RNA–Protein interactions for RNA: ENST00000491829.5

GABBR1-218, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 4,212 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-218ENST00000491829 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
GABBR1-218ENST00000491829 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
GABBR1-218ENST00000491829 SHROOM4Q9ULL8 1493 aa25.31■■□□□ 1.64
GABBR1-218ENST00000491829 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
GABBR1-218ENST00000491829 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
GABBR1-218ENST00000491829 ABCC9O60706 1549 aa23.56■■□□□ 1.36
GABBR1-218ENST00000491829 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
GABBR1-218ENST00000491829 CCDC180Q9P1Z9 1646 aa23.42■■□□□ 1.34
GABBR1-218ENST00000491829 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
GABBR1-218ENST00000491829 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
GABBR1-218ENST00000491829 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
GABBR1-218ENST00000491829 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
GABBR1-218ENST00000491829 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
GABBR1-218ENST00000491829 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
GABBR1-218ENST00000491829 PCGF6Q9BYE7 350 aa22.77■■□□□ 1.23
GABBR1-218ENST00000491829 TTBK1Q5TCY1 1321 aaPredicted RBP22.62■■□□□ 1.21
GABBR1-218ENST00000491829 PPARGC1BQ86YN6 1023 aaKnown RBP22.53■■□□□ 1.2
GABBR1-218ENST00000491829 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
GABBR1-218ENST00000491829 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
GABBR1-218ENST00000491829 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
GABBR1-218ENST00000491829 RSF1Q96T23 1441 aaPredicted RBP22.36■■□□□ 1.17
GABBR1-218ENST00000491829 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
GABBR1-218ENST00000491829 NACADO15069 1562 aa22.2■■□□□ 1.14
GABBR1-218ENST00000491829 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
GABBR1-218ENST00000491829 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
GABBR1-218ENST00000491829 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
GABBR1-218ENST00000491829 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
GABBR1-218ENST00000491829 HRCP23327 699 aa21.83■■□□□ 1.08
GABBR1-218ENST00000491829 WIZO95785 1651 aa21.81■■□□□ 1.08
GABBR1-218ENST00000491829 APLP2Q06481 763 aa21.77■■□□□ 1.08
GABBR1-218ENST00000491829 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
GABBR1-218ENST00000491829 ATP1B4Q9UN42 357 aaPredicted RBP21.66■■□□□ 1.06
GABBR1-218ENST00000491829 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.06
GABBR1-218ENST00000491829 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
GABBR1-218ENST00000491829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
GABBR1-218ENST00000491829 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
GABBR1-218ENST00000491829 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
GABBR1-218ENST00000491829 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
GABBR1-218ENST00000491829 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
GABBR1-218ENST00000491829 SOGA1O94964 1423 aa21.41■■□□□ 1.02
GABBR1-218ENST00000491829 ITGAEP38570 1179 aa21.4■■□□□ 1.02
GABBR1-218ENST00000491829 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
GABBR1-218ENST00000491829 WRNQ14191 1432 aaPredicted RBP eCLIP21.31■■□□□ 1
GABBR1-218ENST00000491829 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
GABBR1-218ENST00000491829 P3H3Q8IVL6 736 aa21.28■■□□□ 1
GABBR1-218ENST00000491829 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
GABBR1-218ENST00000491829 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
GABBR1-218ENST00000491829 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
GABBR1-218ENST00000491829 SMARCA2P51531 1590 aa21.15■□□□□ 0.98
GABBR1-218ENST00000491829 BICRAQ9NZM4 1560 aa21.15■□□□□ 0.98
GABBR1-218ENST00000491829 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
GABBR1-218ENST00000491829 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
GABBR1-218ENST00000491829 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
GABBR1-218ENST00000491829 CLIP1P30622 1438 aa20.97■□□□□ 0.95
GABBR1-218ENST00000491829 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
GABBR1-218ENST00000491829 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
GABBR1-218ENST00000491829 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
GABBR1-218ENST00000491829 FBLN2P98095 1184 aa20.88■□□□□ 0.93
GABBR1-218ENST00000491829 YTHDC1Q96MU7 727 aaKnown RBP20.87■□□□□ 0.93
GABBR1-218ENST00000491829 EEA1Q15075 1411 aa20.86■□□□□ 0.93
GABBR1-218ENST00000491829 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
GABBR1-218ENST00000491829 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
GABBR1-218ENST00000491829 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
GABBR1-218ENST00000491829 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
GABBR1-218ENST00000491829 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
GABBR1-218ENST00000491829 CUX2O14529 1486 aa20.75■□□□□ 0.91
GABBR1-218ENST00000491829 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
GABBR1-218ENST00000491829 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
GABBR1-218ENST00000491829 KANK4Q5T7N3 995 aaPredicted RBP20.68■□□□□ 0.9
GABBR1-218ENST00000491829 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
GABBR1-218ENST00000491829 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
GABBR1-218ENST00000491829 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
GABBR1-218ENST00000491829 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
GABBR1-218ENST00000491829 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
GABBR1-218ENST00000491829 NESP48681 1621 aa20.58■□□□□ 0.89
GABBR1-218ENST00000491829 VPS8Q8N3P4 1428 aa20.52■□□□□ 0.88
GABBR1-218ENST00000491829 CC2D2AQ9P2K1 1620 aa20.5■□□□□ 0.87
GABBR1-218ENST00000491829 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
GABBR1-218ENST00000491829 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
GABBR1-218ENST00000491829 CFTRP13569 1480 aa20.46■□□□□ 0.87
GABBR1-218ENST00000491829 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.87
GABBR1-218ENST00000491829 CHIC2Q9UKJ5 165 aa20.45■□□□□ 0.86
GABBR1-218ENST00000491829 CUX1P39880 1505 aa20.45■□□□□ 0.86
GABBR1-218ENST00000491829 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
GABBR1-218ENST00000491829 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
GABBR1-218ENST00000491829 TRIM52Q96A61 297 aa20.42■□□□□ 0.86
GABBR1-218ENST00000491829 IGF1RP08069 1367 aa20.41■□□□□ 0.86
GABBR1-218ENST00000491829 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
GABBR1-218ENST00000491829 CENPBP07199 599 aaPredicted RBP20.39■□□□□ 0.86
GABBR1-218ENST00000491829 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
GABBR1-218ENST00000491829 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
GABBR1-218ENST00000491829 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
GABBR1-218ENST00000491829 HIRIP3Q9BW71 556 aaPredicted RBP20.33■□□□□ 0.85
GABBR1-218ENST00000491829 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.84
GABBR1-218ENST00000491829 TOP2BQ02880 1626 aa20.33■□□□□ 0.84
GABBR1-218ENST00000491829 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
GABBR1-218ENST00000491829 PDS5BQ9NTI5 1447 aa20.29■□□□□ 0.84
GABBR1-218ENST00000491829 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
GABBR1-218ENST00000491829 KIF21BO75037 1637 aa20.27■□□□□ 0.83
GABBR1-218ENST00000491829 RRP7BPQ9NSQ0 103 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms