RNA–Protein interactions for RNA: ENST00000475833.1

PCK1-204, Transcript of phosphoenolpyruvate carboxykinase 1, humanhuman

TSL 2

Gene PCK1, Length 1,037 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1-204ENST00000475833 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
PCK1-204ENST00000475833 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
PCK1-204ENST00000475833 ABCC9O60706 1549 aa27.06■■□□□ 1.92
PCK1-204ENST00000475833 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
PCK1-204ENST00000475833 NACADO15069 1562 aa26.26■■□□□ 1.79
PCK1-204ENST00000475833 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
PCK1-204ENST00000475833 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
PCK1-204ENST00000475833 MYO15BQ96JP2 1530 aa26.16■■□□□ 1.78
PCK1-204ENST00000475833 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
PCK1-204ENST00000475833 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
PCK1-204ENST00000475833 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
PCK1-204ENST00000475833 BICRAQ9NZM4 1560 aa25.41■■□□□ 1.66
PCK1-204ENST00000475833 PABPN1Q86U42 306 aaKnown RBP eCLIP25.21■■□□□ 1.63
PCK1-204ENST00000475833 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
PCK1-204ENST00000475833 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
PCK1-204ENST00000475833 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
PCK1-204ENST00000475833 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
PCK1-204ENST00000475833 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
PCK1-204ENST00000475833 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
PCK1-204ENST00000475833 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
PCK1-204ENST00000475833 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
PCK1-204ENST00000475833 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
PCK1-204ENST00000475833 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
PCK1-204ENST00000475833 WIZO95785 1651 aa24.22■■□□□ 1.47
PCK1-204ENST00000475833 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
PCK1-204ENST00000475833 HMGXB3Q12766 1538 aa24.16■■□□□ 1.46
PCK1-204ENST00000475833 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
PCK1-204ENST00000475833 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
PCK1-204ENST00000475833 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
PCK1-204ENST00000475833 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
PCK1-204ENST00000475833 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
PCK1-204ENST00000475833 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
PCK1-204ENST00000475833 LAMC3Q9Y6N6 1575 aa23.58■■□□□ 1.37
PCK1-204ENST00000475833 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
PCK1-204ENST00000475833 NESP48681 1621 aa23.51■■□□□ 1.35
PCK1-204ENST00000475833 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
PCK1-204ENST00000475833 CADPSQ9ULU8 1353 aa23.41■■□□□ 1.34
PCK1-204ENST00000475833 CFTRP13569 1480 aa23.38■■□□□ 1.33
PCK1-204ENST00000475833 ERCC6Q03468 1493 aa23.33■■□□□ 1.33
PCK1-204ENST00000475833 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
PCK1-204ENST00000475833 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
PCK1-204ENST00000475833 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
PCK1-204ENST00000475833 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
PCK1-204ENST00000475833 MRC2Q9UBG0 1479 aa23.09■■□□□ 1.29
PCK1-204ENST00000475833 WDR62O43379 1518 aa23.04■■□□□ 1.28
PCK1-204ENST00000475833 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
PCK1-204ENST00000475833 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
PCK1-204ENST00000475833 CUX2O14529 1486 aa22.96■■□□□ 1.27
PCK1-204ENST00000475833 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
PCK1-204ENST00000475833 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
PCK1-204ENST00000475833 CUX1P39880 1505 aa22.86■■□□□ 1.25
PCK1-204ENST00000475833 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
PCK1-204ENST00000475833 SYNJ1O43426 1573 aa22.81■■□□□ 1.24
PCK1-204ENST00000475833 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
PCK1-204ENST00000475833 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
PCK1-204ENST00000475833 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
PCK1-204ENST00000475833 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
PCK1-204ENST00000475833 WDR97A6NE52 1622 aa22.7■■□□□ 1.22
PCK1-204ENST00000475833 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
PCK1-204ENST00000475833 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
PCK1-204ENST00000475833 EIF4G3O43432 1585 aaKnown RBP22.6■■□□□ 1.21
PCK1-204ENST00000475833 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
PCK1-204ENST00000475833 SOGA1O94964 1423 aa22.57■■□□□ 1.2
PCK1-204ENST00000475833 PBRM1Q86U86 1689 aa22.54■■□□□ 1.2
PCK1-204ENST00000475833 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.2
PCK1-204ENST00000475833 ABCA10Q8WWZ4 1543 aa22.51■■□□□ 1.19
PCK1-204ENST00000475833 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
PCK1-204ENST00000475833 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.185e-9■■■■□ 23.4
PCK1-204ENST00000475833 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
PCK1-204ENST00000475833 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
PCK1-204ENST00000475833 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
PCK1-204ENST00000475833 CHD1O14646 1710 aa22.34■■□□□ 1.17
PCK1-204ENST00000475833 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
PCK1-204ENST00000475833 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
PCK1-204ENST00000475833 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
PCK1-204ENST00000475833 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
PCK1-204ENST00000475833 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
PCK1-204ENST00000475833 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
PCK1-204ENST00000475833 ADAMTS12P58397 1594 aa22.26■■□□□ 1.15
PCK1-204ENST00000475833 CUL7Q14999 1698 aa22.25■■□□□ 1.15
PCK1-204ENST00000475833 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
PCK1-204ENST00000475833 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
PCK1-204ENST00000475833 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
PCK1-204ENST00000475833 EEA1Q15075 1411 aa22.08■■□□□ 1.13
PCK1-204ENST00000475833 IGF1RP08069 1367 aa22.06■■□□□ 1.12
PCK1-204ENST00000475833 GRIN2AQ12879 1464 aa22.06■■□□□ 1.12
PCK1-204ENST00000475833 FBLN2P98095 1184 aa22.05■■□□□ 1.12
PCK1-204ENST00000475833 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
PCK1-204ENST00000475833 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
PCK1-204ENST00000475833 CTTNBP2Q8WZ74 1663 aa21.98■■□□□ 1.11
PCK1-204ENST00000475833 CARMIL1Q5VZK9 1371 aa21.98■■□□□ 1.11
PCK1-204ENST00000475833 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
PCK1-204ENST00000475833 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
PCK1-204ENST00000475833 KIF21BO75037 1637 aa21.95■■□□□ 1.1
PCK1-204ENST00000475833 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
PCK1-204ENST00000475833 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
PCK1-204ENST00000475833 PRXQ9BXM0 1461 aa21.91■■□□□ 1.1
PCK1-204ENST00000475833 NUP160Q12769 1436 aa21.9■■□□□ 1.1
PCK1-204ENST00000475833 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
PCK1-204ENST00000475833 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms