RNA–Protein interactions for RNA: ENST00000315614.11

NEURL4-201, Transcript of neuralized E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEURL4, Length 5,182 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEURL4-201ENST00000315614 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
NEURL4-201ENST00000315614 DCAF8L2P0C7V8 631 aa37.47■■■■□ 3.59
NEURL4-201ENST00000315614 SUPT5HO00267 1087 aaKnown RBP36.28■■■■□ 3.4
NEURL4-201ENST00000315614 SHROOM4Q9ULL8 1493 aa35.83■■■■□ 3.33
NEURL4-201ENST00000315614 EHMT2Q96KQ7 1210 aa34.64■■■■□ 3.14
NEURL4-201ENST00000315614 PCGF6Q9BYE7 350 aa34.13■■■■□ 3.05
NEURL4-201ENST00000315614 FAM9AQ8IZU1 332 aaPredicted RBP34.07■■■■□ 3.04
NEURL4-201ENST00000315614 APLP2Q06481 763 aa33.79■■■■□ 3
NEURL4-201ENST00000315614 TRIM41Q8WV44 630 aa33.63■■■□□ 2.97
NEURL4-201ENST00000315614 TTBK1Q5TCY1 1321 aaPredicted RBP33.53■■■□□ 2.96
NEURL4-201ENST00000315614 PELP1Q8IZL8 1130 aaKnown RBP33.42■■■□□ 2.94
NEURL4-201ENST00000315614 ZEB1P37275 1124 aaPredicted RBP33.4■■■□□ 2.94
NEURL4-201ENST00000315614 CCER1Q8TC90 406 aaPredicted RBP33.16■■■□□ 2.9
NEURL4-201ENST00000315614 RANGAP1P46060 587 aaPredicted RBP33.03■■■□□ 2.88
NEURL4-201ENST00000315614 CENPBP07199 599 aaPredicted RBP32.97■■■□□ 2.87
NEURL4-201ENST00000315614 UBTFP17480 764 aaKnown RBP32.96■■■□□ 2.87
NEURL4-201ENST00000315614 CHIC1Q5VXU3 224 aa32.92■■■□□ 2.86
NEURL4-201ENST00000315614 TRIM26Q12899 539 aaPredicted RBP32.84■■■□□ 2.85
NEURL4-201ENST00000315614 HRCP23327 699 aa32.8■■■□□ 2.84
NEURL4-201ENST00000315614 PPARGC1BQ86YN6 1023 aaKnown RBP32.7■■■□□ 2.83
NEURL4-201ENST00000315614 LOC105371045A0A1W2PR82 267 aa32.69■■■□□ 2.82
NEURL4-201ENST00000315614 ATP1B4Q9UN42 357 aaPredicted RBP32.53■■■□□ 2.8
NEURL4-201ENST00000315614 YTHDC1Q96MU7 727 aaKnown RBP32.3■■■□□ 2.76
NEURL4-201ENST00000315614 ERICH6Q7L0X2 663 aa31.95■■■□□ 2.71
NEURL4-201ENST00000315614 NEFLP07196 543 aa31.94■■■□□ 2.7
NEURL4-201ENST00000315614 HNRNPUL2Q1KMD3 747 aaKnown RBP31.89■■■□□ 2.7
NEURL4-201ENST00000315614 ITGAEP38570 1179 aa31.82■■■□□ 2.68
NEURL4-201ENST00000315614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.79■■■□□ 2.68
NEURL4-201ENST00000315614 ABCC9O60706 1549 aa31.66■■■□□ 2.66
NEURL4-201ENST00000315614 MYT1Q01538 1121 aa31.57■■■□□ 2.64
NEURL4-201ENST00000315614 DIEXFQ68CQ4 756 aaKnown RBP31.54■■■□□ 2.64
NEURL4-201ENST00000315614 PABPN1Q86U42 306 aaKnown RBP eCLIP31.41■■■□□ 2.621e-6■■■■■ 27.1
NEURL4-201ENST00000315614 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
NEURL4-201ENST00000315614 POLR3GLQ9BT43 218 aa31.16■■■□□ 2.58
NEURL4-201ENST00000315614 FAM50AQ14320 339 aaKnown RBP31.09■■■□□ 2.57
NEURL4-201ENST00000315614 CSRNP3Q8WYN3 585 aa31.01■■■□□ 2.55
NEURL4-201ENST00000315614 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
NEURL4-201ENST00000315614 CNGB1Q14028 1251 aaPredicted RBP30.93■■■□□ 2.54
NEURL4-201ENST00000315614 GTF3C3Q9Y5Q9 886 aa30.93■■■□□ 2.54
NEURL4-201ENST00000315614 ZNF316A6NFI3 1004 aaPredicted RBP30.92■■■□□ 2.54
NEURL4-201ENST00000315614 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
NEURL4-201ENST00000315614 NEUROD1Q13562 356 aa30.87■■■□□ 2.53
NEURL4-201ENST00000315614 MYT1LQ9UL68 1186 aa30.83■■■□□ 2.53
NEURL4-201ENST00000315614 CCDC180Q9P1Z9 1646 aa30.83■■■□□ 2.53
NEURL4-201ENST00000315614 TRIM52Q96A61 297 aa30.75■■■□□ 2.51
NEURL4-201ENST00000315614 ACIN1Q9UKV3 1341 aaKnown RBP30.67■■■□□ 2.5
NEURL4-201ENST00000315614 DAXXQ9UER7 740 aaPredicted RBP30.64■■■□□ 2.5
NEURL4-201ENST00000315614 ANP32CO43423 234 aa30.58■■■□□ 2.49
NEURL4-201ENST00000315614 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
NEURL4-201ENST00000315614 BCANQ96GW7 911 aa30.52■■■□□ 2.48
NEURL4-201ENST00000315614 P3H3Q8IVL6 736 aa30.49■■■□□ 2.47
NEURL4-201ENST00000315614 ZNF326Q5BKZ1 582 aaKnown RBP30.33■■■□□ 2.45
NEURL4-201ENST00000315614 RSF1Q96T23 1441 aaPredicted RBP30.31■■■□□ 2.44
NEURL4-201ENST00000315614 SLC4A1APQ9BWU0 796 aaKnown RBP30.27■■■□□ 2.44
NEURL4-201ENST00000315614 RTL5Q5HYW3 569 aaPredicted RBP30.2■■■□□ 2.43
NEURL4-201ENST00000315614 FBLN2P98095 1184 aa30.17■■■□□ 2.42
NEURL4-201ENST00000315614 CDK11AQ9UQ88 783 aaPredicted RBP30.17■■■□□ 2.42
NEURL4-201ENST00000315614 ARID3CA6NKF2 412 aa30.16■■■□□ 2.42
NEURL4-201ENST00000315614 CLSPNQ9HAW4 1339 aa30.13■■■□□ 2.41
NEURL4-201ENST00000315614 CLIP1P30622 1438 aa30.02■■■□□ 2.4
NEURL4-201ENST00000315614 TONSLQ96HA7 1378 aa30.01■■■□□ 2.39
NEURL4-201ENST00000315614 EEA1Q15075 1411 aa29.94■■■□□ 2.38
NEURL4-201ENST00000315614 CEP162Q5TB80 1403 aa29.94■■■□□ 2.38
NEURL4-201ENST00000315614 DDX10Q13206 875 aaKnown RBP29.94■■■□□ 2.38
NEURL4-201ENST00000315614 ZNF777Q9ULD5 760 aaPredicted RBP29.93■■■□□ 2.38
NEURL4-201ENST00000315614 SCAF1Q9H7N4 1312 aaKnown RBP29.9■■■□□ 2.38
NEURL4-201ENST00000315614 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
NEURL4-201ENST00000315614 FKBP8Q14318 412 aa29.87■■■□□ 2.37
NEURL4-201ENST00000315614 GOLGA3Q08378 1498 aa29.86■■■□□ 2.37
NEURL4-201ENST00000315614 MIER1Q8N108 512 aa29.85■■■□□ 2.37
NEURL4-201ENST00000315614 NACADO15069 1562 aa29.81■■■□□ 2.36
NEURL4-201ENST00000315614 HNRNPUQ00839 825 aaKnown RBP eCLIP29.76■■■□□ 2.35
NEURL4-201ENST00000315614 WRNQ14191 1432 aaPredicted RBP eCLIP29.75■■■□□ 2.35
NEURL4-201ENST00000315614 TNIKQ9UKE5 1360 aa29.75■■■□□ 2.35
NEURL4-201ENST00000315614 CHIC2Q9UKJ5 165 aa29.7■■■□□ 2.35
NEURL4-201ENST00000315614 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.34
NEURL4-201ENST00000315614 FAM9BQ8IZU0 186 aa29.62■■■□□ 2.33
NEURL4-201ENST00000315614 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
NEURL4-201ENST00000315614 ANP32AP39687 249 aaKnown RBP29.58■■■□□ 2.33
NEURL4-201ENST00000315614 CANXP27824 592 aaKnown RBP29.58■■■□□ 2.33
NEURL4-201ENST00000315614 CEP164Q9UPV0 1460 aa29.58■■■□□ 2.33
NEURL4-201ENST00000315614 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
NEURL4-201ENST00000315614 HIRIP3Q9BW71 556 aaPredicted RBP29.52■■■□□ 2.32
NEURL4-201ENST00000315614 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
NEURL4-201ENST00000315614 KIF27Q86VH2 1401 aa29.42■■■□□ 2.3
NEURL4-201ENST00000315614 NPM2Q86SE8 214 aaKnown RBP29.41■■■□□ 2.3
NEURL4-201ENST00000315614 MRS2Q9HD23 443 aa29.41■■■□□ 2.3
NEURL4-201ENST00000315614 ZBTB47Q9UFB7 747 aaPredicted RBP29.4■■■□□ 2.3
NEURL4-201ENST00000315614 TMC1Q8TDI8 760 aa29.38■■■□□ 2.29
NEURL4-201ENST00000315614 RRP7BPQ9NSQ0 103 aa29.37■■■□□ 2.29
NEURL4-201ENST00000315614 SOGA1O94964 1423 aa29.35■■■□□ 2.29
NEURL4-201ENST00000315614 EIF4G2P78344 907 aaKnown RBP eCLIP29.34■■■□□ 2.29
NEURL4-201ENST00000315614 NEFMP07197 916 aa29.34■■■□□ 2.29
NEURL4-201ENST00000315614 TSPY4P0CV99 314 aa29.32■■■□□ 2.28
NEURL4-201ENST00000315614 TSPY10P0CW01 314 aa29.32■■■□□ 2.28
NEURL4-201ENST00000315614 SALL2Q9Y467 1007 aaPredicted RBP29.31■■■□□ 2.28
NEURL4-201ENST00000315614 CCDC136Q96JN2 1154 aa29.27■■■□□ 2.28
NEURL4-201ENST00000315614 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.28
NEURL4-201ENST00000315614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.26■■■□□ 2.27
NEURL4-201ENST00000315614 KDM2AQ9Y2K7 1162 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms