RNA–Protein interactions for RNA: ENST00000377034.8

GABBR1-205, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABBR1, Length 4,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-205ENST00000377034 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
GABBR1-205ENST00000377034 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
GABBR1-205ENST00000377034 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
GABBR1-205ENST00000377034 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
GABBR1-205ENST00000377034 EHMT2Q96KQ7 1210 aa27.36■■□□□ 1.97
GABBR1-205ENST00000377034 PCGF6Q9BYE7 350 aa27.24■■□□□ 1.95
GABBR1-205ENST00000377034 FAM9AQ8IZU1 332 aaPredicted RBP26.84■■□□□ 1.89
GABBR1-205ENST00000377034 PELP1Q8IZL8 1130 aaKnown RBP26.52■■□□□ 1.84
GABBR1-205ENST00000377034 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
GABBR1-205ENST00000377034 HRCP23327 699 aa26.38■■□□□ 1.81
GABBR1-205ENST00000377034 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
GABBR1-205ENST00000377034 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
GABBR1-205ENST00000377034 APLP2Q06481 763 aa26.26■■□□□ 1.79
GABBR1-205ENST00000377034 CCER1Q8TC90 406 aaPredicted RBP26.19■■□□□ 1.78
GABBR1-205ENST00000377034 CENPBP07199 599 aaPredicted RBP26.13■■□□□ 1.77
GABBR1-205ENST00000377034 PPARGC1BQ86YN6 1023 aaKnown RBP26.08■■□□□ 1.77
GABBR1-205ENST00000377034 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
GABBR1-205ENST00000377034 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
GABBR1-205ENST00000377034 TRIM26Q12899 539 aaPredicted RBP25.98■■□□□ 1.75
GABBR1-205ENST00000377034 RANGAP1P46060 587 aaPredicted RBP25.89■■□□□ 1.74
GABBR1-205ENST00000377034 MYT1Q01538 1121 aa25.81■■□□□ 1.72
GABBR1-205ENST00000377034 YTHDC1Q96MU7 727 aaKnown RBP25.76■■□□□ 1.71
GABBR1-205ENST00000377034 UBTFP17480 764 aaKnown RBP25.75■■□□□ 1.71
GABBR1-205ENST00000377034 ATP1B4Q9UN42 357 aaPredicted RBP25.32■■□□□ 1.64
GABBR1-205ENST00000377034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.28■■□□□ 1.64
GABBR1-205ENST00000377034 ERICH6Q7L0X2 663 aa25.25■■□□□ 1.63
GABBR1-205ENST00000377034 HNRNPUL2Q1KMD3 747 aaKnown RBP25.16■■□□□ 1.62
GABBR1-205ENST00000377034 NEFLP07196 543 aa25.16■■□□□ 1.62
GABBR1-205ENST00000377034 DIEXFQ68CQ4 756 aaKnown RBP25.1■■□□□ 1.61
GABBR1-205ENST00000377034 ITGAEP38570 1179 aa25■■□□□ 1.59
GABBR1-205ENST00000377034 GTF3C3Q9Y5Q9 886 aa24.9■■□□□ 1.58
GABBR1-205ENST00000377034 SCAF1Q9H7N4 1312 aaKnown RBP24.83■■□□□ 1.57
GABBR1-205ENST00000377034 ACIN1Q9UKV3 1341 aaKnown RBP24.71■■□□□ 1.55
GABBR1-205ENST00000377034 ZNF316A6NFI3 1004 aaPredicted RBP24.49■■□□□ 1.51
GABBR1-205ENST00000377034 NEUROD1Q13562 356 aa24.46■■□□□ 1.51
GABBR1-205ENST00000377034 CNGB1Q14028 1251 aaPredicted RBP24.45■■□□□ 1.5
GABBR1-205ENST00000377034 POLR3GLQ9BT43 218 aa24.45■■□□□ 1.5
GABBR1-205ENST00000377034 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
GABBR1-205ENST00000377034 BCANQ96GW7 911 aa24.38■■□□□ 1.49
GABBR1-205ENST00000377034 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
GABBR1-205ENST00000377034 FAM50AQ14320 339 aaKnown RBP24.28■■□□□ 1.48
GABBR1-205ENST00000377034 ABCC9O60706 1549 aa24.27■■□□□ 1.48
GABBR1-205ENST00000377034 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
GABBR1-205ENST00000377034 PABPN1Q86U42 306 aaKnown RBP eCLIP24.24■■□□□ 1.47
GABBR1-205ENST00000377034 CSRNP3Q8WYN3 585 aa24.23■■□□□ 1.47
GABBR1-205ENST00000377034 DAXXQ9UER7 740 aaPredicted RBP24.07■■□□□ 1.44
GABBR1-205ENST00000377034 ANP32CO43423 234 aa24.04■■□□□ 1.44
GABBR1-205ENST00000377034 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
GABBR1-205ENST00000377034 RTL5Q5HYW3 569 aaPredicted RBP23.92■■□□□ 1.42
GABBR1-205ENST00000377034 CDK11AQ9UQ88 783 aaPredicted RBP23.87■■□□□ 1.41
GABBR1-205ENST00000377034 MIER1Q8N108 512 aa23.86■■□□□ 1.41
GABBR1-205ENST00000377034 P3H3Q8IVL6 736 aa23.82■■□□□ 1.4
GABBR1-205ENST00000377034 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
GABBR1-205ENST00000377034 FKBP8Q14318 412 aa23.79■■□□□ 1.4
GABBR1-205ENST00000377034 MYT1LQ9UL68 1186 aa23.75■■□□□ 1.39
GABBR1-205ENST00000377034 ZNF326Q5BKZ1 582 aaKnown RBP23.75■■□□□ 1.39
GABBR1-205ENST00000377034 DDX10Q13206 875 aaKnown RBP23.73■■□□□ 1.39
GABBR1-205ENST00000377034 CLSPNQ9HAW4 1339 aa23.68■■□□□ 1.38
GABBR1-205ENST00000377034 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
GABBR1-205ENST00000377034 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
GABBR1-205ENST00000377034 HNRNPUQ00839 825 aaKnown RBP eCLIP23.56■■□□□ 1.36
GABBR1-205ENST00000377034 SLC4A1APQ9BWU0 796 aaKnown RBP23.55■■□□□ 1.36
GABBR1-205ENST00000377034 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
GABBR1-205ENST00000377034 ANP32EQ9BTT0 268 aa23.48■■□□□ 1.35
GABBR1-205ENST00000377034 TONSLQ96HA7 1378 aa23.48■■□□□ 1.35
GABBR1-205ENST00000377034 HIRIP3Q9BW71 556 aaPredicted RBP23.47■■□□□ 1.35
GABBR1-205ENST00000377034 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
GABBR1-205ENST00000377034 BCL11AQ9H165 835 aa23.44■■□□□ 1.34
GABBR1-205ENST00000377034 CLIP1P30622 1438 aa23.44■■□□□ 1.34
GABBR1-205ENST00000377034 FAM9BQ8IZU0 186 aa23.41■■□□□ 1.34
GABBR1-205ENST00000377034 ANP32AP39687 249 aaKnown RBP23.4■■□□□ 1.34
GABBR1-205ENST00000377034 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
GABBR1-205ENST00000377034 IRX6P78412 446 aaPredicted RBP23.33■■□□□ 1.33
GABBR1-205ENST00000377034 FBLN2P98095 1184 aa23.26■■□□□ 1.31
GABBR1-205ENST00000377034 CHIC2Q9UKJ5 165 aa23.25■■□□□ 1.31
GABBR1-205ENST00000377034 ZNF777Q9ULD5 760 aaPredicted RBP23.25■■□□□ 1.31
GABBR1-205ENST00000377034 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
GABBR1-205ENST00000377034 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
GABBR1-205ENST00000377034 SALL2Q9Y467 1007 aaPredicted RBP23.2■■□□□ 1.31
GABBR1-205ENST00000377034 EEA1Q15075 1411 aa23.2■■□□□ 1.3
GABBR1-205ENST00000377034 MRS2Q9HD23 443 aa23.18■■□□□ 1.3
GABBR1-205ENST00000377034 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
GABBR1-205ENST00000377034 NBR1Q14596 966 aa23.17■■□□□ 1.3
GABBR1-205ENST00000377034 CCDC136Q96JN2 1154 aa23.16■■□□□ 1.3
GABBR1-205ENST00000377034 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
GABBR1-205ENST00000377034 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
GABBR1-205ENST00000377034 TMC1Q8TDI8 760 aa23.08■■□□□ 1.29
GABBR1-205ENST00000377034 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
GABBR1-205ENST00000377034 RB1CC1Q8TDY2 1594 aa23.04■■□□□ 1.28
GABBR1-205ENST00000377034 ZBTB47Q9UFB7 747 aaPredicted RBP23.03■■□□□ 1.28
GABBR1-205ENST00000377034 MTUS2Q5JR59 1369 aa23.03■■□□□ 1.28
GABBR1-205ENST00000377034 SIN3AQ96ST3 1273 aa23.03■■□□□ 1.28
GABBR1-205ENST00000377034 EIF4G2P78344 907 aaKnown RBP eCLIP23.01■■□□□ 1.27
GABBR1-205ENST00000377034 SOGA1O94964 1423 aa23■■□□□ 1.27
GABBR1-205ENST00000377034 RRP7BPQ9NSQ0 103 aa22.99■■□□□ 1.27
GABBR1-205ENST00000377034 SENP3-EIF4A1A0A087X0R7 540 aa22.97■■□□□ 1.27
GABBR1-205ENST00000377034 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
GABBR1-205ENST00000377034 EIF5BO60841 1220 aaKnown RBP22.96■■□□□ 1.27
GABBR1-205ENST00000377034 TSHZ2Q9NRE2 1034 aa22.95■■□□□ 1.26
GABBR1-205ENST00000377034 KDM2AQ9Y2K7 1162 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms