RNA–Protein interactions for RNA: ENST00000584860.5

EIF4A1-235, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-235ENST00000584860 NISCHQ9Y2I1 1504 aa33.42■■■□□ 2.94
EIF4A1-235ENST00000584860 ABCC9O60706 1549 aa29.87■■■□□ 2.37
EIF4A1-235ENST00000584860 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
EIF4A1-235ENST00000584860 DNAJC5BQ9UF47 199 aa28.72■■■□□ 2.19
EIF4A1-235ENST00000584860 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
EIF4A1-235ENST00000584860 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
EIF4A1-235ENST00000584860 NACADO15069 1562 aa27.89■■■□□ 2.05
EIF4A1-235ENST00000584860 ZCCHC6Q5VYS8 1495 aaKnown RBP27.85■■■□□ 2.05
EIF4A1-235ENST00000584860 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
EIF4A1-235ENST00000584860 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
EIF4A1-235ENST00000584860 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
EIF4A1-235ENST00000584860 UNC13AQ9UPW8 1703 aa27.57■■■□□ 2
EIF4A1-235ENST00000584860 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.98
EIF4A1-235ENST00000584860 SCRIBQ14160 1630 aa27.19■■□□□ 1.94
EIF4A1-235ENST00000584860 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
EIF4A1-235ENST00000584860 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
EIF4A1-235ENST00000584860 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
EIF4A1-235ENST00000584860 DNAJC5Q9H3Z4 198 aa26.88■■□□□ 1.89
EIF4A1-235ENST00000584860 EIF4G1Q04637 1599 aaKnown RBP26.74■■□□□ 1.87
EIF4A1-235ENST00000584860 CUX2O14529 1486 aa26.06■■□□□ 1.76
EIF4A1-235ENST00000584860 SMARCA4P51532 1647 aa25.97■■□□□ 1.75
EIF4A1-235ENST00000584860 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
EIF4A1-235ENST00000584860 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
EIF4A1-235ENST00000584860 MROH2BQ7Z745 1585 aa25.8■■□□□ 1.72
EIF4A1-235ENST00000584860 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
EIF4A1-235ENST00000584860 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
EIF4A1-235ENST00000584860 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
EIF4A1-235ENST00000584860 PEG3Q9GZU2 1588 aa25.66■■□□□ 1.7
EIF4A1-235ENST00000584860 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
EIF4A1-235ENST00000584860 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
EIF4A1-235ENST00000584860 WIZO95785 1651 aa25.57■■□□□ 1.68
EIF4A1-235ENST00000584860 NESP48681 1621 aa25.48■■□□□ 1.67
EIF4A1-235ENST00000584860 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
EIF4A1-235ENST00000584860 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.66
EIF4A1-235ENST00000584860 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
EIF4A1-235ENST00000584860 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
EIF4A1-235ENST00000584860 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
EIF4A1-235ENST00000584860 KIF21AQ7Z4S6 1674 aa25.15■■□□□ 1.62
EIF4A1-235ENST00000584860 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
EIF4A1-235ENST00000584860 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
EIF4A1-235ENST00000584860 CCDC88BA6NC98 1476 aa24.92■■□□□ 1.58
EIF4A1-235ENST00000584860 MRC2Q9UBG0 1479 aa24.88■■□□□ 1.57
EIF4A1-235ENST00000584860 WDR62O43379 1518 aa24.86■■□□□ 1.57
EIF4A1-235ENST00000584860 CFTRP13569 1480 aa24.84■■□□□ 1.57
EIF4A1-235ENST00000584860 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
EIF4A1-235ENST00000584860 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
EIF4A1-235ENST00000584860 FANCD2Q9BXW9 1451 aa24.73■■□□□ 1.55
EIF4A1-235ENST00000584860 OSCARQ8IYS5 282 aa24.72■■□□□ 1.55
EIF4A1-235ENST00000584860 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
EIF4A1-235ENST00000584860 RIMBP3CA6NJZ7 1639 aa24.53■■□□□ 1.52
EIF4A1-235ENST00000584860 RIMBP3BA6NNM3 1639 aa24.53■■□□□ 1.52
EIF4A1-235ENST00000584860 RIMBP3Q9UFD9 1639 aa24.53■■□□□ 1.52
EIF4A1-235ENST00000584860 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
EIF4A1-235ENST00000584860 ARHGEF11O15085 1522 aa24.36■■□□□ 1.49
EIF4A1-235ENST00000584860 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
EIF4A1-235ENST00000584860 DNMBPQ6XZF7 1577 aa24.33■■□□□ 1.48
EIF4A1-235ENST00000584860 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
EIF4A1-235ENST00000584860 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
EIF4A1-235ENST00000584860 CUX1P39880 1505 aa24.2■■□□□ 1.47
EIF4A1-235ENST00000584860 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
EIF4A1-235ENST00000584860 IFT140Q96RY7 1462 aa24.16■■□□□ 1.46
EIF4A1-235ENST00000584860 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
EIF4A1-235ENST00000584860 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
EIF4A1-235ENST00000584860 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
EIF4A1-235ENST00000584860 FGD5Q6ZNL6 1462 aa24.1■■□□□ 1.45
EIF4A1-235ENST00000584860 ARAP1Q96P48 1450 aa24.08■■□□□ 1.45
EIF4A1-235ENST00000584860 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
EIF4A1-235ENST00000584860 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
EIF4A1-235ENST00000584860 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
EIF4A1-235ENST00000584860 CHD1O14646 1710 aa24.02■■□□□ 1.44
EIF4A1-235ENST00000584860 SOGA1O94964 1423 aa24.01■■□□□ 1.43
EIF4A1-235ENST00000584860 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
EIF4A1-235ENST00000584860 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.434e-6■■■■□ 21.4
EIF4A1-235ENST00000584860 WDR97A6NE52 1622 aa23.97■■□□□ 1.43
EIF4A1-235ENST00000584860 TOP2BQ02880 1626 aa23.97■■□□□ 1.43
EIF4A1-235ENST00000584860 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.433e-7■■■■□ 20.9
EIF4A1-235ENST00000584860 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
EIF4A1-235ENST00000584860 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
EIF4A1-235ENST00000584860 FBLN2P98095 1184 aa23.82■■□□□ 1.4
EIF4A1-235ENST00000584860 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
EIF4A1-235ENST00000584860 PBRM1Q86U86 1689 aa23.8■■□□□ 1.4
EIF4A1-235ENST00000584860 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
EIF4A1-235ENST00000584860 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
EIF4A1-235ENST00000584860 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
EIF4A1-235ENST00000584860 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
EIF4A1-235ENST00000584860 GRIN2BQ13224 1484 aa23.72■■□□□ 1.39
EIF4A1-235ENST00000584860 MAGI1Q96QZ7 1491 aaPredicted RBP23.65■■□□□ 1.38
EIF4A1-235ENST00000584860 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
EIF4A1-235ENST00000584860 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
EIF4A1-235ENST00000584860 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
EIF4A1-235ENST00000584860 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
EIF4A1-235ENST00000584860 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
EIF4A1-235ENST00000584860 KIF27Q86VH2 1401 aa23.45■■□□□ 1.34
EIF4A1-235ENST00000584860 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
EIF4A1-235ENST00000584860 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
EIF4A1-235ENST00000584860 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
EIF4A1-235ENST00000584860 IGF1RP08069 1367 aa23.37■■□□□ 1.33
EIF4A1-235ENST00000584860 CUL7Q14999 1698 aa23.36■■□□□ 1.33
EIF4A1-235ENST00000584860 NUP160Q12769 1436 aa23.33■■□□□ 1.32
EIF4A1-235ENST00000584860 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms