RNA–Protein interactions for RNA: ENST00000588390.1

ATP5A1-207, Transcript of ATP synthase subunit alpha, mitochondrial, humanhuman

TSL 1 (best)

Gene ATP5A1, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5A1-207ENST00000588390 NISCHQ9Y2I1 1504 aa48.27■■■■■ 5.32
ATP5A1-207ENST00000588390 CCDC180Q9P1Z9 1646 aa43.19■■■■■ 4.51
ATP5A1-207ENST00000588390 ABCC9O60706 1549 aa42.71■■■■■ 4.43
ATP5A1-207ENST00000588390 RB1CC1Q8TDY2 1594 aa40.86■■■■■ 4.13
ATP5A1-207ENST00000588390 NACADO15069 1562 aa40.65■■■■■ 4.1
ATP5A1-207ENST00000588390 DCAF8L2P0C7V8 631 aa40.48■■■■■ 4.07
ATP5A1-207ENST00000588390 MYO15BQ96JP2 1530 aa40.21■■■■■ 4.03
ATP5A1-207ENST00000588390 ZCCHC6Q5VYS8 1495 aaKnown RBP40.13■■■■■ 4.01
ATP5A1-207ENST00000588390 UNC13AQ9UPW8 1703 aa40.05■■■■■ 4
ATP5A1-207ENST00000588390 DCAF1Q9Y4B6 1507 aa39.87■■■■□ 3.97
ATP5A1-207ENST00000588390 PABPN1Q86U42 306 aaKnown RBP eCLIP39.78■■■■□ 3.96
ATP5A1-207ENST00000588390 BICRAQ9NZM4 1560 aa39.66■■■■□ 3.94
ATP5A1-207ENST00000588390 DNAJC5BQ9UF47 199 aa39.57■■■■□ 3.93
ATP5A1-207ENST00000588390 SCRIBQ14160 1630 aa39.42■■■■□ 3.9
ATP5A1-207ENST00000588390 SHROOM4Q9ULL8 1493 aa39.12■■■■□ 3.85
ATP5A1-207ENST00000588390 EIF4G1Q04637 1599 aaKnown RBP38.65■■■■□ 3.78
ATP5A1-207ENST00000588390 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.78
ATP5A1-207ENST00000588390 CECR2Q9BXF3 1484 aa38.41■■■■□ 3.74
ATP5A1-207ENST00000588390 SMARCA4P51532 1647 aa37.61■■■■□ 3.61
ATP5A1-207ENST00000588390 NCAPD3P42695 1498 aa37.47■■■■□ 3.59
ATP5A1-207ENST00000588390 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
ATP5A1-207ENST00000588390 BAZ1AQ9NRL2 1556 aaPredicted RBP37.46■■■■□ 3.59
ATP5A1-207ENST00000588390 SMARCA2P51531 1590 aa37.41■■■■□ 3.58
ATP5A1-207ENST00000588390 HMGXB3Q12766 1538 aa37.32■■■■□ 3.57
ATP5A1-207ENST00000588390 MROH2BQ7Z745 1585 aa37.22■■■■□ 3.55
ATP5A1-207ENST00000588390 PEG3Q9GZU2 1588 aa37.21■■■■□ 3.55
ATP5A1-207ENST00000588390 BAZ1BQ9UIG0 1483 aaKnown RBP37.16■■■■□ 3.54
ATP5A1-207ENST00000588390 WIZO95785 1651 aa36.85■■■■□ 3.49
ATP5A1-207ENST00000588390 ERCC6Q03468 1493 aa36.84■■■■□ 3.49
ATP5A1-207ENST00000588390 NESP48681 1621 aa36.83■■■■□ 3.49
ATP5A1-207ENST00000588390 LAMC3Q9Y6N6 1575 aa36.64■■■■□ 3.46
ATP5A1-207ENST00000588390 CUX2O14529 1486 aa36.6■■■■□ 3.45
ATP5A1-207ENST00000588390 RSF1Q96T23 1441 aaPredicted RBP36.56■■■■□ 3.44
ATP5A1-207ENST00000588390 KIF21AQ7Z4S6 1674 aa36.45■■■■□ 3.43
ATP5A1-207ENST00000588390 THOC2Q8NI27 1593 aaKnown RBP36.42■■■■□ 3.42
ATP5A1-207ENST00000588390 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
ATP5A1-207ENST00000588390 CADPSQ9ULU8 1353 aa36.36■■■■□ 3.41
ATP5A1-207ENST00000588390 PDS5BQ9NTI5 1447 aa36.35■■■■□ 3.41
ATP5A1-207ENST00000588390 CFTRP13569 1480 aa36.06■■■■□ 3.36
ATP5A1-207ENST00000588390 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
ATP5A1-207ENST00000588390 CEP164Q9UPV0 1460 aa36.01■■■■□ 3.36
ATP5A1-207ENST00000588390 FANCD2Q9BXW9 1451 aa36■■■■□ 3.35
ATP5A1-207ENST00000588390 WDR62O43379 1518 aa35.98■■■■□ 3.35
ATP5A1-207ENST00000588390 DNAJC5Q9H3Z4 198 aa35.97■■■■□ 3.35
ATP5A1-207ENST00000588390 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
ATP5A1-207ENST00000588390 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
ATP5A1-207ENST00000588390 URB2Q14146 1524 aaKnown RBP35.69■■■■□ 3.3
ATP5A1-207ENST00000588390 TOPBP1Q92547 1522 aa35.38■■■■□ 3.25
ATP5A1-207ENST00000588390 DNMBPQ6XZF7 1577 aa35.32■■■■□ 3.24
ATP5A1-207ENST00000588390 ABCC8Q09428 1581 aa35.28■■■■□ 3.24
ATP5A1-207ENST00000588390 SUPT5HO00267 1087 aaKnown RBP35.27■■■■□ 3.24
ATP5A1-207ENST00000588390 IFT140Q96RY7 1462 aa35.25■■■■□ 3.23
ATP5A1-207ENST00000588390 ZNF608Q9ULD9 1512 aaPredicted RBP35.18■■■■□ 3.22
ATP5A1-207ENST00000588390 EIF4G3O43432 1585 aaKnown RBP35.08■■■■□ 3.21
ATP5A1-207ENST00000588390 TARBP1Q13395 1621 aaKnown RBP35.06■■■■□ 3.2
ATP5A1-207ENST00000588390 POLA1P09884 1462 aaPredicted RBP35.05■■■■□ 3.2
ATP5A1-207ENST00000588390 CUX1P39880 1505 aa34.95■■■■□ 3.19
ATP5A1-207ENST00000588390 RAD54L2Q9Y4B4 1467 aa34.91■■■■□ 3.18
ATP5A1-207ENST00000588390 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
ATP5A1-207ENST00000588390 FGD5Q6ZNL6 1462 aa34.9■■■■□ 3.18
ATP5A1-207ENST00000588390 AQRO60306 1485 aaKnown RBP eCLIP34.9■■■■□ 3.185e-6■□□□□ 10.1
ATP5A1-207ENST00000588390 SOGA1O94964 1423 aa34.85■■■■□ 3.17
ATP5A1-207ENST00000588390 CHD1O14646 1710 aa34.76■■■■□ 3.16
ATP5A1-207ENST00000588390 TDRD9Q8NDG6 1382 aaKnown RBP34.73■■■■□ 3.15
ATP5A1-207ENST00000588390 WDR97A6NE52 1622 aa34.72■■■■□ 3.15
ATP5A1-207ENST00000588390 TRIM41Q8WV44 630 aa34.66■■■■□ 3.14
ATP5A1-207ENST00000588390 SNAPC4Q5SXM2 1469 aa34.59■■■■□ 3.13
ATP5A1-207ENST00000588390 RIMBP3CA6NJZ7 1639 aa34.57■■■■□ 3.12
ATP5A1-207ENST00000588390 RIMBP3BA6NNM3 1639 aa34.57■■■■□ 3.12
ATP5A1-207ENST00000588390 RIMBP3Q9UFD9 1639 aa34.57■■■■□ 3.12
ATP5A1-207ENST00000588390 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
ATP5A1-207ENST00000588390 PBRM1Q86U86 1689 aa34.55■■■■□ 3.12
ATP5A1-207ENST00000588390 FBLN2P98095 1184 aa34.54■■■■□ 3.12
ATP5A1-207ENST00000588390 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
ATP5A1-207ENST00000588390 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
ATP5A1-207ENST00000588390 GRIN2BQ13224 1484 aa34.52■■■■□ 3.12
ATP5A1-207ENST00000588390 ABCA10Q8WWZ4 1543 aa34.51■■■■□ 3.12
ATP5A1-207ENST00000588390 WRNQ14191 1432 aaPredicted RBP eCLIP34.5■■■■□ 3.11
ATP5A1-207ENST00000588390 ABCA5Q8WWZ7 1642 aa34.49■■■■□ 3.11
ATP5A1-207ENST00000588390 MAGI1Q96QZ7 1491 aaPredicted RBP34.49■■■■□ 3.11
ATP5A1-207ENST00000588390 ARHGEF11O15085 1522 aa34.47■■■■□ 3.11
ATP5A1-207ENST00000588390 GAPVD1Q14C86 1478 aa34.46■■■■□ 3.11
ATP5A1-207ENST00000588390 SYNJ2O15056 1496 aa34.36■■■■□ 3.09
ATP5A1-207ENST00000588390 CHMP7Q8WUX9 453 aaPredicted RBP34.34■■■■□ 3.09
ATP5A1-207ENST00000588390 CLASP1Q7Z460 1538 aa34.3■■■■□ 3.08
ATP5A1-207ENST00000588390 ADAMTS12P58397 1594 aa34.21■■■■□ 3.07
ATP5A1-207ENST00000588390 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
ATP5A1-207ENST00000588390 GRIN2AQ12879 1464 aa34.1■■■■□ 3.05
ATP5A1-207ENST00000588390 CYB5RLQ6IPT4 315 aa34.1■■■■□ 3.05
ATP5A1-207ENST00000588390 ERICH3Q5RHP9 1530 aa34.09■■■■□ 3.05
ATP5A1-207ENST00000588390 FHAD1B1AJZ9 1412 aa34.03■■■■□ 3.04
ATP5A1-207ENST00000588390 CEP170Q5SW79 1584 aa34.01■■■■□ 3.03
ATP5A1-207ENST00000588390 NUP160Q12769 1436 aa33.95■■■■□ 3.02
ATP5A1-207ENST00000588390 ERCC6L2Q5T890 1561 aa33.82■■■■□ 3
ATP5A1-207ENST00000588390 SHROOM2Q13796 1616 aa33.81■■■■□ 3
ATP5A1-207ENST00000588390 KIF27Q86VH2 1401 aa33.79■■■■□ 3
ATP5A1-207ENST00000588390 CUL7Q14999 1698 aa33.74■■■□□ 2.99
ATP5A1-207ENST00000588390 RUSC2Q8N2Y8 1516 aa33.73■■■□□ 2.99
ATP5A1-207ENST00000588390 IGF1RP08069 1367 aa33.69■■■□□ 2.98
ATP5A1-207ENST00000588390 TRHP20396 242 aaPredicted RBP33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms