Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PACRGL-222ENST00000509625 543 ntTSL 419.01■□□□□ 0.636e-6■■□□□ 11.7
NCBP2P52298 PACRGL-225ENST00000511089 647 ntTSL 519.01■□□□□ 0.636e-6■■□□□ 11.7
NCBP2P52298 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.616e-6■■□□□ 11.7
NCBP2P52298 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.67■□□□□ 0.586e-6■■□□□ 11.7
NCBP2P52298 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.67■□□□□ 0.586e-6■■□□□ 11.7
NCBP2P52298 PACRGL-229ENST00000513861 564 ntTSL 418.67■□□□□ 0.586e-6■■□□□ 11.7
NCBP2P52298 PACRGL-224ENST00000510700 625 ntTSL 318.65■□□□□ 0.586e-6■■□□□ 11.7
NCBP2P52298 PACRGL-226ENST00000511160 556 ntTSL 418.65■□□□□ 0.586e-6■■□□□ 11.7
NCBP2P52298 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.526e-6■■□□□ 11.7
NCBP2P52298 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.56e-6■■□□□ 11.7
NCBP2P52298 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.496e-6■■□□□ 11.7
NCBP2P52298 HPS4-211ENST00000479064 697 ntTSL 318.04■□□□□ 0.486e-6■■□□□ 11.7
NCBP2P52298 HPS4-213ENST00000483631 737 ntTSL 318.04■□□□□ 0.486e-6■■□□□ 11.7
NCBP2P52298 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.456e-6■■□□□ 11.7
NCBP2P52298 PSD3-216ENST00000521841 487 ntTSL 417.69■□□□□ 0.426e-6■■□□□ 11.7
NCBP2P52298 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.63■□□□□ 0.416e-6■■□□□ 11.7
NCBP2P52298 PACRGL-223ENST00000510051 981 ntTSL 1 (best)17.63■□□□□ 0.416e-6■■□□□ 11.7
NCBP2P52298 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.416e-6■■□□□ 11.7
NCBP2P52298 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.396e-6■■□□□ 11.7
NCBP2P52298 WDR62-202ENST00000378860 1980 ntTSL 217.48■□□□□ 0.396e-6■■□□□ 11.7
NCBP2P52298 CCDC183-208ENST00000609471 644 ntTSL 217.29■□□□□ 0.366e-6■■□□□ 11.7
NCBP2P52298 PACRGL-209ENST00000503747 848 ntTSL 517.03■□□□□ 0.326e-6■■□□□ 11.7
NCBP2P52298 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.96■□□□□ 0.316e-6■■□□□ 11.7
NCBP2P52298 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.296e-6■■□□□ 11.7
NCBP2P52298 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.69■□□□□ 0.266e-6■■□□□ 11.7
NCBP2P52298 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.55■□□□□ 0.246e-6■■□□□ 11.7
NCBP2P52298 PACRGL-219ENST00000508753 497 ntTSL 316.55■□□□□ 0.246e-6■■□□□ 11.7
NCBP2P52298 PACRGL-230ENST00000514292 580 ntTSL 416.55■□□□□ 0.246e-6■■□□□ 11.7
NCBP2P52298 PACRGL-211ENST00000505160 577 ntTSL 416.4■□□□□ 0.226e-6■■□□□ 11.7
NCBP2P52298 WDR62-204ENST00000427823 955 ntTSL 516.13■□□□□ 0.176e-6■■□□□ 11.7
NCBP2P52298 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.1■□□□□ 0.176e-6■■□□□ 11.7
NCBP2P52298 TMEM141-203ENST00000479737 491 ntTSL 215.83■□□□□ 0.126e-6■■□□□ 11.7
NCBP2P52298 VPS9D1-203ENST00000563798 459 ntTSL 315.6■□□□□ 0.096e-6■■□□□ 11.7
NCBP2P52298 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.48■□□□□ 0.076e-6■■□□□ 11.7
NCBP2P52298 WDR62-205ENST00000587391 5971 ntTSL 1 (best)15.17■□□□□ 0.026e-6■■□□□ 11.7
NCBP2P52298 PACRGL-215ENST00000506702 1233 ntTSL 515.16■□□□□ 0.026e-6■■□□□ 11.7
NCBP2P52298 CHD7-204ENST00000526846 500 ntTSL 214.78□□□□□ -0.046e-6■■□□□ 11.7
NCBP2P52298 GDAP1-205ENST00000522568 1324 ntTSL 214.49□□□□□ -0.096e-6■■□□□ 11.7
NCBP2P52298 ALDOA-223ENST00000567555 554 ntTSL 1 (best)14.45□□□□□ -0.16e-6■■□□□ 11.7
NCBP2P52298 HPS4-210ENST00000473782 575 ntTSL 214.13□□□□□ -0.156e-6■■□□□ 11.7
NCBP2P52298 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.196e-6■■□□□ 11.7
NCBP2P52298 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.84□□□□□ -0.199e-11■■□□□ 11.7
NCBP2P52298 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.26e-6■■□□□ 11.7
NCBP2P52298 PACRGL-210ENST00000504630 620 ntTSL 313.77□□□□□ -0.216e-6■■□□□ 11.7
NCBP2P52298 PACRGL-228ENST00000513590 915 ntTSL 513.77□□□□□ -0.216e-6■■□□□ 11.7
NCBP2P52298 FAM102A-207ENST00000494606 536 ntTSL 313.62□□□□□ -0.236e-6■■□□□ 11.7
NCBP2P52298 WDHD1-203ENST00000455555 768 ntTSL 213.6□□□□□ -0.236e-6■■□□□ 11.7
NCBP2P52298 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.249e-11■■□□□ 11.7
NCBP2P52298 TMEM141-202ENST00000465017 839 ntTSL 213.52□□□□□ -0.256e-6■■□□□ 11.7
NCBP2P52298 TMEM141-204ENST00000483187 683 ntTSL 213.52□□□□□ -0.256e-6■■□□□ 11.7
NCBP2P52298 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.276e-6■■□□□ 11.7
NCBP2P52298 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.279e-11■■□□□ 11.7
NCBP2P52298 GDAP1-206ENST00000523640 257 ntTSL 313.32□□□□□ -0.286e-6■■□□□ 11.7
NCBP2P52298 ALDOA-208ENST00000562679 906 ntTSL 513.3□□□□□ -0.286e-6■■□□□ 11.7
NCBP2P52298 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.326e-6■■□□□ 11.7
NCBP2P52298 PPME1-207ENST00000542710 590 ntTSL 313.04□□□□□ -0.326e-6■■□□□ 11.7
NCBP2P52298 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.9□□□□□ -0.346e-6■■□□□ 11.7
NCBP2P52298 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.356e-6■■□□□ 11.7
NCBP2P52298 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.78□□□□□ -0.366e-6■■□□□ 11.7
NCBP2P52298 BAIAP2-207ENST00000571530 581 ntTSL 412.76□□□□□ -0.376e-6■■□□□ 11.7
NCBP2P52298 ALDOA-216ENST00000566012 553 ntTSL 512.67□□□□□ -0.386e-6■■□□□ 11.7
NCBP2P52298 GDAP1-208ENST00000524366 583 ntTSL 312.64□□□□□ -0.396e-6■■□□□ 11.7
NCBP2P52298 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.42□□□□□ -0.426e-6■■□□□ 11.7
NCBP2P52298 PCK1-204ENST00000475833 1037 ntTSL 212.31□□□□□ -0.446e-6■■□□□ 11.7
NCBP2P52298 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.456e-6■■□□□ 11.7
NCBP2P52298 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.476e-6■■□□□ 11.7
NCBP2P52298 WDR62-207ENST00000608676 2960 ntTSL 212.02□□□□□ -0.496e-6■■□□□ 11.7
NCBP2P52298 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC11.93□□□□□ -0.56e-6■■□□□ 11.7
NCBP2P52298 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.56e-6■■□□□ 11.7
NCBP2P52298 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.546e-6■■□□□ 11.7
NCBP2P52298 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC11.58□□□□□ -0.559e-11■■□□□ 11.7
NCBP2P52298 FAM102A-206ENST00000493175 423 ntTSL 311.47□□□□□ -0.576e-6■■□□□ 11.7
NCBP2P52298 WDR62-201ENST00000270301 4632 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.586e-6■■□□□ 11.7
NCBP2P52298 TMEM141-206ENST00000489739 551 ntTSL 311.39□□□□□ -0.596e-6■■□□□ 11.7
NCBP2P52298 TTC39B-205ENST00000506891 900 ntTSL 1 (best)11.12□□□□□ -0.636e-6■■□□□ 11.7
NCBP2P52298 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.636e-6■■□□□ 11.7
NCBP2P52298 ALDOA-220ENST00000566846 512 ntTSL 210.97□□□□□ -0.656e-6■■□□□ 11.7
NCBP2P52298 GDAP1-204ENST00000521096 806 ntTSL 310.9□□□□□ -0.666e-6■■□□□ 11.7
NCBP2P52298 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.686e-6■■□□□ 11.7
NCBP2P52298 STRIP1-205ENST00000485775 3363 ntTSL 1 (best)10.71□□□□□ -0.696e-6■■□□□ 11.7
NCBP2P52298 GOLGA8B-203ENST00000484716 6114 ntTSL 1 (best)10.7□□□□□ -0.76e-6■■□□□ 11.7
NCBP2P52298 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.76e-6■■□□□ 11.7
NCBP2P52298 PABPC1L-211ENST00000476056 1214 ntTSL 510.67□□□□□ -0.79e-11■■□□□ 11.7
NCBP2P52298 HPS4-202ENST00000398145 4497 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.76e-6■■□□□ 11.7
NCBP2P52298 PPME1-202ENST00000398427 2496 ntTSL 1 (best) BASIC10.66□□□□□ -0.76e-6■■□□□ 11.7
NCBP2P52298 SAP30L-AS1-201ENST00000501280 568 ntTSL 510.53□□□□□ -0.726e-6■■□□□ 11.7
NCBP2P52298 PCK1-202ENST00000467047 5074 ntTSL 1 (best)10.37□□□□□ -0.756e-6■■□□□ 11.7
NCBP2P52298 PCK1-201ENST00000319441 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.786e-6■■□□□ 11.7
NCBP2P52298 PKP4-206ENST00000452162 2359 ntTSL 1 (best)10.07□□□□□ -0.86e-6■■□□□ 11.7
NCBP2P52298 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.86e-6■■□□□ 11.7
NCBP2P52298 GDAP1-201ENST00000220822 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.836e-6■■□□□ 11.7
NCBP2P52298 ALDOA-210ENST00000563987 586 ntTSL 29.77□□□□□ -0.856e-6■■□□□ 11.7
NCBP2P52298 SAP30L-AS1-203ENST00000522312 569 ntTSL 4 BASIC9.7□□□□□ -0.866e-6■■□□□ 11.7
NCBP2P52298 ASMTL-205ENST00000474865 851 ntTSL 29.65□□□□□ -0.866e-6■■□□□ 11.7
NCBP2P52298 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC9.42□□□□□ -0.96e-6■■□□□ 11.7
NCBP2P52298 PSD3-215ENST00000521475 627 ntTSL 29.36□□□□□ -0.916e-6■■□□□ 11.7
NCBP2P52298 PPME1-209ENST00000544401 488 ntTSL 49.31□□□□□ -0.926e-6■■□□□ 11.7
NCBP2P52298 HPS4-209ENST00000466781 6136 ntTSL 1 (best)8.57□□□□□ -1.046e-6■■□□□ 11.7
NCBP2P52298 HPS4-204ENST00000422379 1942 ntTSL 58.39□□□□□ -1.076e-6■■□□□ 11.7
NCBP2P52298 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.076e-6■■□□□ 11.7
Retrieved 100 of 18,329 protein–RNA pairs in 203.7 ms