RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 NISCHQ9Y2I1 1504 aa43.82■■■■■ 4.61
GRAMD1A-201ENST00000317991 SHROOM4Q9ULL8 1493 aa38.46■■■■□ 3.75
GRAMD1A-201ENST00000317991 SUPT5HO00267 1087 aaKnown RBP38.08■■■■□ 3.69
GRAMD1A-201ENST00000317991 HRCP23327 699 aa37.44■■■■□ 3.58
GRAMD1A-201ENST00000317991 MYO15BQ96JP2 1530 aa37.35■■■■□ 3.57
GRAMD1A-201ENST00000317991 CHIC1Q5VXU3 224 aa37.23■■■■□ 3.55
GRAMD1A-201ENST00000317991 CCDC180Q9P1Z9 1646 aa37.23■■■■□ 3.55
GRAMD1A-201ENST00000317991 ZCCHC6Q5VYS8 1495 aaKnown RBP37.18■■■■□ 3.54
GRAMD1A-201ENST00000317991 PCGF6Q9BYE7 350 aa37.06■■■■□ 3.52
GRAMD1A-201ENST00000317991 PPARGC1BQ86YN6 1023 aaKnown RBP36.83■■■■□ 3.49
GRAMD1A-201ENST00000317991 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
GRAMD1A-201ENST00000317991 LOC105371045A0A1W2PR82 267 aa36.39■■■■□ 3.42
GRAMD1A-201ENST00000317991 DCAF1Q9Y4B6 1507 aa36.26■■■■□ 3.4
GRAMD1A-201ENST00000317991 TRIM26Q12899 539 aaPredicted RBP35.93■■■■□ 3.34
GRAMD1A-201ENST00000317991 ABCC9O60706 1549 aa35.65■■■■□ 3.3
GRAMD1A-201ENST00000317991 ZEB1P37275 1124 aaPredicted RBP35.35■■■■□ 3.25
GRAMD1A-201ENST00000317991 FAM9AQ8IZU1 332 aaPredicted RBP35.24■■■■□ 3.23
GRAMD1A-201ENST00000317991 TRIM41Q8WV44 630 aa35.23■■■■□ 3.23
GRAMD1A-201ENST00000317991 SCAF1Q9H7N4 1312 aaKnown RBP35.13■■■■□ 3.21
GRAMD1A-201ENST00000317991 EHMT2Q96KQ7 1210 aa35.11■■■■□ 3.21
GRAMD1A-201ENST00000317991 RSF1Q96T23 1441 aaPredicted RBP35.11■■■■□ 3.21
GRAMD1A-201ENST00000317991 PELP1Q8IZL8 1130 aaKnown RBP35.01■■■■□ 3.19
GRAMD1A-201ENST00000317991 RB1CC1Q8TDY2 1594 aa34.89■■■■□ 3.18
GRAMD1A-201ENST00000317991 SCRIBQ14160 1630 aa34.86■■■■□ 3.17
GRAMD1A-201ENST00000317991 NACADO15069 1562 aa34.72■■■■□ 3.15
GRAMD1A-201ENST00000317991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.58■■■■□ 3.13
GRAMD1A-201ENST00000317991 CCER1Q8TC90 406 aaPredicted RBP34.42■■■■□ 3.1
GRAMD1A-201ENST00000317991 ACIN1Q9UKV3 1341 aaKnown RBP34.41■■■■□ 3.1
GRAMD1A-201ENST00000317991 NEUROD1Q13562 356 aa34.41■■■■□ 3.1
GRAMD1A-201ENST00000317991 CECR2Q9BXF3 1484 aa34.36■■■■□ 3.09
GRAMD1A-201ENST00000317991 MROH2BQ7Z745 1585 aa34.25■■■■□ 3.07
GRAMD1A-201ENST00000317991 DIEXFQ68CQ4 756 aaKnown RBP34.17■■■■□ 3.06
GRAMD1A-201ENST00000317991 TTBK1Q5TCY1 1321 aaPredicted RBP34.15■■■■□ 3.06
GRAMD1A-201ENST00000317991 GTF3C3Q9Y5Q9 886 aa34.14■■■■□ 3.06
GRAMD1A-201ENST00000317991 WIZO95785 1651 aa34.12■■■■□ 3.05
GRAMD1A-201ENST00000317991 CENPBP07199 599 aaPredicted RBP33.98■■■■□ 3.03
GRAMD1A-201ENST00000317991 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
GRAMD1A-201ENST00000317991 EIF4G1Q04637 1599 aaKnown RBP33.82■■■■□ 3
GRAMD1A-201ENST00000317991 BAZ1AQ9NRL2 1556 aaPredicted RBP33.77■■■■□ 3
GRAMD1A-201ENST00000317991 PABPN1Q86U42 306 aaKnown RBP eCLIP33.76■■■■□ 31e-6■■□□□ 12.1
GRAMD1A-201ENST00000317991 WRNQ14191 1432 aaPredicted RBP eCLIP33.75■■■□□ 2.999e-6■■■■■ 50.1
GRAMD1A-201ENST00000317991 CCDC88BA6NC98 1476 aa33.74■■■□□ 2.99
GRAMD1A-201ENST00000317991 ABCC8Q09428 1581 aa33.73■■■□□ 2.99
GRAMD1A-201ENST00000317991 CEP162Q5TB80 1403 aa33.72■■■□□ 2.99
GRAMD1A-201ENST00000317991 ZNF316A6NFI3 1004 aaPredicted RBP33.64■■■□□ 2.98
GRAMD1A-201ENST00000317991 YTHDC1Q96MU7 727 aaKnown RBP33.62■■■□□ 2.97
GRAMD1A-201ENST00000317991 SOGA1O94964 1423 aa33.61■■■□□ 2.97
GRAMD1A-201ENST00000317991 BICRAQ9NZM4 1560 aa33.57■■■□□ 2.96
GRAMD1A-201ENST00000317991 TNIKQ9UKE5 1360 aa33.52■■■□□ 2.96
GRAMD1A-201ENST00000317991 UBTFP17480 764 aaKnown RBP33.5■■■□□ 2.95
GRAMD1A-201ENST00000317991 RUSC2Q8N2Y8 1516 aa33.44■■■□□ 2.94
GRAMD1A-201ENST00000317991 CSRNP3Q8WYN3 585 aa33.43■■■□□ 2.94
GRAMD1A-201ENST00000317991 MIER1Q8N108 512 aa33.41■■■□□ 2.94
GRAMD1A-201ENST00000317991 TOP2AP11388 1531 aaKnown RBP33.39■■■□□ 2.94
GRAMD1A-201ENST00000317991 MYT1Q01538 1121 aa33.37■■■□□ 2.93
GRAMD1A-201ENST00000317991 HNRNPUL2Q1KMD3 747 aaKnown RBP33.34■■■□□ 2.93
GRAMD1A-201ENST00000317991 SMARCA2P51531 1590 aa33.32■■■□□ 2.92
GRAMD1A-201ENST00000317991 EEA1Q15075 1411 aa33.19■■■□□ 2.9
GRAMD1A-201ENST00000317991 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
GRAMD1A-201ENST00000317991 GOLGA3Q08378 1498 aa33.16■■■□□ 2.9
GRAMD1A-201ENST00000317991 CLIP1P30622 1438 aa32.92■■■□□ 2.86
GRAMD1A-201ENST00000317991 RANGAP1P46060 587 aaPredicted RBP32.9■■■□□ 2.86
GRAMD1A-201ENST00000317991 CEP164Q9UPV0 1460 aa32.87■■■□□ 2.85
GRAMD1A-201ENST00000317991 APLP2Q06481 763 aa32.82■■■□□ 2.84
GRAMD1A-201ENST00000317991 VPS8Q8N3P4 1428 aa32.81■■■□□ 2.84
GRAMD1A-201ENST00000317991 SYNJ1O43426 1573 aa32.76■■■□□ 2.83
GRAMD1A-201ENST00000317991 KIF21BO75037 1637 aa32.75■■■□□ 2.83
GRAMD1A-201ENST00000317991 RAPGEF2Q9Y4G8 1499 aa32.68■■■□□ 2.82
GRAMD1A-201ENST00000317991 SUPT16HQ9Y5B9 1047 aaKnown RBP32.63■■■□□ 2.81
GRAMD1A-201ENST00000317991 DHX57Q6P158 1386 aaKnown RBP32.58■■■□□ 2.81
GRAMD1A-201ENST00000317991 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
GRAMD1A-201ENST00000317991 ATAD2BQ9ULI0 1458 aa32.5■■■□□ 2.79
GRAMD1A-201ENST00000317991 CLSPNQ9HAW4 1339 aa32.47■■■□□ 2.79
GRAMD1A-201ENST00000317991 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.79
GRAMD1A-201ENST00000317991 KANK4Q5T7N3 995 aaPredicted RBP32.44■■■□□ 2.78
GRAMD1A-201ENST00000317991 TSHZ2Q9NRE2 1034 aa32.33■■■□□ 2.77
GRAMD1A-201ENST00000317991 KCNH8Q96L42 1107 aa32.29■■■□□ 2.76
GRAMD1A-201ENST00000317991 ARAP1Q96P48 1450 aa32.27■■■□□ 2.76
GRAMD1A-201ENST00000317991 ITGAEP38570 1179 aa32.21■■■□□ 2.75
GRAMD1A-201ENST00000317991 TOP2BQ02880 1626 aa32.15■■■□□ 2.74
GRAMD1A-201ENST00000317991 RRBP1Q9P2E9 1410 aaKnown RBP32.14■■■□□ 2.74
GRAMD1A-201ENST00000317991 PRXQ9BXM0 1461 aa32.12■■■□□ 2.73
GRAMD1A-201ENST00000317991 CC2D2AQ9P2K1 1620 aa32.12■■■□□ 2.73
GRAMD1A-201ENST00000317991 NCAPD3P42695 1498 aa32.12■■■□□ 2.73
GRAMD1A-201ENST00000317991 BCANQ96GW7 911 aa32.09■■■□□ 2.73
GRAMD1A-201ENST00000317991 ERICH3Q5RHP9 1530 aa32.06■■■□□ 2.72
GRAMD1A-201ENST00000317991 CCNB3Q8WWL7 1395 aa32.05■■■□□ 2.72
GRAMD1A-201ENST00000317991 ANP32EQ9BTT0 268 aa32.04■■■□□ 2.72
GRAMD1A-201ENST00000317991 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
GRAMD1A-201ENST00000317991 CUX2O14529 1486 aa32.01■■■□□ 2.72
GRAMD1A-201ENST00000317991 BIVM-ERCC5R4GMW8 1640 aa31.95■■■□□ 2.71
GRAMD1A-201ENST00000317991 RAB3GAP2Q9H2M9 1393 aa31.94■■■□□ 2.7
GRAMD1A-201ENST00000317991 FKBP8Q14318 412 aa31.92■■■□□ 2.7
GRAMD1A-201ENST00000317991 DDX10Q13206 875 aaKnown RBP31.92■■■□□ 2.7
GRAMD1A-201ENST00000317991 MAPKBP1O60336 1514 aa31.89■■■□□ 2.7
GRAMD1A-201ENST00000317991 ARHGAP35Q9NRY4 1499 aa31.87■■■□□ 2.69
GRAMD1A-201ENST00000317991 SIN3AQ96ST3 1273 aa31.83■■■□□ 2.69
GRAMD1A-201ENST00000317991 KIF27Q86VH2 1401 aa31.79■■■□□ 2.68
GRAMD1A-201ENST00000317991 CUX1P39880 1505 aa31.78■■■□□ 2.68
GRAMD1A-201ENST00000317991 HIRIP3Q9BW71 556 aaPredicted RBP31.76■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms