Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.462e-6■□□□□ 10
SND1Q7KZF4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.423e-7■□□□□ 10
SND1Q7KZF4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.382e-6■□□□□ 10
SND1Q7KZF4 RNF121-209ENST00000528683 721 ntTSL 216.75■□□□□ 0.272e-6■□□□□ 10
SND1Q7KZF4 RNF121-204ENST00000490867 840 ntTSL 516.4■□□□□ 0.222e-6■□□□□ 10
SND1Q7KZF4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.181e-10■□□□□ 10
SND1Q7KZF4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.181e-6■□□□□ 10
SND1Q7KZF4 PSMA7-204ENST00000442551 685 ntTSL 315.6■□□□□ 0.092e-6■□□□□ 10
SND1Q7KZF4 PRIM1-204ENST00000549549 456 ntTSL 315.22■□□□□ 0.032e-6■□□□□ 10
SND1Q7KZF4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.014e-9■□□□□ 10
SND1Q7KZF4 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.022e-6■□□□□ 10
SND1Q7KZF4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.034e-9■□□□□ 10
SND1Q7KZF4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.84□□□□□ -0.032e-6■□□□□ 10
SND1Q7KZF4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.66□□□□□ -0.062e-6■□□□□ 10
SND1Q7KZF4 FAM234A-215ENST00000468354 462 ntTSL 314.29□□□□□ -0.122e-6■□□□□ 10
SND1Q7KZF4 LTBR-208ENST00000541005 583 ntTSL 213.55□□□□□ -0.242e-6■□□□□ 10
SND1Q7KZF4 LTBR-203ENST00000441074 2327 ntTSL 1 (best)13.28□□□□□ -0.282e-6■□□□□ 10
SND1Q7KZF4 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.332e-6■□□□□ 10
SND1Q7KZF4 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.332e-6■□□□□ 10
SND1Q7KZF4 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC12.55□□□□□ -0.42e-6■□□□□ 10
SND1Q7KZF4 SLC35F5-211ENST00000485214 577 ntTSL 311.7□□□□□ -0.542e-6■□□□□ 10
SND1Q7KZF4 PRIM1-206ENST00000550770 1008 ntTSL 511.47□□□□□ -0.572e-6■□□□□ 10
SND1Q7KZF4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC10.64□□□□□ -0.712e-6■□□□□ 10
SND1Q7KZF4 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.741e-10■□□□□ 10
SND1Q7KZF4 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC9.84□□□□□ -0.832e-6■□□□□ 10
SND1Q7KZF4 SLC35F5-209ENST00000469702 784 ntTSL 39.21□□□□□ -0.942e-6■□□□□ 10
SND1Q7KZF4 ELOVL6-204ENST00000506461 575 ntTSL 48.99□□□□□ -0.972e-6■□□□□ 10
SND1Q7KZF4 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.991e-10■□□□□ 10
SND1Q7KZF4 SLC35F5-205ENST00000447673 725 ntTSL 38.71□□□□□ -1.022e-6■□□□□ 10
SND1Q7KZF4 PRIM1-208ENST00000552590 1459 ntTSL 58.62□□□□□ -1.032e-6■□□□□ 10
SND1Q7KZF4 SAR1A-207ENST00000452767 672 ntTSL 58.54□□□□□ -1.041e-10■□□□□ 10
SND1Q7KZF4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.081e-10■□□□□ 10
SND1Q7KZF4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.122e-6■□□□□ 10
SND1Q7KZF4 ORMDL2-202ENST00000546645 897 ntTSL 27.98□□□□□ -1.132e-6■□□□□ 10
SND1Q7KZF4 MLEC-204ENST00000535656 543 ntTSL 37.92□□□□□ -1.143e-7■□□□□ 10
SND1Q7KZF4 MLEC-205ENST00000545525 549 ntTSL 27.92□□□□□ -1.143e-7■□□□□ 10
SND1Q7KZF4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.74□□□□□ -1.171e-10■□□□□ 10
SND1Q7KZF4 SLC35F5-210ENST00000470204 523 ntTSL 57.46□□□□□ -1.222e-6■□□□□ 10
SND1Q7KZF4 DARS-202ENST00000422708 623 ntTSL 26.9□□□□□ -1.32e-6■□□□□ 10
SND1Q7KZF4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.71□□□□□ -1.342e-6■□□□□ 10
SND1Q7KZF4 SLC35F5-206ENST00000459683 744 ntTSL 26.66□□□□□ -1.342e-6■□□□□ 10
SND1Q7KZF4 RNF121-205ENST00000525176 328 ntTSL 36.53□□□□□ -1.362e-6■□□□□ 10
SND1Q7KZF4 PSMA7-206ENST00000486193 548 ntTSL 26.48□□□□□ -1.372e-6■□□□□ 10
SND1Q7KZF4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.36□□□□□ -1.392e-6■□□□□ 10
SND1Q7KZF4 ELOVL6-203ENST00000503885 458 ntTSL 45.32□□□□□ -1.562e-6■□□□□ 10
SND1Q7KZF4 SF3B1-203ENST00000414174 593 ntTSL 44.72□□□□□ -1.652e-6■□□□□ 10
SND1Q7KZF4 TM9SF4-206ENST00000479591 566 ntTSL 212.46□□□□□ -0.412e-14■□□□□ 10
SND1Q7KZF4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.98■■■□□ 2.395e-8■□□□□ 10
SND1Q7KZF4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.88■■■□□ 2.375e-8■□□□□ 10
SND1Q7KZF4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.16■■■□□ 2.265e-8■□□□□ 10
SND1Q7KZF4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.073e-12■□□□□ 10
SND1Q7KZF4 EIF2AK1-203ENST00000431744 806 ntTSL 327.07■■□□□ 1.922e-6■□□□□ 10
SND1Q7KZF4 EIF2AK1-204ENST00000446699 573 ntTSL 427.07■■□□□ 1.922e-6■□□□□ 10
SND1Q7KZF4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.11■■□□□ 1.615e-8■□□□□ 10
SND1Q7KZF4 EIF2AK1-205ENST00000461493 631 ntTSL 221.07■□□□□ 0.962e-6■□□□□ 10
SND1Q7KZF4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.533e-12■□□□□ 10
SND1Q7KZF4 EIF2AK1-206ENST00000463213 791 ntTSL 216.78■□□□□ 0.282e-6■□□□□ 10
SND1Q7KZF4 LTBP4-226ENST00000599724 910 ntTSL 516.35■□□□□ 0.213e-6■□□□□ 10
SND1Q7KZF4 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.12e-6■□□□□ 10
SND1Q7KZF4 SLC2A3-208ENST00000541671 590 ntTSL 212.5□□□□□ -0.415e-8■□□□□ 10
SND1Q7KZF4 SEC61G-205ENST00000460484 1227 ntTSL 1 (best)11.7□□□□□ -0.543e-12■□□□□ 10
SND1Q7KZF4 SEC61G-207ENST00000480303 661 ntTSL 1 (best)9.15□□□□□ -0.943e-12■□□□□ 10
SND1Q7KZF4 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.13e-12■□□□□ 10
SND1Q7KZF4 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.173e-12■□□□□ 10
SND1Q7KZF4 SEC61G-206ENST00000461536 437 ntTSL 25.79□□□□□ -1.483e-12■□□□□ 10
SND1Q7KZF4 ANTXR2-209ENST00000514959 579 ntTSL 24.08□□□□□ -1.762e-6■□□□□ 10
SND1Q7KZF4 SLC16A3-203ENST00000577650 545 ntTSL 317.65■□□□□ 0.425e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-216ENST00000580888 710 ntTSL 218.58■□□□□ 0.565e-9■□□□□ 10
SND1Q7KZF4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.95■□□□□ 0.467e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-208ENST00000578476 573 ntTSL 217.29■□□□□ 0.365e-9■□□□□ 10
SND1Q7KZF4 EIF4A1-207ENST00000578324 1577 ntTSL 517.1■□□□□ 0.337e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.227e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-228ENST00000583389 951 ntTSL 315.17■□□□□ 0.027e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-235ENST00000584860 1109 ntTSL 314.15□□□□□ -0.147e-13■□□□□ 10
SND1Q7KZF4 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.497e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-236ENST00000584901 1021 ntTSL 211.93□□□□□ -0.57e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-226ENST00000582848 591 ntTSL 311.87□□□□□ -0.515e-9■□□□□ 10
SND1Q7KZF4 EIF4A1-218ENST00000581544 1444 ntTSL 211.84□□□□□ -0.517e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC11.56□□□□□ -0.567e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-229ENST00000583802 563 ntTSL 411.18□□□□□ -0.625e-9■□□□□ 10
SND1Q7KZF4 EIF4A1-223ENST00000582169 552 ntTSL 411.18□□□□□ -0.625e-9■□□□□ 10
SND1Q7KZF4 EIF4A1-217ENST00000581384 642 ntTSL 510.43□□□□□ -0.745e-9■□□□□ 10
SND1Q7KZF4 EIF4A1-233ENST00000584784 818 ntTSL 510.14□□□□□ -0.797e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-209ENST00000578495 916 ntTSL 59.66□□□□□ -0.867e-13■□□□□ 10
SND1Q7KZF4 ACTB-208ENST00000464611 715 ntTSL 59.26□□□□□ -0.935e-17■□□□□ 10
SND1Q7KZF4 EIF4A1-237ENST00000585024 577 ntTSL 48.85□□□□□ -0.995e-9■□□□□ 10
SND1Q7KZF4 EIF4A1-202ENST00000396527 1169 ntTSL 28.35□□□□□ -1.077e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-230ENST00000583899 665 ntTSL 36.37□□□□□ -1.395e-9■□□□□ 10
SND1Q7KZF4 EIF4A1-211ENST00000578754 547 ntTSL 45.61□□□□□ -1.517e-13■□□□□ 10
SND1Q7KZF4 EIF4A1-204ENST00000577731 574 ntTSL 23.83□□□□□ -1.87e-13■□□□□ 10
SND1Q7KZF4 RELN-206ENST00000473945 688 ntTSL 39.21□□□□□ -0.941e-34■□□□□ 10
SND1Q7KZF4 HNRNPK-211ENST00000493362 868 ntTSL 29.72□□□□□ -0.853e-10■□□□□ 10
SND1Q7KZF4 HNRNPK-208ENST00000481820 957 ntTSL 29.52□□□□□ -0.893e-10■□□□□ 10
SND1Q7KZF4 HNRNPK-210ENST00000492865 528 ntTSL 28.37□□□□□ -1.073e-10■□□□□ 10
SND1Q7KZF4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.357e-8■□□□□ 10
SND1Q7KZF4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.17e-8■□□□□ 10
SND1Q7KZF4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.62■□□□□ 0.097e-8■□□□□ 10
SND1Q7KZF4 ATG9A-203ENST00000409033 3701 ntTSL 1 (best)13.67□□□□□ -0.227e-8■□□□□ 10
SND1Q7KZF4 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.457e-8■□□□□ 10
SND1Q7KZF4 SELENOP-211ENST00000513303 714 ntTSL 213.22□□□□□ -0.299e-30■□□□□ 10
Retrieved 100 of 13,567 protein–RNA pairs in 63.1 ms