Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC11.19□□□□□ -0.625e-8■■□□□ 11.5
NCBP2P52298 PTPN12-216ENST00000523952 500 ntTSL 48.21□□□□□ -1.15e-8■■□□□ 11.5
NCBP2P52298 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.295e-8■■□□□ 11.5
NCBP2P52298 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.95■□□□□ 0.783e-9■■□□□ 11.5
NCBP2P52298 GABRE-202ENST00000417300 619 ntTSL 211.15□□□□□ -0.621e-7■■□□□ 11.5
NCBP2P52298 GABRE-203ENST00000441219 1324 ntTSL 27.61□□□□□ -1.191e-7■■□□□ 11.5
NCBP2P52298 MBNL3-208ENST00000436215 891 ntTSL 34.84□□□□□ -1.633e-9■■□□□ 11.5
NCBP2P52298 PRKRIP1-207ENST00000482549 1625 ntTSL 1 (best)23.93■■□□□ 1.423e-11■■□□□ 11.5
NCBP2P52298 PRKRIP1-204ENST00000469763 1642 ntTSL 522.39■■□□□ 1.183e-11■■□□□ 11.5
NCBP2P52298 PRKRIP1-205ENST00000477886 986 ntTSL 1 (best)21.55■■□□□ 1.043e-11■■□□□ 11.5
NCBP2P52298 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.233e-11■■□□□ 11.5
NCBP2P52298 C1GALT1-203ENST00000419721 591 ntTSL 319.29■□□□□ 0.682e-7■■□□□ 11.5
NCBP2P52298 C1GALT1-206ENST00000467716 458 ntTSL 516.21■□□□□ 0.192e-7■■□□□ 11.5
NCBP2P52298 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.432e-7■■□□□ 11.5
NCBP2P52298 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)11.11□□□□□ -0.632e-7■■□□□ 11.5
NCBP2P52298 C1GALT1-204ENST00000429911 802 ntTSL 510.73□□□□□ -0.692e-7■■□□□ 11.5
NCBP2P52298 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC12.18□□□□□ -0.461e-8■■□□□ 11.5
NCBP2P52298 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.079e-11■■□□□ 11.5
NCBP2P52298 CDC14B-209ENST00000474602 4960 ntTSL 1 (best)21.35■■□□□ 1.019e-11■■□□□ 11.5
NCBP2P52298 MAP2K1-202ENST00000425818 1338 ntTSL 520.39■□□□□ 0.859e-11■■□□□ 11.5
NCBP2P52298 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.29e-11■■□□□ 11.5
NCBP2P52298 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.589e-11■■□□□ 11.5
NCBP2P52298 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC10.79□□□□□ -0.689e-11■■□□□ 11.5
NCBP2P52298 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.782e-6■■□□□ 11.5
NCBP2P52298 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.13■□□□□ 0.332e-6■■□□□ 11.5
NCBP2P52298 MRPL46-205ENST00000560703 670 ntTSL 316.78■□□□□ 0.282e-6■■□□□ 11.5
NCBP2P52298 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.82□□□□□ -1.322e-6■■□□□ 11.5
NCBP2P52298 SAP30BP-212ENST00000580322 1558 ntTSL 521.48■■□□□ 1.034e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-213ENST00000580484 686 ntTSL 317.82■□□□□ 0.444e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-226ENST00000584861 579 ntTSL 215.95■□□□□ 0.144e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-201ENST00000293208 1272 ntTSL 515.57■□□□□ 0.084e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-219ENST00000583170 553 ntTSL 415.09■□□□□ 0.014e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-204ENST00000577292 1097 ntTSL 215.09■□□□□ 0.014e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-221ENST00000583536 1000 ntTSL 315.09■□□□□ 0.014e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-217ENST00000582022 2409 ntTSL 1 (best)14.09□□□□□ -0.154e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-205ENST00000578288 870 ntTSL 1 (best)13.62□□□□□ -0.234e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-222ENST00000583737 525 ntTSL 413.53□□□□□ -0.244e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-211ENST00000579877 561 ntTSL 213.35□□□□□ -0.274e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.92□□□□□ -0.344e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.384e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-203ENST00000542343 1011 ntTSL 29.71□□□□□ -0.864e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-206ENST00000578354 574 ntTSL 47.3□□□□□ -1.244e-10■■□□□ 11.5
NCBP2P52298 SAP30BP-210ENST00000579864 868 ntTSL 36.52□□□□□ -1.374e-10■■□□□ 11.5
NCBP2P52298 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.31□□□□□ -0.281e-9■■□□□ 11.5
NCBP2P52298 NME3-203ENST00000563367 891 ntTSL 326.01■■□□□ 1.755e-6■■□□□ 11.5
NCBP2P52298 NME3-209ENST00000566600 913 ntTSL 224.25■■□□□ 1.475e-6■■□□□ 11.5
NCBP2P52298 NME3-208ENST00000565379 911 ntTSL 224.15■■□□□ 1.465e-6■■□□□ 11.5
NCBP2P52298 NME3-202ENST00000561637 1014 ntTSL 223.03■■□□□ 1.285e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-205ENST00000586592 2214 ntTSL 222.15■■□□□ 1.145e-6■■□□□ 11.5
NCBP2P52298 GABBR1-207ENST00000467259 1252 ntTSL 221.88■■□□□ 1.095e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.65■■□□□ 1.065e-6■■□□□ 11.5
NCBP2P52298 NME3-206ENST00000564252 599 ntTSL 221.6■■□□□ 1.055e-6■■□□□ 11.5
NCBP2P52298 DHCR7-209ENST00000531364 507 ntTSL 420.21■□□□□ 0.831e-10■■□□□ 11.5
NCBP2P52298 VPS28-205ENST00000526204 2120 ntTSL 520.07■□□□□ 0.85e-6■■□□□ 11.5
NCBP2P52298 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.01■□□□□ 0.792e-9■■□□□ 11.5
NCBP2P52298 NME3-210ENST00000567271 752 ntTSL 219.98■□□□□ 0.795e-6■■□□□ 11.5
NCBP2P52298 VPS28-212ENST00000530836 1613 ntTSL 519.97■□□□□ 0.795e-6■■□□□ 11.5
NCBP2P52298 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.96■□□□□ 0.795e-6■■□□□ 11.5
NCBP2P52298 VPS28-208ENST00000527797 1609 ntTSL 519.84■□□□□ 0.775e-6■■□□□ 11.5
NCBP2P52298 DHCR7-206ENST00000527316 1005 ntTSL 519.74■□□□□ 0.751e-10■■□□□ 11.5
NCBP2P52298 ATP5A1-216ENST00000591267 460 ntTSL 519.72■□□□□ 0.755e-6■■□□□ 11.5
NCBP2P52298 VPS28-209ENST00000528142 1821 ntTSL 319.58■□□□□ 0.725e-6■■□□□ 11.5
NCBP2P52298 DHCR7-208ENST00000529990 525 ntTSL 419.54■□□□□ 0.721e-10■■□□□ 11.5
NCBP2P52298 VPS28-206ENST00000526734 570 ntTSL 218.9■□□□□ 0.625e-6■■□□□ 11.5
NCBP2P52298 VPS28-213ENST00000530983 2337 ntTSL 518.14■□□□□ 0.495e-6■■□□□ 11.5
NCBP2P52298 GABBR1-208ENST00000472823 4286 ntTSL 518.03■□□□□ 0.485e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-208ENST00000589252 662 ntTSL 517.79■□□□□ 0.445e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-213ENST00000590406 756 ntTSL 317.79■□□□□ 0.445e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-207ENST00000588390 556 ntTSL 1 (best)17.79■□□□□ 0.445e-6■■□□□ 11.5
NCBP2P52298 VPS28-207ENST00000526977 2036 ntTSL 517.71■□□□□ 0.425e-6■■□□□ 11.5
NCBP2P52298 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.55■□□□□ 0.45e-6■■□□□ 11.5
NCBP2P52298 NME3-207ENST00000564628 811 ntTSL 517.34■□□□□ 0.375e-6■■□□□ 11.5
NCBP2P52298 NFE2L1-216ENST00000583060 477 ntTSL 317.31■□□□□ 0.365e-6■■□□□ 11.5
NCBP2P52298 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.73■□□□□ 0.275e-6■■□□□ 11.5
NCBP2P52298 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.242e-9■■□□□ 11.5
NCBP2P52298 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.235e-6■■□□□ 11.5
NCBP2P52298 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.211e-10■■□□□ 11.5
NCBP2P52298 RHOT2-215ENST00000566965 879 ntTSL 516.26■□□□□ 0.195e-6■■□□□ 11.5
NCBP2P52298 NME3-205ENST00000563854 583 ntTSL 516.13■□□□□ 0.175e-6■■□□□ 11.5
NCBP2P52298 DHCR7-205ENST00000526780 968 ntTSL 215.82■□□□□ 0.125e-6■■□□□ 11.5
NCBP2P52298 PGGHG-207ENST00000482937 734 ntTSL 515.53■□□□□ 0.085e-6■■□□□ 11.5
NCBP2P52298 NFE2L1-223ENST00000585299 537 ntTSL 415.43■□□□□ 0.065e-6■■□□□ 11.5
NCBP2P52298 DHCR7-204ENST00000525346 520 ntTSL 415.4■□□□□ 0.061e-10■■□□□ 11.5
NCBP2P52298 NFE2L1-207ENST00000579481 564 ntTSL 214.97□□□□□ -0.015e-6■■□□□ 11.5
NCBP2P52298 NFE2L1-215ENST00000582574 556 ntTSL 314.77□□□□□ -0.055e-6■■□□□ 11.5
NCBP2P52298 NFE2L1-221ENST00000585062 556 ntTSL 414.65□□□□□ -0.065e-6■■□□□ 11.5
NCBP2P52298 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.091e-10■■□□□ 11.5
NCBP2P52298 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.155e-6■■□□□ 11.5
NCBP2P52298 NME3-211ENST00000568561 813 ntTSL 1 (best)13.97□□□□□ -0.175e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-217ENST00000591981 565 ntTSL 413.54□□□□□ -0.245e-6■■□□□ 11.5
NCBP2P52298 GABBR1-218ENST00000491829 4212 ntTSL 513.46□□□□□ -0.265e-6■■□□□ 11.5
NCBP2P52298 VPS28-215ENST00000531924 695 ntTSL 313.38□□□□□ -0.275e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-211ENST00000590156 1931 ntTSL 213.33□□□□□ -0.285e-6■■□□□ 11.5
NCBP2P52298 ATP5A1-210ENST00000589869 910 ntTSL 313.23□□□□□ -0.295e-6■■□□□ 11.5
NCBP2P52298 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.311e-9■■□□□ 11.5
NCBP2P52298 DHCR7-207ENST00000527452 579 ntTSL 413.1□□□□□ -0.311e-10■■□□□ 11.5
NCBP2P52298 C22orf34-205ENST00000416411 542 ntTSL 412.89□□□□□ -0.355e-6■■□□□ 11.5
NCBP2P52298 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.375e-6■■□□□ 11.5
NCBP2P52298 CDK12-209ENST00000584632 4165 ntTSL 512.76□□□□□ -0.372e-24■■□□□ 11.5
NCBP2P52298 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.75□□□□□ -0.375e-6■■□□□ 11.5
Retrieved 100 of 18,329 protein–RNA pairs in 103.9 ms