RNA–Protein interactions for RNA: ENST00000360916.9

PACRGL-202, Transcript of parkin coregulated like, humanhuman

TSL 1 (best) BASIC

Gene PACRGL, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-202ENST00000360916 NISCHQ9Y2I1 1504 aa37.56■■■■□ 3.6
PACRGL-202ENST00000360916 CCDC180Q9P1Z9 1646 aa32.48■■■□□ 2.79
PACRGL-202ENST00000360916 ZCCHC6Q5VYS8 1495 aaKnown RBP31.63■■■□□ 2.65
PACRGL-202ENST00000360916 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
PACRGL-202ENST00000360916 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
PACRGL-202ENST00000360916 DCAF1Q9Y4B6 1507 aa30.96■■■□□ 2.55
PACRGL-202ENST00000360916 ABCC9O60706 1549 aa30.68■■■□□ 2.5
PACRGL-202ENST00000360916 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
PACRGL-202ENST00000360916 NACADO15069 1562 aa30.17■■■□□ 2.42
PACRGL-202ENST00000360916 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
PACRGL-202ENST00000360916 SCRIBQ14160 1630 aa30.08■■■□□ 2.41
PACRGL-202ENST00000360916 RB1CC1Q8TDY2 1594 aa29.84■■■□□ 2.37
PACRGL-202ENST00000360916 RSF1Q96T23 1441 aaPredicted RBP29.34■■■□□ 2.29
PACRGL-202ENST00000360916 UNC13AQ9UPW8 1703 aa29.31■■■□□ 2.28
PACRGL-202ENST00000360916 CECR2Q9BXF3 1484 aa29.24■■■□□ 2.27
PACRGL-202ENST00000360916 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
PACRGL-202ENST00000360916 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
PACRGL-202ENST00000360916 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
PACRGL-202ENST00000360916 BAZ1AQ9NRL2 1556 aaPredicted RBP28.95■■■□□ 2.22
PACRGL-202ENST00000360916 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
PACRGL-202ENST00000360916 WIZO95785 1651 aa28.88■■■□□ 2.21
PACRGL-202ENST00000360916 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
PACRGL-202ENST00000360916 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
PACRGL-202ENST00000360916 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
PACRGL-202ENST00000360916 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
PACRGL-202ENST00000360916 CCDC88BA6NC98 1476 aa28.29■■■□□ 2.12
PACRGL-202ENST00000360916 ATAD2BQ9ULI0 1458 aa28.23■■■□□ 2.11
PACRGL-202ENST00000360916 EIF4G1Q04637 1599 aaKnown RBP28.22■■■□□ 2.11
PACRGL-202ENST00000360916 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
PACRGL-202ENST00000360916 BAZ1BQ9UIG0 1483 aaKnown RBP28.1■■■□□ 2.09
PACRGL-202ENST00000360916 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
PACRGL-202ENST00000360916 ABCC8Q09428 1581 aa27.89■■■□□ 2.06
PACRGL-202ENST00000360916 NCAPD3P42695 1498 aa27.87■■■□□ 2.05
PACRGL-202ENST00000360916 HMGXB3Q12766 1538 aa27.86■■■□□ 2.05
PACRGL-202ENST00000360916 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
PACRGL-202ENST00000360916 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
PACRGL-202ENST00000360916 WRNQ14191 1432 aaPredicted RBP eCLIP27.59■■■□□ 2.01
PACRGL-202ENST00000360916 DNAJC5BQ9UF47 199 aa27.56■■■□□ 2
PACRGL-202ENST00000360916 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
PACRGL-202ENST00000360916 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
PACRGL-202ENST00000360916 SOGA1O94964 1423 aa27.45■■□□□ 1.98
PACRGL-202ENST00000360916 CFTRP13569 1480 aa27.4■■□□□ 1.98
PACRGL-202ENST00000360916 RUSC2Q8N2Y8 1516 aa27.33■■□□□ 1.97
PACRGL-202ENST00000360916 EEA1Q15075 1411 aa27.33■■□□□ 1.97
PACRGL-202ENST00000360916 TOP2BQ02880 1626 aa27.29■■□□□ 1.96
PACRGL-202ENST00000360916 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
PACRGL-202ENST00000360916 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
PACRGL-202ENST00000360916 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
PACRGL-202ENST00000360916 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
PACRGL-202ENST00000360916 CUX1P39880 1505 aa27.17■■□□□ 1.94
PACRGL-202ENST00000360916 PCGF6Q9BYE7 350 aa27.11■■□□□ 1.93
PACRGL-202ENST00000360916 GOLGA3Q08378 1498 aa27.04■■□□□ 1.92
PACRGL-202ENST00000360916 TNIKQ9UKE5 1360 aa27.02■■□□□ 1.92
PACRGL-202ENST00000360916 KIF21BO75037 1637 aa26.99■■□□□ 1.91
PACRGL-202ENST00000360916 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
PACRGL-202ENST00000360916 UBTFP17480 764 aaKnown RBP26.97■■□□□ 1.91
PACRGL-202ENST00000360916 CEP162Q5TB80 1403 aa26.97■■□□□ 1.91
PACRGL-202ENST00000360916 FANCD2Q9BXW9 1451 aa26.95■■□□□ 1.9
PACRGL-202ENST00000360916 NESP48681 1621 aa26.95■■□□□ 1.9
PACRGL-202ENST00000360916 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
PACRGL-202ENST00000360916 LAMC3Q9Y6N6 1575 aa26.85■■□□□ 1.89
PACRGL-202ENST00000360916 RAPGEF2Q9Y4G8 1499 aa26.85■■□□□ 1.89
PACRGL-202ENST00000360916 KIF27Q86VH2 1401 aa26.84■■□□□ 1.89
PACRGL-202ENST00000360916 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
PACRGL-202ENST00000360916 PRXQ9BXM0 1461 aa26.76■■□□□ 1.88
PACRGL-202ENST00000360916 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
PACRGL-202ENST00000360916 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
PACRGL-202ENST00000360916 CUX2O14529 1486 aa26.72■■□□□ 1.87
PACRGL-202ENST00000360916 TOPBP1Q92547 1522 aa26.7■■□□□ 1.86
PACRGL-202ENST00000360916 PPARGC1BQ86YN6 1023 aaKnown RBP26.69■■□□□ 1.86
PACRGL-202ENST00000360916 CLIP1P30622 1438 aa26.65■■□□□ 1.86
PACRGL-202ENST00000360916 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
PACRGL-202ENST00000360916 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
PACRGL-202ENST00000360916 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
PACRGL-202ENST00000360916 HRCP23327 699 aa26.59■■□□□ 1.85
PACRGL-202ENST00000360916 IGF1RP08069 1367 aa26.59■■□□□ 1.85
PACRGL-202ENST00000360916 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
PACRGL-202ENST00000360916 KIF21AQ7Z4S6 1674 aa26.56■■□□□ 1.84
PACRGL-202ENST00000360916 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
PACRGL-202ENST00000360916 RANGAP1P46060 587 aaPredicted RBP26.53■■□□□ 1.84
PACRGL-202ENST00000360916 VPS8Q8N3P4 1428 aa26.46■■□□□ 1.83
PACRGL-202ENST00000360916 CARMIL1Q5VZK9 1371 aa26.45■■□□□ 1.83
PACRGL-202ENST00000360916 TTBK1Q5TCY1 1321 aaPredicted RBP26.41■■□□□ 1.82
PACRGL-202ENST00000360916 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
PACRGL-202ENST00000360916 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
PACRGL-202ENST00000360916 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
PACRGL-202ENST00000360916 ABCA5Q8WWZ7 1642 aa26.29■■□□□ 1.8
PACRGL-202ENST00000360916 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
PACRGL-202ENST00000360916 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
PACRGL-202ENST00000360916 CUL7Q14999 1698 aa26.28■■□□□ 1.8
PACRGL-202ENST00000360916 ARHGAP35Q9NRY4 1499 aa26.26■■□□□ 1.79
PACRGL-202ENST00000360916 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
PACRGL-202ENST00000360916 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
PACRGL-202ENST00000360916 APLP2Q06481 763 aa26.21■■□□□ 1.79
PACRGL-202ENST00000360916 WDR62O43379 1518 aa26.14■■□□□ 1.77
PACRGL-202ENST00000360916 THOC2Q8NI27 1593 aaKnown RBP26.08■■□□□ 1.77
PACRGL-202ENST00000360916 CTTNBP2Q8WZ74 1663 aa26.07■■□□□ 1.76
PACRGL-202ENST00000360916 AQRO60306 1485 aaKnown RBP eCLIP26.05■■□□□ 1.76
PACRGL-202ENST00000360916 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
PACRGL-202ENST00000360916 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms