RNA–Protein interactions for RNA: ENST00000434412.2

GDAP1-202, Transcript of ganglioside induced differentiation associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene GDAP1, Length 1,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDAP1-202ENST00000434412 NISCHQ9Y2I1 1504 aa35.63■■■■□ 3.29
GDAP1-202ENST00000434412 ABCC9O60706 1549 aa32.56■■■□□ 2.8
GDAP1-202ENST00000434412 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
GDAP1-202ENST00000434412 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
GDAP1-202ENST00000434412 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
GDAP1-202ENST00000434412 NACADO15069 1562 aa30.41■■■□□ 2.46
GDAP1-202ENST00000434412 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
GDAP1-202ENST00000434412 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
GDAP1-202ENST00000434412 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
GDAP1-202ENST00000434412 BICRAQ9NZM4 1560 aa29.92■■■□□ 2.38
GDAP1-202ENST00000434412 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
GDAP1-202ENST00000434412 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
GDAP1-202ENST00000434412 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
GDAP1-202ENST00000434412 DCAF1Q9Y4B6 1507 aa29.32■■■□□ 2.28
GDAP1-202ENST00000434412 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
GDAP1-202ENST00000434412 SCRIBQ14160 1630 aa29.29■■■□□ 2.28
GDAP1-202ENST00000434412 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
GDAP1-202ENST00000434412 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
GDAP1-202ENST00000434412 DNAJC5Q9H3Z4 198 aa28.62■■■□□ 2.17
GDAP1-202ENST00000434412 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
GDAP1-202ENST00000434412 CUX2O14529 1486 aa28.09■■■□□ 2.09
GDAP1-202ENST00000434412 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
GDAP1-202ENST00000434412 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
GDAP1-202ENST00000434412 NESP48681 1621 aa27.89■■■□□ 2.06
GDAP1-202ENST00000434412 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
GDAP1-202ENST00000434412 SMARCA2P51531 1590 aa27.84■■■□□ 2.05
GDAP1-202ENST00000434412 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
GDAP1-202ENST00000434412 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
GDAP1-202ENST00000434412 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
GDAP1-202ENST00000434412 THOC2Q8NI27 1593 aaKnown RBP27.59■■■□□ 2.01
GDAP1-202ENST00000434412 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
GDAP1-202ENST00000434412 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
GDAP1-202ENST00000434412 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
GDAP1-202ENST00000434412 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
GDAP1-202ENST00000434412 PDS5BQ9NTI5 1447 aa27.37■■□□□ 1.97
GDAP1-202ENST00000434412 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
GDAP1-202ENST00000434412 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
GDAP1-202ENST00000434412 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
GDAP1-202ENST00000434412 WIZO95785 1651 aa27.17■■□□□ 1.94
GDAP1-202ENST00000434412 WDR62O43379 1518 aa27.11■■□□□ 1.93
GDAP1-202ENST00000434412 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
GDAP1-202ENST00000434412 FANCD2Q9BXW9 1451 aa26.96■■□□□ 1.91
GDAP1-202ENST00000434412 CFTRP13569 1480 aa26.86■■□□□ 1.89
GDAP1-202ENST00000434412 OSCARQ8IYS5 282 aa26.84■■□□□ 1.89
GDAP1-202ENST00000434412 RSF1Q96T23 1441 aaPredicted RBP26.79■■□□□ 1.88
GDAP1-202ENST00000434412 URB2Q14146 1524 aaKnown RBP26.79■■□□□ 1.88
GDAP1-202ENST00000434412 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
GDAP1-202ENST00000434412 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
GDAP1-202ENST00000434412 RIMBP3CA6NJZ7 1639 aa26.53■■□□□ 1.84
GDAP1-202ENST00000434412 RIMBP3BA6NNM3 1639 aa26.53■■□□□ 1.84
GDAP1-202ENST00000434412 RIMBP3Q9UFD9 1639 aa26.53■■□□□ 1.84
GDAP1-202ENST00000434412 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
GDAP1-202ENST00000434412 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
GDAP1-202ENST00000434412 IFT140Q96RY7 1462 aa26.46■■□□□ 1.83
GDAP1-202ENST00000434412 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
GDAP1-202ENST00000434412 ARHGEF11O15085 1522 aa26.39■■□□□ 1.81
GDAP1-202ENST00000434412 EIF4G3O43432 1585 aaKnown RBP26.31■■□□□ 1.8
GDAP1-202ENST00000434412 CYB5RLQ6IPT4 315 aa26.3■■□□□ 1.8
GDAP1-202ENST00000434412 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.8
GDAP1-202ENST00000434412 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
GDAP1-202ENST00000434412 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
GDAP1-202ENST00000434412 CHD1O14646 1710 aa26.21■■□□□ 1.79
GDAP1-202ENST00000434412 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
GDAP1-202ENST00000434412 FBLN2P98095 1184 aa26.19■■□□□ 1.78
GDAP1-202ENST00000434412 ARAP1Q96P48 1450 aa26.12■■□□□ 1.77
GDAP1-202ENST00000434412 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
GDAP1-202ENST00000434412 TRHP20396 242 aaPredicted RBP26.1■■□□□ 1.77
GDAP1-202ENST00000434412 RAD54L2Q9Y4B4 1467 aa26.1■■□□□ 1.77
GDAP1-202ENST00000434412 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
GDAP1-202ENST00000434412 SOGA1O94964 1423 aa26.01■■□□□ 1.75
GDAP1-202ENST00000434412 SNAPC4Q5SXM2 1469 aa25.93■■□□□ 1.74
GDAP1-202ENST00000434412 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
GDAP1-202ENST00000434412 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
GDAP1-202ENST00000434412 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
GDAP1-202ENST00000434412 CUX1P39880 1505 aa25.85■■□□□ 1.73
GDAP1-202ENST00000434412 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
GDAP1-202ENST00000434412 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
GDAP1-202ENST00000434412 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
GDAP1-202ENST00000434412 WDR97A6NE52 1622 aa25.77■■□□□ 1.72
GDAP1-202ENST00000434412 SYNJ2O15056 1496 aa25.74■■□□□ 1.71
GDAP1-202ENST00000434412 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
GDAP1-202ENST00000434412 PBRM1Q86U86 1689 aa25.66■■□□□ 1.7
GDAP1-202ENST00000434412 AEBP2Q6ZN18 517 aaPredicted RBP25.58■■□□□ 1.69
GDAP1-202ENST00000434412 ABCA10Q8WWZ4 1543 aa25.56■■□□□ 1.68
GDAP1-202ENST00000434412 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
GDAP1-202ENST00000434412 ERCC6L2Q5T890 1561 aa25.54■■□□□ 1.68
GDAP1-202ENST00000434412 GRIN2AQ12879 1464 aa25.46■■□□□ 1.67
GDAP1-202ENST00000434412 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
GDAP1-202ENST00000434412 CEP170Q5SW79 1584 aa25.42■■□□□ 1.66
GDAP1-202ENST00000434412 ADAMTS12P58397 1594 aa25.39■■□□□ 1.65
GDAP1-202ENST00000434412 NUP160Q12769 1436 aa25.38■■□□□ 1.65
GDAP1-202ENST00000434412 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
GDAP1-202ENST00000434412 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
GDAP1-202ENST00000434412 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
GDAP1-202ENST00000434412 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
GDAP1-202ENST00000434412 BIVM-ERCC5R4GMW8 1640 aa25.28■■□□□ 1.64
GDAP1-202ENST00000434412 PRG4Q92954 1404 aaPredicted RBP25.21■■□□□ 1.63
GDAP1-202ENST00000434412 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
GDAP1-202ENST00000434412 KIF13AQ9H1H9 1805 aa25.21■■□□□ 1.63
GDAP1-202ENST00000434412 JPH4Q96JJ6 628 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms