201ENST00000307877 ERICH6Q7L0X2 663 aa30.48■■■□□ 2.47
SRP68-201ENST00000307877 ITGAEP38570 1179 aa30.47■■■□□ 2.47
SRP68-201ENST00000307877 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
SRP68-201ENST00000307877 ABCC8Q09428 1581 aa30.39■■■□□ 2.46
SRP68-201ENST00000307877 NEFLP07196 543 aa30.37■■■□□ 2.45
SRP68-201ENST00000307877 SOGA1O94964 1423 aa30.36■■■□□ 2.45
SRP68-201ENST00000307877 EIF4G1Q04637 1599 aaKnown RBP30.35■■■□□ 2.45
SRP68-201ENST00000307877 CECR2Q9BXF3 1484 aa30.33■■■□□ 2.45
SRP68-201ENST00000307877 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.44
SRP68-201ENST00000307877 DHX57Q6P158 1386 aaKnown RBP30.28■■■□□ 2.44
SRP68-201ENST00000307877 WIZO95785 1651 aa30.27■■■□□ 2.44
SRP68-201ENST00000307877 FANCIQ9NVI1 1328 aa30.26■■■□□ 2.43
SRP68-201ENST00000307877 ANO8Q9HCE9 1232 aaPredicted RBP30.24■■■□□ 2.43
SRP68-201ENST00000307877 DEKP35659 375 aaKnown RBP30.23■■■□□ 2.43
SRP68-201ENST00000307877 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
SRP68-201ENST00000307877 MYT1LQ9UL68 1186 aa30.13■■■□□ 2.41
SRP68-201ENST00000307877 GOLGA3Q08378 1498 aa30.13■■■□□ 2.41
SRP68-201ENST00000307877 APLP2Q06481 763 aa30.08■■■□□ 2.41
SRP68-201ENST00000307877 EEA1Q15075 1411 aa30.06■■■□□ 2.4
SRP68-201ENST00000307877 TRIM52Q96A61 297 aa30.06■■■□□ 2.4
SRP68-201ENST00000307877 CDK11AQ9UQ88 783 aaPredicted RBP30■■■□□ 2.39
SRP68-201ENST00000307877 CLIP1P30622 1438 aa29.99■■■□□ 2.39
SRP68-201ENST00000307877 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
SRP68-201ENST00000307877 DDX10Q13206 875 aaKnown RBP29.98■■■□□ 2.39
SRP68-201ENST00000307877 VPS8Q8N3P4 1428 aa29.96■■■□□ 2.39
SRP68-201ENST00000307877 SALL2Q9Y467 1007 aaPredicted RBP29.92■■■□□ 2.38
SRP68-201ENST00000307877 IRX6P78412 446 aaPredicted RBP29.83■■■□□ 2.37
SRP68-201ENST00000307877 NBR1Q14596 966 aa29.79■■■□□ 2.36
SRP68-201ENST00000307877 NACADO15069 1562 aa29.78■■■□□ 2.36
SRP68-201ENST00000307877 RANGAP1P46060 587 aaPredicted RBP29.77■■■□□ 2.36
SRP68-201ENST00000307877 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
SRP68-201ENST00000307877 CCDC136Q96JN2 1154 aa29.75■■■□□ 2.35
SRP68-201ENST00000307877 CCER2I3L3R5 266 aa29.73■■■□□ 2.35
SRP68-201ENST00000307877 ERICH6BQ5W0A0 696 aa29.73■■■□□ 2.35
SRP68-201ENST00000307877 PPP1R15AO75807 674 aaPredicted RBP29.73■■■□□ 2.35
SRP68-201ENST00000307877 ANP32CO43423 234 aa29.66■■■□□ 2.34
SRP68-201ENST00000307877 NOP58Q9Y2X3 529 aaKnown RBP29.65■■■□□ 2.34
SRP68-201ENST00000307877 KIF21BO75037 1637 aa29.63■■■□□ 2.33
SRP68-201ENST00000307877 PAK3O75914 559 aaPredicted RBP29.61■■■□□ 2.33
SRP68-201ENST00000307877 HIRIP3Q9BW71 556 aaPredicted RBP29.59■■■□□ 2.33
SRP68-201ENST00000307877 IL27Q8NEV9 243 aa29.57■■■□□ 2.32
SRP68-201ENST00000307877 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
SRP68-201ENST00000307877 KANK4Q5T7N3 995 aaPredicted RBP29.56■■■□□ 2.32
SRP68-201ENST00000307877 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
SRP68-201ENST00000307877 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
SRP68-201ENST00000307877 RTN4Q9NQC3 1192 aaKnown RBP29.53■■■□□ 2.32
SRP68-201ENST00000307877 CUX2O14529 1486 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms