RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 NISCHQ9Y2I1 1504 aa14.19□□□□□ -0.14
ABCD3-202ENST00000370214 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
ABCD3-202ENST00000370214 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
ABCD3-202ENST00000370214 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
ABCD3-202ENST00000370214 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
ABCD3-202ENST00000370214 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
ABCD3-202ENST00000370214 LOC105371045A0A1W2PR82 267 aa12.29□□□□□ -0.44
ABCD3-202ENST00000370214 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
ABCD3-202ENST00000370214 CHIC1Q5VXU3 224 aa12.25□□□□□ -0.45
ABCD3-202ENST00000370214 FAM9AQ8IZU1 332 aaPredicted RBP12.21□□□□□ -0.45
ABCD3-202ENST00000370214 CCDC180Q9P1Z9 1646 aa12.18□□□□□ -0.46
ABCD3-202ENST00000370214 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
ABCD3-202ENST00000370214 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
ABCD3-202ENST00000370214 HRCP23327 699 aa12□□□□□ -0.49
ABCD3-202ENST00000370214 ZCCHC6Q5VYS8 1495 aaKnown RBP11.91□□□□□ -0.5
ABCD3-202ENST00000370214 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
ABCD3-202ENST00000370214 DCAF1Q9Y4B6 1507 aa11.77□□□□□ -0.52
ABCD3-202ENST00000370214 RANGAP1P46060 587 aaPredicted RBP11.68□□□□□ -0.54
ABCD3-202ENST00000370214 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
ABCD3-202ENST00000370214 ABCC9O60706 1549 aa11.63□□□□□ -0.55
ABCD3-202ENST00000370214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
ABCD3-202ENST00000370214 SCRIBQ14160 1630 aa11.57□□□□□ -0.56
ABCD3-202ENST00000370214 CCER1Q8TC90 406 aaPredicted RBP11.5□□□□□ -0.57
ABCD3-202ENST00000370214 PABPN1Q86U42 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
ABCD3-202ENST00000370214 RSF1Q96T23 1441 aaPredicted RBP11.47□□□□□ -0.57
ABCD3-202ENST00000370214 UBTFP17480 764 aaKnown RBP11.43□□□□□ -0.58
ABCD3-202ENST00000370214 CECR2Q9BXF3 1484 aa11.42□□□□□ -0.58
ABCD3-202ENST00000370214 YTHDC1Q96MU7 727 aaKnown RBP11.39□□□□□ -0.59
ABCD3-202ENST00000370214 RB1CC1Q8TDY2 1594 aa11.35□□□□□ -0.59
ABCD3-202ENST00000370214 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
ABCD3-202ENST00000370214 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
ABCD3-202ENST00000370214 ZEB1P37275 1124 aaPredicted RBP11.27□□□□□ -0.61
ABCD3-202ENST00000370214 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
ABCD3-202ENST00000370214 NEUROD1Q13562 356 aa11.19□□□□□ -0.62
ABCD3-202ENST00000370214 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
ABCD3-202ENST00000370214 ITGAEP38570 1179 aa11.18□□□□□ -0.62
ABCD3-202ENST00000370214 WIZO95785 1651 aa11.15□□□□□ -0.62
ABCD3-202ENST00000370214 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
ABCD3-202ENST00000370214 ABCC8Q09428 1581 aa11.15□□□□□ -0.62
ABCD3-202ENST00000370214 SOGA1O94964 1423 aa11.14□□□□□ -0.63
ABCD3-202ENST00000370214 CCDC88BA6NC98 1476 aa11.11□□□□□ -0.63
ABCD3-202ENST00000370214 APLP2Q06481 763 aa11.1□□□□□ -0.63
ABCD3-202ENST00000370214 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
ABCD3-202ENST00000370214 RUSC2Q8N2Y8 1516 aa11.1□□□□□ -0.63
ABCD3-202ENST00000370214 NACADO15069 1562 aa11.09□□□□□ -0.63
ABCD3-202ENST00000370214 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
ABCD3-202ENST00000370214 ACIN1Q9UKV3 1341 aaKnown RBP11.04□□□□□ -0.64
ABCD3-202ENST00000370214 CEP162Q5TB80 1403 aa11□□□□□ -0.65
ABCD3-202ENST00000370214 MIER1Q8N108 512 aa11□□□□□ -0.65
ABCD3-202ENST00000370214 CENPBP07199 599 aaPredicted RBP10.98□□□□□ -0.65
ABCD3-202ENST00000370214 P3H3Q8IVL6 736 aa10.96□□□□□ -0.66
ABCD3-202ENST00000370214 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
ABCD3-202ENST00000370214 HIRIP3Q9BW71 556 aaPredicted RBP10.91□□□□□ -0.66
ABCD3-202ENST00000370214 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
ABCD3-202ENST00000370214 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
ABCD3-202ENST00000370214 BCANQ96GW7 911 aa10.84□□□□□ -0.67
ABCD3-202ENST00000370214 CNGB1Q14028 1251 aaPredicted RBP10.83□□□□□ -0.68
ABCD3-202ENST00000370214 WRNQ14191 1432 aaPredicted RBP eCLIP10.83□□□□□ -0.68
ABCD3-202ENST00000370214 BAZ1AQ9NRL2 1556 aaPredicted RBP10.83□□□□□ -0.68
ABCD3-202ENST00000370214 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
ABCD3-202ENST00000370214 CLIP1P30622 1438 aa10.81□□□□□ -0.68
ABCD3-202ENST00000370214 ARID3CA6NKF2 412 aa10.81□□□□□ -0.68
ABCD3-202ENST00000370214 FAM50AQ14320 339 aaKnown RBP10.8□□□□□ -0.68
ABCD3-202ENST00000370214 KCNH8Q96L42 1107 aa10.79□□□□□ -0.68
ABCD3-202ENST00000370214 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
ABCD3-202ENST00000370214 RAPGEF2Q9Y4G8 1499 aa10.75□□□□□ -0.69
ABCD3-202ENST00000370214 SMARCA2P51531 1590 aa10.75□□□□□ -0.69
ABCD3-202ENST00000370214 GOLGA3Q08378 1498 aa10.73□□□□□ -0.69
ABCD3-202ENST00000370214 SIN3AQ96ST3 1273 aa10.73□□□□□ -0.69
ABCD3-202ENST00000370214 SMARCA4P51532 1647 aa10.72□□□□□ -0.69
ABCD3-202ENST00000370214 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
ABCD3-202ENST00000370214 PELP1Q8IZL8 1130 aaKnown RBP10.71□□□□□ -0.7
ABCD3-202ENST00000370214 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
ABCD3-202ENST00000370214 SENP3-EIF4A1A0A087X0R7 540 aa10.7□□□□□ -0.7
ABCD3-202ENST00000370214 PEG3Q9GZU2 1588 aa10.69□□□□□ -0.7
ABCD3-202ENST00000370214 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
ABCD3-202ENST00000370214 TRIM52Q96A61 297 aa10.65□□□□□ -0.7
ABCD3-202ENST00000370214 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
ABCD3-202ENST00000370214 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
ABCD3-202ENST00000370214 VPS8Q8N3P4 1428 aa10.61□□□□□ -0.71
ABCD3-202ENST00000370214 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
ABCD3-202ENST00000370214 ATAD2BQ9ULI0 1458 aa10.59□□□□□ -0.71
ABCD3-202ENST00000370214 IRX6P78412 446 aaPredicted RBP10.59□□□□□ -0.71
ABCD3-202ENST00000370214 POLR3GLQ9BT43 218 aa10.58□□□□□ -0.72
ABCD3-202ENST00000370214 EEA1Q15075 1411 aa10.56□□□□□ -0.72
ABCD3-202ENST00000370214 DHX57Q6P158 1386 aaKnown RBP10.55□□□□□ -0.72
ABCD3-202ENST00000370214 FKBP8Q14318 412 aa10.55□□□□□ -0.72
ABCD3-202ENST00000370214 BICRAQ9NZM4 1560 aa10.55□□□□□ -0.72
ABCD3-202ENST00000370214 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
ABCD3-202ENST00000370214 DNAJC5BQ9UF47 199 aa10.53□□□□□ -0.72
ABCD3-202ENST00000370214 KIF21BO75037 1637 aa10.52□□□□□ -0.73
ABCD3-202ENST00000370214 ARAP1Q96P48 1450 aa10.51□□□□□ -0.73
ABCD3-202ENST00000370214 FOXD1Q16676 465 aa10.5□□□□□ -0.73
ABCD3-202ENST00000370214 RRP7BPQ9NSQ0 103 aa10.5□□□□□ -0.73
ABCD3-202ENST00000370214 RAB3GAP2Q9H2M9 1393 aa10.49□□□□□ -0.73
ABCD3-202ENST00000370214 CCNB3Q8WWL7 1395 aa10.48□□□□□ -0.73
ABCD3-202ENST00000370214 CUX2O14529 1486 aa10.48□□□□□ -0.73
ABCD3-202ENST00000370214 ZNF326Q5BKZ1 582 aaKnown RBP10.47□□□□□ -0.73
ABCD3-202ENST00000370214 KIF27Q86VH2 1401 aa10.45□□□□□ -0.74
ABCD3-202ENST00000370214 CARMIL1Q5VZK9 1371 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms