RNA–Protein interactions for RNA: ENST00000377016.8

GABBR1-204, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5 BASIC

Gene GABBR1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-204ENST00000377016 NISCHQ9Y2I1 1504 aa33.14■■■□□ 2.9
GABBR1-204ENST00000377016 DCAF8L2P0C7V8 631 aa31.08■■■□□ 2.57
GABBR1-204ENST00000377016 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
GABBR1-204ENST00000377016 SHROOM4Q9ULL8 1493 aa30.75■■■□□ 2.51
GABBR1-204ENST00000377016 PCGF6Q9BYE7 350 aa29.55■■■□□ 2.32
GABBR1-204ENST00000377016 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
GABBR1-204ENST00000377016 HRCP23327 699 aa28.92■■■□□ 2.22
GABBR1-204ENST00000377016 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
GABBR1-204ENST00000377016 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
GABBR1-204ENST00000377016 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
GABBR1-204ENST00000377016 LOC105371045A0A1W2PR82 267 aa28.53■■■□□ 2.16
GABBR1-204ENST00000377016 ZEB1P37275 1124 aaPredicted RBP28.52■■■□□ 2.16
GABBR1-204ENST00000377016 PPARGC1BQ86YN6 1023 aaKnown RBP28.44■■■□□ 2.14
GABBR1-204ENST00000377016 TRIM26Q12899 539 aaPredicted RBP28.42■■■□□ 2.14
GABBR1-204ENST00000377016 TTBK1Q5TCY1 1321 aaPredicted RBP28.32■■■□□ 2.12
GABBR1-204ENST00000377016 CCER1Q8TC90 406 aaPredicted RBP28.17■■■□□ 2.1
GABBR1-204ENST00000377016 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
GABBR1-204ENST00000377016 CENPBP07199 599 aaPredicted RBP27.95■■■□□ 2.06
GABBR1-204ENST00000377016 APLP2Q06481 763 aa27.93■■■□□ 2.06
GABBR1-204ENST00000377016 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
GABBR1-204ENST00000377016 UBTFP17480 764 aaKnown RBP27.72■■■□□ 2.03
GABBR1-204ENST00000377016 RANGAP1P46060 587 aaPredicted RBP27.62■■■□□ 2.01
GABBR1-204ENST00000377016 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
GABBR1-204ENST00000377016 YTHDC1Q96MU7 727 aaKnown RBP27.53■■■□□ 2
GABBR1-204ENST00000377016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
GABBR1-204ENST00000377016 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
GABBR1-204ENST00000377016 DIEXFQ68CQ4 756 aaKnown RBP27.25■■□□□ 1.95
GABBR1-204ENST00000377016 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
GABBR1-204ENST00000377016 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
GABBR1-204ENST00000377016 MYT1Q01538 1121 aa27.04■■□□□ 1.92
GABBR1-204ENST00000377016 GTF3C3Q9Y5Q9 886 aa26.96■■□□□ 1.91
GABBR1-204ENST00000377016 ABCC9O60706 1549 aa26.93■■□□□ 1.9
GABBR1-204ENST00000377016 ATP1B4Q9UN42 357 aaPredicted RBP26.87■■□□□ 1.89
GABBR1-204ENST00000377016 ACIN1Q9UKV3 1341 aaKnown RBP26.87■■□□□ 1.89
GABBR1-204ENST00000377016 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
GABBR1-204ENST00000377016 ITGAEP38570 1179 aa26.77■■□□□ 1.88
GABBR1-204ENST00000377016 SCAF1Q9H7N4 1312 aaKnown RBP26.73■■□□□ 1.87
GABBR1-204ENST00000377016 ZNF316A6NFI3 1004 aaPredicted RBP26.7■■□□□ 1.87
GABBR1-204ENST00000377016 RSF1Q96T23 1441 aaPredicted RBP26.68■■□□□ 1.86
GABBR1-204ENST00000377016 NEFLP07196 543 aa26.65■■□□□ 1.86
GABBR1-204ENST00000377016 CSRNP3Q8WYN3 585 aa26.62■■□□□ 1.85
GABBR1-204ENST00000377016 NEUROD1Q13562 356 aa26.59■■□□□ 1.85
GABBR1-204ENST00000377016 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
GABBR1-204ENST00000377016 ERICH6Q7L0X2 663 aa26.47■■□□□ 1.83
GABBR1-204ENST00000377016 RB1CC1Q8TDY2 1594 aa26.18■■□□□ 1.78
GABBR1-204ENST00000377016 FAM50AQ14320 339 aaKnown RBP26.15■■□□□ 1.78
GABBR1-204ENST00000377016 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
GABBR1-204ENST00000377016 MIER1Q8N108 512 aa26.12■■□□□ 1.77
GABBR1-204ENST00000377016 BCANQ96GW7 911 aa26.11■■□□□ 1.77
GABBR1-204ENST00000377016 CECR2Q9BXF3 1484 aa26.08■■□□□ 1.77
GABBR1-204ENST00000377016 TNIKQ9UKE5 1360 aa25.92■■□□□ 1.74
GABBR1-204ENST00000377016 CLIP1P30622 1438 aa25.91■■□□□ 1.74
GABBR1-204ENST00000377016 EEA1Q15075 1411 aa25.89■■□□□ 1.73
GABBR1-204ENST00000377016 ANP32CO43423 234 aa25.86■■□□□ 1.73
GABBR1-204ENST00000377016 GOLGA3Q08378 1498 aa25.85■■□□□ 1.73
GABBR1-204ENST00000377016 CNGB1Q14028 1251 aaPredicted RBP25.84■■□□□ 1.73
GABBR1-204ENST00000377016 POLR3GLQ9BT43 218 aa25.84■■□□□ 1.73
GABBR1-204ENST00000377016 NACADO15069 1562 aa25.83■■□□□ 1.73
GABBR1-204ENST00000377016 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.72
GABBR1-204ENST00000377016 CLSPNQ9HAW4 1339 aa25.8■■□□□ 1.72
GABBR1-204ENST00000377016 P3H3Q8IVL6 736 aa25.77■■□□□ 1.72
GABBR1-204ENST00000377016 SOGA1O94964 1423 aa25.76■■□□□ 1.72
GABBR1-204ENST00000377016 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
GABBR1-204ENST00000377016 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.71
GABBR1-204ENST00000377016 DDX10Q13206 875 aaKnown RBP25.7■■□□□ 1.71
GABBR1-204ENST00000377016 FKBP8Q14318 412 aa25.68■■□□□ 1.7
GABBR1-204ENST00000377016 TRIM52Q96A61 297 aa25.68■■□□□ 1.7
GABBR1-204ENST00000377016 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
GABBR1-204ENST00000377016 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
GABBR1-204ENST00000377016 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
GABBR1-204ENST00000377016 CDK11AQ9UQ88 783 aaPredicted RBP25.54■■□□□ 1.68
GABBR1-204ENST00000377016 WIZO95785 1651 aa25.53■■□□□ 1.68
GABBR1-204ENST00000377016 HIRIP3Q9BW71 556 aaPredicted RBP25.46■■□□□ 1.67
GABBR1-204ENST00000377016 TONSLQ96HA7 1378 aa25.45■■□□□ 1.66
GABBR1-204ENST00000377016 HNRNPUQ00839 825 aaKnown RBP eCLIP25.38■■□□□ 1.65
GABBR1-204ENST00000377016 VPS8Q8N3P4 1428 aa25.36■■□□□ 1.65
GABBR1-204ENST00000377016 SUPT16HQ9Y5B9 1047 aaKnown RBP25.35■■□□□ 1.65
GABBR1-204ENST00000377016 ZNF326Q5BKZ1 582 aaKnown RBP25.33■■□□□ 1.65
GABBR1-204ENST00000377016 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
GABBR1-204ENST00000377016 ARID3CA6NKF2 412 aa25.29■■□□□ 1.64
GABBR1-204ENST00000377016 RTL5Q5HYW3 569 aaPredicted RBP25.28■■□□□ 1.64
GABBR1-204ENST00000377016 DAXXQ9UER7 740 aaPredicted RBP25.24■■□□□ 1.63
GABBR1-204ENST00000377016 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
GABBR1-204ENST00000377016 TOP2AP11388 1531 aaKnown RBP25.24■■□□□ 1.63
GABBR1-204ENST00000377016 KANK4Q5T7N3 995 aaPredicted RBP25.21■■□□□ 1.63
GABBR1-204ENST00000377016 SIN3AQ96ST3 1273 aa25.2■■□□□ 1.63
GABBR1-204ENST00000377016 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
GABBR1-204ENST00000377016 CCNB3Q8WWL7 1395 aa25.19■■□□□ 1.62
GABBR1-204ENST00000377016 FAM9BQ8IZU0 186 aa25.17■■□□□ 1.62
GABBR1-204ENST00000377016 IRX6P78412 446 aaPredicted RBP25.16■■□□□ 1.62
GABBR1-204ENST00000377016 CHIC2Q9UKJ5 165 aa25.15■■□□□ 1.62
GABBR1-204ENST00000377016 MTUS2Q5JR59 1369 aa25.11■■□□□ 1.61
GABBR1-204ENST00000377016 ANP32EQ9BTT0 268 aa25.1■■□□□ 1.61
GABBR1-204ENST00000377016 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
GABBR1-204ENST00000377016 MRS2Q9HD23 443 aa25.01■■□□□ 1.59
GABBR1-204ENST00000377016 RRP7BPQ9NSQ0 103 aa24.97■■□□□ 1.59
GABBR1-204ENST00000377016 ANP32AP39687 249 aaKnown RBP24.97■■□□□ 1.59
GABBR1-204ENST00000377016 SMARCA4P51532 1647 aa24.96■■□□□ 1.59
GABBR1-204ENST00000377016 EIF4G2P78344 907 aaKnown RBP eCLIP24.95■■□□□ 1.58
GABBR1-204ENST00000377016 DHX57Q6P158 1386 aaKnown RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms