RNA–Protein interactions for RNA: ENST00000504630.5

PACRGL-210, Transcript of parkin coregulated like, humanhuman

TSL 3

Gene PACRGL, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-210ENST00000504630 NISCHQ9Y2I1 1504 aa35.96■■■■□ 3.35
PACRGL-210ENST00000504630 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
PACRGL-210ENST00000504630 ABCC9O60706 1549 aa31.03■■■□□ 2.56
PACRGL-210ENST00000504630 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
PACRGL-210ENST00000504630 NACADO15069 1562 aa29.97■■■□□ 2.39
PACRGL-210ENST00000504630 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
PACRGL-210ENST00000504630 MYO15BQ96JP2 1530 aa29.87■■■□□ 2.37
PACRGL-210ENST00000504630 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
PACRGL-210ENST00000504630 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
PACRGL-210ENST00000504630 UNC13AQ9UPW8 1703 aa29.3■■■□□ 2.28
PACRGL-210ENST00000504630 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
PACRGL-210ENST00000504630 BICRAQ9NZM4 1560 aa29.06■■■□□ 2.24
PACRGL-210ENST00000504630 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
PACRGL-210ENST00000504630 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
PACRGL-210ENST00000504630 DNAJC5BQ9UF47 199 aa28.36■■■□□ 2.13
PACRGL-210ENST00000504630 EIF4G1Q04637 1599 aaKnown RBP28.27■■■□□ 2.12
PACRGL-210ENST00000504630 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
PACRGL-210ENST00000504630 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
PACRGL-210ENST00000504630 SMARCA4P51532 1647 aa27.87■■■□□ 2.05
PACRGL-210ENST00000504630 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
PACRGL-210ENST00000504630 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
PACRGL-210ENST00000504630 ATAD2BQ9ULI0 1458 aa27.68■■■□□ 2.02
PACRGL-210ENST00000504630 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
PACRGL-210ENST00000504630 SMARCA2P51531 1590 aa27.65■■■□□ 2.02
PACRGL-210ENST00000504630 PEG3Q9GZU2 1588 aa27.63■■■□□ 2.01
PACRGL-210ENST00000504630 HMGXB3Q12766 1538 aa27.53■■■□□ 2
PACRGL-210ENST00000504630 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
PACRGL-210ENST00000504630 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
PACRGL-210ENST00000504630 WIZO95785 1651 aa27.41■■□□□ 1.98
PACRGL-210ENST00000504630 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
PACRGL-210ENST00000504630 NESP48681 1621 aa26.9■■□□□ 1.9
PACRGL-210ENST00000504630 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
PACRGL-210ENST00000504630 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
PACRGL-210ENST00000504630 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
PACRGL-210ENST00000504630 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
PACRGL-210ENST00000504630 CFTRP13569 1480 aa26.72■■□□□ 1.87
PACRGL-210ENST00000504630 ERCC6Q03468 1493 aa26.71■■□□□ 1.87
PACRGL-210ENST00000504630 PDS5BQ9NTI5 1447 aa26.68■■□□□ 1.86
PACRGL-210ENST00000504630 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
PACRGL-210ENST00000504630 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
PACRGL-210ENST00000504630 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
PACRGL-210ENST00000504630 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
PACRGL-210ENST00000504630 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
PACRGL-210ENST00000504630 CUX2O14529 1486 aa26.42■■□□□ 1.82
PACRGL-210ENST00000504630 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
PACRGL-210ENST00000504630 WDR62O43379 1518 aa26.34■■□□□ 1.81
PACRGL-210ENST00000504630 URB2Q14146 1524 aaKnown RBP26.26■■□□□ 1.79
PACRGL-210ENST00000504630 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
PACRGL-210ENST00000504630 TOPBP1Q92547 1522 aa26.12■■□□□ 1.77
PACRGL-210ENST00000504630 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
PACRGL-210ENST00000504630 CUX1P39880 1505 aa25.98■■□□□ 1.75
PACRGL-210ENST00000504630 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
PACRGL-210ENST00000504630 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
PACRGL-210ENST00000504630 FGD5Q6ZNL6 1462 aa25.86■■□□□ 1.73
PACRGL-210ENST00000504630 WRNQ14191 1432 aaPredicted RBP eCLIP25.86■■□□□ 1.73
PACRGL-210ENST00000504630 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
PACRGL-210ENST00000504630 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
PACRGL-210ENST00000504630 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
PACRGL-210ENST00000504630 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
PACRGL-210ENST00000504630 SOGA1O94964 1423 aa25.79■■□□□ 1.72
PACRGL-210ENST00000504630 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
PACRGL-210ENST00000504630 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
PACRGL-210ENST00000504630 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
PACRGL-210ENST00000504630 WDR97A6NE52 1622 aa25.68■■□□□ 1.7
PACRGL-210ENST00000504630 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.7
PACRGL-210ENST00000504630 ABCA10Q8WWZ4 1543 aa25.63■■□□□ 1.69
PACRGL-210ENST00000504630 TDRD9Q8NDG6 1382 aaKnown RBP25.61■■□□□ 1.69
PACRGL-210ENST00000504630 ABCA5Q8WWZ7 1642 aa25.53■■□□□ 1.68
PACRGL-210ENST00000504630 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
PACRGL-210ENST00000504630 GRIN2BQ13224 1484 aa25.47■■□□□ 1.67
PACRGL-210ENST00000504630 PBRM1Q86U86 1689 aa25.45■■□□□ 1.67
PACRGL-210ENST00000504630 DNAJC5Q9H3Z4 198 aa25.42■■□□□ 1.66
PACRGL-210ENST00000504630 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
PACRGL-210ENST00000504630 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
PACRGL-210ENST00000504630 CHD1O14646 1710 aa25.34■■□□□ 1.65
PACRGL-210ENST00000504630 ERICH3Q5RHP9 1530 aa25.33■■□□□ 1.65
PACRGL-210ENST00000504630 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
PACRGL-210ENST00000504630 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
PACRGL-210ENST00000504630 KIF27Q86VH2 1401 aa25.3■■□□□ 1.64
PACRGL-210ENST00000504630 SYNJ2O15056 1496 aa25.3■■□□□ 1.64
PACRGL-210ENST00000504630 ADAMTS12P58397 1594 aa25.27■■□□□ 1.64
PACRGL-210ENST00000504630 FBLN2P98095 1184 aa25.25■■□□□ 1.63
PACRGL-210ENST00000504630 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
PACRGL-210ENST00000504630 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
PACRGL-210ENST00000504630 IGF1RP08069 1367 aa25.19■■□□□ 1.62
PACRGL-210ENST00000504630 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
PACRGL-210ENST00000504630 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
PACRGL-210ENST00000504630 RUSC2Q8N2Y8 1516 aa25.13■■□□□ 1.61
PACRGL-210ENST00000504630 CUL7Q14999 1698 aa25.13■■□□□ 1.61
PACRGL-210ENST00000504630 CLASP1Q7Z460 1538 aa25.09■■□□□ 1.61
PACRGL-210ENST00000504630 NUP160Q12769 1436 aa25.06■■□□□ 1.6
PACRGL-210ENST00000504630 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
PACRGL-210ENST00000504630 CEP170Q5SW79 1584 aa25.03■■□□□ 1.6
PACRGL-210ENST00000504630 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
PACRGL-210ENST00000504630 EEA1Q15075 1411 aa24.93■■□□□ 1.58
PACRGL-210ENST00000504630 RIMBP3CA6NJZ7 1639 aa24.93■■□□□ 1.58
PACRGL-210ENST00000504630 RIMBP3BA6NNM3 1639 aa24.93■■□□□ 1.58
PACRGL-210ENST00000504630 RIMBP3Q9UFD9 1639 aa24.93■■□□□ 1.58
PACRGL-210ENST00000504630 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
PACRGL-210ENST00000504630 PRXQ9BXM0 1461 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms