RNA–Protein interactions for RNA: ENST00000220822.11

GDAP1-201, Transcript of ganglioside induced differentiation associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDAP1, Length 3,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDAP1-201ENST00000220822 SUPT5HO00267 1087 aaKnown RBP17.93■□□□□ 0.46
GDAP1-201ENST00000220822 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
GDAP1-201ENST00000220822 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
GDAP1-201ENST00000220822 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
GDAP1-201ENST00000220822 NISCHQ9Y2I1 1504 aa17.61■□□□□ 0.41
GDAP1-201ENST00000220822 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
GDAP1-201ENST00000220822 HRCP23327 699 aa17.42■□□□□ 0.38
GDAP1-201ENST00000220822 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
GDAP1-201ENST00000220822 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
GDAP1-201ENST00000220822 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
GDAP1-201ENST00000220822 FAM9AQ8IZU1 332 aaPredicted RBP16.91■□□□□ 0.3
GDAP1-201ENST00000220822 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
GDAP1-201ENST00000220822 YTHDC1Q96MU7 727 aaKnown RBP16.83■□□□□ 0.29
GDAP1-201ENST00000220822 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
GDAP1-201ENST00000220822 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
GDAP1-201ENST00000220822 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
GDAP1-201ENST00000220822 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
GDAP1-201ENST00000220822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
GDAP1-201ENST00000220822 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.22
GDAP1-201ENST00000220822 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
GDAP1-201ENST00000220822 MYO15BQ96JP2 1530 aa16.42■□□□□ 0.22
GDAP1-201ENST00000220822 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
GDAP1-201ENST00000220822 ACIN1Q9UKV3 1341 aaKnown RBP16.28■□□□□ 0.2
GDAP1-201ENST00000220822 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
GDAP1-201ENST00000220822 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.18
GDAP1-201ENST00000220822 MYT1Q01538 1121 aa16.12■□□□□ 0.17
GDAP1-201ENST00000220822 TRIM41Q8WV44 630 aa16.09■□□□□ 0.17
GDAP1-201ENST00000220822 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
GDAP1-201ENST00000220822 BCANQ96GW7 911 aa16.05■□□□□ 0.16
GDAP1-201ENST00000220822 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
GDAP1-201ENST00000220822 MIER1Q8N108 512 aa15.76■□□□□ 0.11
GDAP1-201ENST00000220822 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
GDAP1-201ENST00000220822 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
GDAP1-201ENST00000220822 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
GDAP1-201ENST00000220822 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
GDAP1-201ENST00000220822 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
GDAP1-201ENST00000220822 ITGAEP38570 1179 aa15.58■□□□□ 0.09
GDAP1-201ENST00000220822 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.08
GDAP1-201ENST00000220822 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
GDAP1-201ENST00000220822 CNGB1Q14028 1251 aaPredicted RBP15.53■□□□□ 0.08
GDAP1-201ENST00000220822 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
GDAP1-201ENST00000220822 APLP2Q06481 763 aa15.42■□□□□ 0.06
GDAP1-201ENST00000220822 FKBP8Q14318 412 aa15.42■□□□□ 0.06
GDAP1-201ENST00000220822 NEFLP07196 543 aa15.39■□□□□ 0.05
GDAP1-201ENST00000220822 IRX6P78412 446 aaPredicted RBP15.38■□□□□ 0.05
GDAP1-201ENST00000220822 SUPT16HQ9Y5B9 1047 aaKnown RBP15.36■□□□□ 0.05
GDAP1-201ENST00000220822 HIRIP3Q9BW71 556 aaPredicted RBP15.33■□□□□ 0.04
GDAP1-201ENST00000220822 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
GDAP1-201ENST00000220822 TSHZ2Q9NRE2 1034 aa15.31■□□□□ 0.04
GDAP1-201ENST00000220822 NBR1Q14596 966 aa15.28■□□□□ 0.04
GDAP1-201ENST00000220822 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
GDAP1-201ENST00000220822 KCNH8Q96L42 1107 aa15.27■□□□□ 0.04
GDAP1-201ENST00000220822 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
GDAP1-201ENST00000220822 ATP1B4Q9UN42 357 aaPredicted RBP15.19■□□□□ 0.02
GDAP1-201ENST00000220822 CCDC136Q96JN2 1154 aa15.16■□□□□ 0.02
GDAP1-201ENST00000220822 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
GDAP1-201ENST00000220822 RBM19Q9Y4C8 960 aaKnown RBP15.09■□□□□ 0.01
GDAP1-201ENST00000220822 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
GDAP1-201ENST00000220822 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.06■□□□□ 0
GDAP1-201ENST00000220822 PRKCSHP14314 528 aaPredicted RBP15.04■□□□□ -0
GDAP1-201ENST00000220822 POLR3GLQ9BT43 218 aa15.02□□□□□ -0.01
GDAP1-201ENST00000220822 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
GDAP1-201ENST00000220822 NPM2Q86SE8 214 aaKnown RBP14.98□□□□□ -0.01
GDAP1-201ENST00000220822 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
GDAP1-201ENST00000220822 DEKP35659 375 aaKnown RBP14.91□□□□□ -0.02
GDAP1-201ENST00000220822 RTL5Q5HYW3 569 aaPredicted RBP14.9□□□□□ -0.02
GDAP1-201ENST00000220822 HNRNPUQ00839 825 aaKnown RBP eCLIP14.89□□□□□ -0.03
GDAP1-201ENST00000220822 B4GALNT3Q6L9W6 998 aa14.81□□□□□ -0.04
GDAP1-201ENST00000220822 MSH5O43196 834 aa14.79□□□□□ -0.04
GDAP1-201ENST00000220822 ANP32CO43423 234 aa14.79□□□□□ -0.04
GDAP1-201ENST00000220822 FAM50AQ14320 339 aaKnown RBP14.79□□□□□ -0.04
GDAP1-201ENST00000220822 FAM9BQ8IZU0 186 aa14.79□□□□□ -0.04
GDAP1-201ENST00000220822 ARXQ96QS3 562 aa14.78□□□□□ -0.04
GDAP1-201ENST00000220822 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
GDAP1-201ENST00000220822 SALL2Q9Y467 1007 aaPredicted RBP14.78□□□□□ -0.04
GDAP1-201ENST00000220822 SIN3AQ96ST3 1273 aa14.76□□□□□ -0.05
GDAP1-201ENST00000220822 LAS1LQ9Y4W2 734 aaKnown RBP14.74□□□□□ -0.05
GDAP1-201ENST00000220822 IL27Q8NEV9 243 aa14.68□□□□□ -0.06
GDAP1-201ENST00000220822 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
GDAP1-201ENST00000220822 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
GDAP1-201ENST00000220822 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
GDAP1-201ENST00000220822 ABCC9O60706 1549 aa14.62□□□□□ -0.07
GDAP1-201ENST00000220822 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
GDAP1-201ENST00000220822 ANP32AP39687 249 aaKnown RBP14.58□□□□□ -0.08
GDAP1-201ENST00000220822 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.08
GDAP1-201ENST00000220822 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
GDAP1-201ENST00000220822 ZNF326Q5BKZ1 582 aaKnown RBP14.56□□□□□ -0.08
GDAP1-201ENST00000220822 CLSPNQ9HAW4 1339 aa14.55□□□□□ -0.08
GDAP1-201ENST00000220822 DAXXQ9UER7 740 aaPredicted RBP14.54□□□□□ -0.08
GDAP1-201ENST00000220822 NOP58Q9Y2X3 529 aaKnown RBP14.54□□□□□ -0.08
GDAP1-201ENST00000220822 SOGA1O94964 1423 aa14.54□□□□□ -0.08
GDAP1-201ENST00000220822 TIMELESSQ9UNS1 1208 aa14.54□□□□□ -0.08
GDAP1-201ENST00000220822 ARID4BQ4LE39 1312 aaPredicted RBP14.53□□□□□ -0.08
GDAP1-201ENST00000220822 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
GDAP1-201ENST00000220822 KANK4Q5T7N3 995 aaPredicted RBP14.5□□□□□ -0.09
GDAP1-201ENST00000220822 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
GDAP1-201ENST00000220822 NEFMP07197 916 aa14.49□□□□□ -0.09
GDAP1-201ENST00000220822 NACADO15069 1562 aa14.48□□□□□ -0.09
GDAP1-201ENST00000220822 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
GDAP1-201ENST00000220822 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms