RNA–Protein interactions for RNA: ENST00000560703.1

MRPL46-205, Transcript of mitochondrial ribosomal protein L46, humanhuman

TSL 3

Gene MRPL46, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL46-205ENST00000560703 NISCHQ9Y2I1 1504 aa47.93■■■■■ 5.26
MRPL46-205ENST00000560703 ABCC9O60706 1549 aa44.26■■■■■ 4.68
MRPL46-205ENST00000560703 CCDC180Q9P1Z9 1646 aa43.26■■■■■ 4.52
MRPL46-205ENST00000560703 DNAJC5BQ9UF47 199 aa42.36■■■■■ 4.37
MRPL46-205ENST00000560703 RB1CC1Q8TDY2 1594 aa41.69■■■■■ 4.26
MRPL46-205ENST00000560703 NACADO15069 1562 aa41.2■■■■■ 4.19
MRPL46-205ENST00000560703 PABPN1Q86U42 306 aaKnown RBP eCLIP41.16■■■■■ 4.18
MRPL46-205ENST00000560703 DCAF8L2P0C7V8 631 aa41.03■■■■■ 4.16
MRPL46-205ENST00000560703 UNC13AQ9UPW8 1703 aa40.59■■■■■ 4.09
MRPL46-205ENST00000560703 BICRAQ9NZM4 1560 aa40.48■■■■■ 4.07
MRPL46-205ENST00000560703 MYO15BQ96JP2 1530 aa40.34■■■■■ 4.05
MRPL46-205ENST00000560703 CECR2Q9BXF3 1484 aa39.97■■■■□ 3.99
MRPL46-205ENST00000560703 CC2D2AQ9P2K1 1620 aa39.87■■■■□ 3.97
MRPL46-205ENST00000560703 SHROOM4Q9ULL8 1493 aa39.86■■■■□ 3.97
MRPL46-205ENST00000560703 EIF4G1Q04637 1599 aaKnown RBP39.58■■■■□ 3.93
MRPL46-205ENST00000560703 DNAJC5Q9H3Z4 198 aa39.55■■■■□ 3.92
MRPL46-205ENST00000560703 DCAF1Q9Y4B6 1507 aa39.5■■■■□ 3.91
MRPL46-205ENST00000560703 ZCCHC6Q5VYS8 1495 aaKnown RBP39.5■■■■□ 3.91
MRPL46-205ENST00000560703 SCRIBQ14160 1630 aa39.43■■■■□ 3.9
MRPL46-205ENST00000560703 CUX2O14529 1486 aa38.47■■■■□ 3.75
MRPL46-205ENST00000560703 ERCC6Q03468 1493 aa38.3■■■■□ 3.72
MRPL46-205ENST00000560703 NCAPD3P42695 1498 aa38.1■■■■□ 3.69
MRPL46-205ENST00000560703 ATAD2BQ9ULI0 1458 aa37.85■■■■□ 3.65
MRPL46-205ENST00000560703 NESP48681 1621 aa37.76■■■■□ 3.63
MRPL46-205ENST00000560703 SMARCA2P51531 1590 aa37.67■■■■□ 3.62
MRPL46-205ENST00000560703 HMGXB3Q12766 1538 aa37.66■■■■□ 3.62
MRPL46-205ENST00000560703 SMARCA4P51532 1647 aa37.52■■■■□ 3.6
MRPL46-205ENST00000560703 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
MRPL46-205ENST00000560703 THOC2Q8NI27 1593 aaKnown RBP37.45■■■■□ 3.59
MRPL46-205ENST00000560703 BAZ1BQ9UIG0 1483 aaKnown RBP37.44■■■■□ 3.58
MRPL46-205ENST00000560703 LAMC3Q9Y6N6 1575 aa37.3■■■■□ 3.56
MRPL46-205ENST00000560703 BAZ1AQ9NRL2 1556 aaPredicted RBP37.24■■■■□ 3.55
MRPL46-205ENST00000560703 PDS5BQ9NTI5 1447 aa37.23■■■■□ 3.55
MRPL46-205ENST00000560703 PEG3Q9GZU2 1588 aa37.16■■■■□ 3.54
MRPL46-205ENST00000560703 KIF21AQ7Z4S6 1674 aa37.12■■■■□ 3.53
MRPL46-205ENST00000560703 CADPSQ9ULU8 1353 aa36.93■■■■□ 3.5
MRPL46-205ENST00000560703 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
MRPL46-205ENST00000560703 MRC2Q9UBG0 1479 aa36.9■■■■□ 3.5
MRPL46-205ENST00000560703 WDR62O43379 1518 aa36.8■■■■□ 3.48
MRPL46-205ENST00000560703 OSCARQ8IYS5 282 aa36.71■■■■□ 3.47
MRPL46-205ENST00000560703 CEP164Q9UPV0 1460 aa36.58■■■■□ 3.45
MRPL46-205ENST00000560703 FANCD2Q9BXW9 1451 aa36.48■■■■□ 3.43
MRPL46-205ENST00000560703 WIZO95785 1651 aa36.39■■■■□ 3.42
MRPL46-205ENST00000560703 CFTRP13569 1480 aa36.3■■■■□ 3.4
MRPL46-205ENST00000560703 URB2Q14146 1524 aaKnown RBP36.2■■■■□ 3.39
MRPL46-205ENST00000560703 RIMBP3CA6NJZ7 1639 aa36.14■■■■□ 3.38
MRPL46-205ENST00000560703 RIMBP3BA6NNM3 1639 aa36.14■■■■□ 3.38
MRPL46-205ENST00000560703 RIMBP3Q9UFD9 1639 aa36.14■■■■□ 3.38
MRPL46-205ENST00000560703 ARHGEF11O15085 1522 aa35.98■■■■□ 3.35
MRPL46-205ENST00000560703 CYB5RLQ6IPT4 315 aa35.92■■■■□ 3.34
MRPL46-205ENST00000560703 ZNF608Q9ULD9 1512 aaPredicted RBP35.92■■■■□ 3.34
MRPL46-205ENST00000560703 IFT140Q96RY7 1462 aa35.9■■■■□ 3.34
MRPL46-205ENST00000560703 RSF1Q96T23 1441 aaPredicted RBP35.89■■■■□ 3.34
MRPL46-205ENST00000560703 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
MRPL46-205ENST00000560703 TRHP20396 242 aaPredicted RBP35.81■■■■□ 3.32
MRPL46-205ENST00000560703 TOPBP1Q92547 1522 aa35.67■■■■□ 3.3
MRPL46-205ENST00000560703 PRDM2Q13029 1718 aa35.64■■■■□ 3.3
MRPL46-205ENST00000560703 EIF4G3O43432 1585 aaKnown RBP35.59■■■■□ 3.29
MRPL46-205ENST00000560703 ARAP1Q96P48 1450 aa35.58■■■■□ 3.29
MRPL46-205ENST00000560703 ABCC8Q09428 1581 aa35.56■■■■□ 3.28
MRPL46-205ENST00000560703 FBLN2P98095 1184 aa35.56■■■■□ 3.28
MRPL46-205ENST00000560703 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
MRPL46-205ENST00000560703 AQRO60306 1485 aaKnown RBP eCLIP35.53■■■■□ 3.288e-9■■■■■ 32
MRPL46-205ENST00000560703 CHD1O14646 1710 aa35.46■■■■□ 3.27
MRPL46-205ENST00000560703 DNMBPQ6XZF7 1577 aa35.42■■■■□ 3.26
MRPL46-205ENST00000560703 AEBP2Q6ZN18 517 aaPredicted RBP35.42■■■■□ 3.26
MRPL46-205ENST00000560703 TARBP1Q13395 1621 aaKnown RBP35.36■■■■□ 3.25
MRPL46-205ENST00000560703 POLA1P09884 1462 aaPredicted RBP35.26■■■■□ 3.23
MRPL46-205ENST00000560703 TDRD9Q8NDG6 1382 aaKnown RBP35.21■■■■□ 3.23
MRPL46-205ENST00000560703 RAD54L2Q9Y4B4 1467 aa35.17■■■■□ 3.22
MRPL46-205ENST00000560703 CHMP7Q8WUX9 453 aaPredicted RBP35.15■■■■□ 3.22
MRPL46-205ENST00000560703 SOGA1O94964 1423 aa35.15■■■■□ 3.22
MRPL46-205ENST00000560703 SNAPC4Q5SXM2 1469 aa35.09■■■■□ 3.21
MRPL46-205ENST00000560703 CLASP1Q7Z460 1538 aa35.09■■■■□ 3.21
MRPL46-205ENST00000560703 SYNJ1O43426 1573 aa35.01■■■■□ 3.2
MRPL46-205ENST00000560703 MAGI1Q96QZ7 1491 aaPredicted RBP34.97■■■■□ 3.19
MRPL46-205ENST00000560703 WDR97A6NE52 1622 aa34.92■■■■□ 3.18
MRPL46-205ENST00000560703 GRIN2BQ13224 1484 aa34.9■■■■□ 3.18
MRPL46-205ENST00000560703 FGD5Q6ZNL6 1462 aa34.9■■■■□ 3.18
MRPL46-205ENST00000560703 SYNJ2O15056 1496 aa34.88■■■■□ 3.17
MRPL46-205ENST00000560703 GAPVD1Q14C86 1478 aa34.85■■■■□ 3.17
MRPL46-205ENST00000560703 CUX1P39880 1505 aa34.73■■■■□ 3.15
MRPL46-205ENST00000560703 PBRM1Q86U86 1689 aa34.55■■■■□ 3.12
MRPL46-205ENST00000560703 ERCC6L2Q5T890 1561 aa34.5■■■■□ 3.11
MRPL46-205ENST00000560703 ABCA10Q8WWZ4 1543 aa34.46■■■■□ 3.11
MRPL46-205ENST00000560703 GRIN2AQ12879 1464 aa34.42■■■■□ 3.1
MRPL46-205ENST00000560703 ABCA5Q8WWZ7 1642 aa34.41■■■■□ 3.1
MRPL46-205ENST00000560703 CEP170Q5SW79 1584 aa34.38■■■■□ 3.09
MRPL46-205ENST00000560703 NUP160Q12769 1436 aa34.35■■■■□ 3.09
MRPL46-205ENST00000560703 ADAMTS12P58397 1594 aa34.23■■■■□ 3.07
MRPL46-205ENST00000560703 WRNQ14191 1432 aaPredicted RBP eCLIP34.22■■■■□ 3.07
MRPL46-205ENST00000560703 SHROOM2Q13796 1616 aa34.21■■■■□ 3.07
MRPL46-205ENST00000560703 FHAD1B1AJZ9 1412 aa34.2■■■■□ 3.06
MRPL46-205ENST00000560703 KIF13AQ9H1H9 1805 aa34.19■■■■□ 3.06
MRPL46-205ENST00000560703 FAM69CQ0P6D2 419 aa34.16■■■■□ 3.06
MRPL46-205ENST00000560703 PRG4Q92954 1404 aaPredicted RBP34.14■■■■□ 3.06
MRPL46-205ENST00000560703 JPH4Q96JJ6 628 aa34.11■■■■□ 3.05
MRPL46-205ENST00000560703 NPM1P06748 294 aaKnown RBP eCLIP34.09■■■■□ 3.05
MRPL46-205ENST00000560703 ABCC10Q5T3U5 1492 aa34.06■■■■□ 3.04
MRPL46-205ENST00000560703 ERICH3Q5RHP9 1530 aa34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms