Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRAV8-6A0A0B4J262 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
TRAV8-6A0A0B4J262 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
TRAV8-6A0A0B4J262 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRAV8-6A0A0B4J262 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV8-6A0A0B4J262 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TRAV8-6A0A0B4J262 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.34■■□□□ 1.33
TRAV8-6A0A0B4J262 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.2■■□□□ 1.3
TRAV8-6A0A0B4J262 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV8-6A0A0B4J262 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV8-6A0A0B4J262 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRAV8-6A0A0B4J262 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TRAV8-6A0A0B4J262 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRAV8-6A0A0B4J262 AL356512.1-201ENST00000607453 1739 ntBASIC22.79■■□□□ 1.24
TRAV8-6A0A0B4J262 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAV8-6A0A0B4J262 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TRAV8-6A0A0B4J262 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRAV8-6A0A0B4J262 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRAV8-6A0A0B4J262 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV8-6A0A0B4J262 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV8-6A0A0B4J262 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.54■■□□□ 1.2
TRAV8-6A0A0B4J262 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.43■■□□□ 1.18
TRAV8-6A0A0B4J262 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.38■■□□□ 1.17
TRAV8-6A0A0B4J262 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRAV8-6A0A0B4J262 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TRAV8-6A0A0B4J262 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.26■■□□□ 1.15
TRAV8-6A0A0B4J262 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRAV8-6A0A0B4J262 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.15■■□□□ 1.14
TRAV8-6A0A0B4J262 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV8-6A0A0B4J262 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
TRAV8-6A0A0B4J262 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAV8-6A0A0B4J262 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TRAV8-6A0A0B4J262 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TRAV8-6A0A0B4J262 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
TRAV8-6A0A0B4J262 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRAV8-6A0A0B4J262 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV8-6A0A0B4J262 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV8-6A0A0B4J262 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV8-6A0A0B4J262 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV8-6A0A0B4J262 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRAV8-6A0A0B4J262 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV8-6A0A0B4J262 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV8-6A0A0B4J262 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV8-6A0A0B4J262 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV8-6A0A0B4J262 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV8-6A0A0B4J262 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV8-6A0A0B4J262 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.63■■□□□ 1.05
TRAV8-6A0A0B4J262 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRAV8-6A0A0B4J262 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV8-6A0A0B4J262 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TRAV8-6A0A0B4J262 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.59■■□□□ 1.05
TRAV8-6A0A0B4J262 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRAV8-6A0A0B4J262 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV8-6A0A0B4J262 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV8-6A0A0B4J262 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV8-6A0A0B4J262 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV8-6A0A0B4J262 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV8-6A0A0B4J262 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAV8-6A0A0B4J262 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.47■■□□□ 1.03
TRAV8-6A0A0B4J262 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV8-6A0A0B4J262 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
TRAV8-6A0A0B4J262 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV8-6A0A0B4J262 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAV8-6A0A0B4J262 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAV8-6A0A0B4J262 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV8-6A0A0B4J262 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV8-6A0A0B4J262 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.42■■□□□ 1.02
TRAV8-6A0A0B4J262 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAV8-6A0A0B4J262 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV8-6A0A0B4J262 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRAV8-6A0A0B4J262 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRAV8-6A0A0B4J262 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-6A0A0B4J262 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV8-6A0A0B4J262 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-6A0A0B4J262 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV8-6A0A0B4J262 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV8-6A0A0B4J262 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV8-6A0A0B4J262 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.22■□□□□ 0.99
TRAV8-6A0A0B4J262 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV8-6A0A0B4J262 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV8-6A0A0B4J262 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV8-6A0A0B4J262 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV8-6A0A0B4J262 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV8-6A0A0B4J262 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV8-6A0A0B4J262 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TRAV8-6A0A0B4J262 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRAV8-6A0A0B4J262 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV8-6A0A0B4J262 AL161658.1-201ENST00000623641 1967 ntBASIC21.06■□□□□ 0.96
TRAV8-6A0A0B4J262 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV8-6A0A0B4J262 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV8-6A0A0B4J262 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV8-6A0A0B4J262 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV8-6A0A0B4J262 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRAV8-6A0A0B4J262 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV8-6A0A0B4J262 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV8-6A0A0B4J262 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV8-6A0A0B4J262 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
TRAV8-6A0A0B4J262 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV8-6A0A0B4J262 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV8-6A0A0B4J262 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms