RNA–Protein interactions for RNA: ENST00000319441.5

PCK1-201, Transcript of phosphoenolpyruvate carboxykinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCK1, Length 4,341 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1-201ENST00000319441 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
PCK1-201ENST00000319441 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
PCK1-201ENST00000319441 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
PCK1-201ENST00000319441 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
PCK1-201ENST00000319441 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
PCK1-201ENST00000319441 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
PCK1-201ENST00000319441 PCGF6Q9BYE7 350 aa16.98■□□□□ 0.31
PCK1-201ENST00000319441 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
PCK1-201ENST00000319441 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
PCK1-201ENST00000319441 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
PCK1-201ENST00000319441 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
PCK1-201ENST00000319441 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
PCK1-201ENST00000319441 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
PCK1-201ENST00000319441 HRCP23327 699 aa16.34■□□□□ 0.21
PCK1-201ENST00000319441 APLP2Q06481 763 aa16.34■□□□□ 0.21
PCK1-201ENST00000319441 ABCC9O60706 1549 aa16.33■□□□□ 0.2
PCK1-201ENST00000319441 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
PCK1-201ENST00000319441 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
PCK1-201ENST00000319441 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
PCK1-201ENST00000319441 CCER1Q8TC90 406 aaPredicted RBP16.25■□□□□ 0.19
PCK1-201ENST00000319441 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
PCK1-201ENST00000319441 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCK1-201ENST00000319441 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
PCK1-201ENST00000319441 ATP1B4Q9UN42 357 aaPredicted RBP15.97■□□□□ 0.15
PCK1-201ENST00000319441 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
PCK1-201ENST00000319441 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
PCK1-201ENST00000319441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
PCK1-201ENST00000319441 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
PCK1-201ENST00000319441 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
PCK1-201ENST00000319441 CENPBP07199 599 aaPredicted RBP15.79■□□□□ 0.12
PCK1-201ENST00000319441 ITGAEP38570 1179 aa15.77■□□□□ 0.11
PCK1-201ENST00000319441 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
PCK1-201ENST00000319441 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
PCK1-201ENST00000319441 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
PCK1-201ENST00000319441 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
PCK1-201ENST00000319441 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
PCK1-201ENST00000319441 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
PCK1-201ENST00000319441 FAM50AQ14320 339 aaKnown RBP15.37■□□□□ 0.05
PCK1-201ENST00000319441 NACADO15069 1562 aa15.36■□□□□ 0.05
PCK1-201ENST00000319441 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
PCK1-201ENST00000319441 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
PCK1-201ENST00000319441 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
PCK1-201ENST00000319441 ZNF316A6NFI3 1004 aaPredicted RBP15.28■□□□□ 0.04
PCK1-201ENST00000319441 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
PCK1-201ENST00000319441 GTF3C3Q9Y5Q9 886 aa15.24■□□□□ 0.03
PCK1-201ENST00000319441 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.03
PCK1-201ENST00000319441 NEFLP07196 543 aa15.2■□□□□ 0.02
PCK1-201ENST00000319441 CEP162Q5TB80 1403 aa15.19■□□□□ 0.02
PCK1-201ENST00000319441 POLR3GLQ9BT43 218 aa15.18■□□□□ 0.02
PCK1-201ENST00000319441 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
PCK1-201ENST00000319441 ARID3CA6NKF2 412 aa15.16■□□□□ 0.02
PCK1-201ENST00000319441 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
PCK1-201ENST00000319441 SOGA1O94964 1423 aa15.14■□□□□ 0.01
PCK1-201ENST00000319441 ACIN1Q9UKV3 1341 aaKnown RBP15.14■□□□□ 0.01
PCK1-201ENST00000319441 CLIP1P30622 1438 aa15.13■□□□□ 0.01
PCK1-201ENST00000319441 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
PCK1-201ENST00000319441 ABCC8Q09428 1581 aa15.08■□□□□ 0.01
PCK1-201ENST00000319441 WIZO95785 1651 aa15.08■□□□□ 0.01
PCK1-201ENST00000319441 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
PCK1-201ENST00000319441 TNIKQ9UKE5 1360 aa15.06■□□□□ 0
PCK1-201ENST00000319441 GOLGA3Q08378 1498 aa15.06■□□□□ 0
PCK1-201ENST00000319441 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
PCK1-201ENST00000319441 EEA1Q15075 1411 aa15.04■□□□□ -0
PCK1-201ENST00000319441 FBLN2P98095 1184 aa15.03■□□□□ -0
PCK1-201ENST00000319441 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
PCK1-201ENST00000319441 BCANQ96GW7 911 aa14.98□□□□□ -0.01
PCK1-201ENST00000319441 MIER1Q8N108 512 aa14.96□□□□□ -0.01
PCK1-201ENST00000319441 ERICH6Q7L0X2 663 aa14.96□□□□□ -0.01
PCK1-201ENST00000319441 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
PCK1-201ENST00000319441 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
PCK1-201ENST00000319441 ZNF326Q5BKZ1 582 aaKnown RBP14.92□□□□□ -0.02
PCK1-201ENST00000319441 ANP32CO43423 234 aa14.89□□□□□ -0.03
PCK1-201ENST00000319441 DDX10Q13206 875 aaKnown RBP14.88□□□□□ -0.03
PCK1-201ENST00000319441 HIRIP3Q9BW71 556 aaPredicted RBP14.88□□□□□ -0.03
PCK1-201ENST00000319441 CHIC2Q9UKJ5 165 aa14.87□□□□□ -0.03
PCK1-201ENST00000319441 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
PCK1-201ENST00000319441 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
PCK1-201ENST00000319441 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
PCK1-201ENST00000319441 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
PCK1-201ENST00000319441 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
PCK1-201ENST00000319441 TONSLQ96HA7 1378 aa14.78□□□□□ -0.04
PCK1-201ENST00000319441 MTUS2Q5JR59 1369 aa14.77□□□□□ -0.04
PCK1-201ENST00000319441 SMARCA4P51532 1647 aa14.77□□□□□ -0.05
PCK1-201ENST00000319441 VPS8Q8N3P4 1428 aa14.74□□□□□ -0.05
PCK1-201ENST00000319441 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
PCK1-201ENST00000319441 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
PCK1-201ENST00000319441 CUX2O14529 1486 aa14.71□□□□□ -0.05
PCK1-201ENST00000319441 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
PCK1-201ENST00000319441 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
PCK1-201ENST00000319441 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
PCK1-201ENST00000319441 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
PCK1-201ENST00000319441 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
PCK1-201ENST00000319441 FKBP8Q14318 412 aa14.66□□□□□ -0.06
PCK1-201ENST00000319441 CCNB3Q8WWL7 1395 aa14.65□□□□□ -0.06
PCK1-201ENST00000319441 HNRNPUQ00839 825 aaKnown RBP eCLIP14.62□□□□□ -0.07
PCK1-201ENST00000319441 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
PCK1-201ENST00000319441 MYT1Q01538 1121 aa14.62□□□□□ -0.07
PCK1-201ENST00000319441 FAM9BQ8IZU0 186 aa14.59□□□□□ -0.07
PCK1-201ENST00000319441 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
PCK1-201ENST00000319441 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms