RNA–Protein interactions for RNA: ENST00000544401.2

PPME1-209, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 4

Gene PPME1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-209ENST00000544401 NISCHQ9Y2I1 1504 aa25.5■■□□□ 1.67
PPME1-209ENST00000544401 ABCC9O60706 1549 aa23.01■■□□□ 1.27
PPME1-209ENST00000544401 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.25
PPME1-209ENST00000544401 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
PPME1-209ENST00000544401 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
PPME1-209ENST00000544401 NACADO15069 1562 aa21.71■■□□□ 1.07
PPME1-209ENST00000544401 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
PPME1-209ENST00000544401 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
PPME1-209ENST00000544401 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
PPME1-209ENST00000544401 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
PPME1-209ENST00000544401 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
PPME1-209ENST00000544401 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.97
PPME1-209ENST00000544401 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
PPME1-209ENST00000544401 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
PPME1-209ENST00000544401 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
PPME1-209ENST00000544401 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
PPME1-209ENST00000544401 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
PPME1-209ENST00000544401 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
PPME1-209ENST00000544401 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
PPME1-209ENST00000544401 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
PPME1-209ENST00000544401 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
PPME1-209ENST00000544401 ATAD2BQ9ULI0 1458 aa19.97■□□□□ 0.79
PPME1-209ENST00000544401 SMARCA2P51531 1590 aa19.94■□□□□ 0.78
PPME1-209ENST00000544401 CUX2O14529 1486 aa19.9■□□□□ 0.78
PPME1-209ENST00000544401 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
PPME1-209ENST00000544401 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
PPME1-209ENST00000544401 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
PPME1-209ENST00000544401 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
PPME1-209ENST00000544401 NESP48681 1621 aa19.68■□□□□ 0.74
PPME1-209ENST00000544401 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
PPME1-209ENST00000544401 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
PPME1-209ENST00000544401 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
PPME1-209ENST00000544401 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
PPME1-209ENST00000544401 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
PPME1-209ENST00000544401 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
PPME1-209ENST00000544401 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
PPME1-209ENST00000544401 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
PPME1-209ENST00000544401 WIZO95785 1651 aa19.31■□□□□ 0.68
PPME1-209ENST00000544401 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
PPME1-209ENST00000544401 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
PPME1-209ENST00000544401 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
PPME1-209ENST00000544401 WDR62O43379 1518 aa19.24■□□□□ 0.67
PPME1-209ENST00000544401 CFTRP13569 1480 aa19.2■□□□□ 0.66
PPME1-209ENST00000544401 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
PPME1-209ENST00000544401 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
PPME1-209ENST00000544401 OSCARQ8IYS5 282 aa19.11■□□□□ 0.65
PPME1-209ENST00000544401 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
PPME1-209ENST00000544401 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
PPME1-209ENST00000544401 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
PPME1-209ENST00000544401 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
PPME1-209ENST00000544401 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
PPME1-209ENST00000544401 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
PPME1-209ENST00000544401 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
PPME1-209ENST00000544401 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
PPME1-209ENST00000544401 FBLN2P98095 1184 aa18.73■□□□□ 0.59
PPME1-209ENST00000544401 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.58
PPME1-209ENST00000544401 SOGA1O94964 1423 aa18.65■□□□□ 0.58
PPME1-209ENST00000544401 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.58
PPME1-209ENST00000544401 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.57
PPME1-209ENST00000544401 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
PPME1-209ENST00000544401 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
PPME1-209ENST00000544401 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
PPME1-209ENST00000544401 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
PPME1-209ENST00000544401 ARHGEF11O15085 1522 aa18.61■□□□□ 0.57
PPME1-209ENST00000544401 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.57
PPME1-209ENST00000544401 CHMP7Q8WUX9 453 aaPredicted RBP18.58■□□□□ 0.56
PPME1-209ENST00000544401 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
PPME1-209ENST00000544401 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
PPME1-209ENST00000544401 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
PPME1-209ENST00000544401 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
PPME1-209ENST00000544401 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
PPME1-209ENST00000544401 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
PPME1-209ENST00000544401 SNAPC4Q5SXM2 1469 aa18.47■□□□□ 0.55
PPME1-209ENST00000544401 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
PPME1-209ENST00000544401 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.54
PPME1-209ENST00000544401 CHD1O14646 1710 aa18.45■□□□□ 0.54
PPME1-209ENST00000544401 CUX1P39880 1505 aa18.44■□□□□ 0.54
PPME1-209ENST00000544401 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
PPME1-209ENST00000544401 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
PPME1-209ENST00000544401 SYNJ2O15056 1496 aa18.39■□□□□ 0.53
PPME1-209ENST00000544401 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
PPME1-209ENST00000544401 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
PPME1-209ENST00000544401 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
PPME1-209ENST00000544401 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
PPME1-209ENST00000544401 ABCA5Q8WWZ7 1642 aa18.19■□□□□ 0.5
PPME1-209ENST00000544401 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
PPME1-209ENST00000544401 GRIN2AQ12879 1464 aa18.18■□□□□ 0.5
PPME1-209ENST00000544401 FHAD1B1AJZ9 1412 aa18.17■□□□□ 0.5
PPME1-209ENST00000544401 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
PPME1-209ENST00000544401 NUP160Q12769 1436 aa18.11■□□□□ 0.49
PPME1-209ENST00000544401 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
PPME1-209ENST00000544401 ADAMTS12P58397 1594 aa18.08■□□□□ 0.49
PPME1-209ENST00000544401 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.49
PPME1-209ENST00000544401 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
PPME1-209ENST00000544401 JPH4Q96JJ6 628 aa18.05■□□□□ 0.48
PPME1-209ENST00000544401 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
PPME1-209ENST00000544401 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
PPME1-209ENST00000544401 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
PPME1-209ENST00000544401 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
PPME1-209ENST00000544401 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms