RNA–Protein interactions for RNA: ENST00000521841.1

PSD3-216, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 4

Gene PSD3, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-216ENST00000521841 NISCHQ9Y2I1 1504 aa47.11■■■■■ 5.13
PSD3-216ENST00000521841 CCDC180Q9P1Z9 1646 aa41.93■■■■■ 4.3
PSD3-216ENST00000521841 ABCC9O60706 1549 aa41.52■■■■■ 4.24
PSD3-216ENST00000521841 RB1CC1Q8TDY2 1594 aa39.59■■■■□ 3.93
PSD3-216ENST00000521841 NACADO15069 1562 aa39.49■■■■□ 3.91
PSD3-216ENST00000521841 MYO15BQ96JP2 1530 aa39.31■■■■□ 3.88
PSD3-216ENST00000521841 DCAF8L2P0C7V8 631 aa39.27■■■■□ 3.88
PSD3-216ENST00000521841 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
PSD3-216ENST00000521841 DCAF1Q9Y4B6 1507 aa39.06■■■■□ 3.84
PSD3-216ENST00000521841 DNAJC5BQ9UF47 199 aa38.95■■■■□ 3.83
PSD3-216ENST00000521841 UNC13AQ9UPW8 1703 aa38.9■■■■□ 3.82
PSD3-216ENST00000521841 PABPN1Q86U42 306 aaKnown RBP eCLIP38.6■■■■□ 3.77
PSD3-216ENST00000521841 BICRAQ9NZM4 1560 aa38.57■■■■□ 3.77
PSD3-216ENST00000521841 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
PSD3-216ENST00000521841 SHROOM4Q9ULL8 1493 aa38.03■■■■□ 3.68
PSD3-216ENST00000521841 CC2D2AQ9P2K1 1620 aa37.6■■■■□ 3.61
PSD3-216ENST00000521841 EIF4G1Q04637 1599 aaKnown RBP37.54■■■■□ 3.6
PSD3-216ENST00000521841 CECR2Q9BXF3 1484 aa37.39■■■■□ 3.58
PSD3-216ENST00000521841 SMARCA4P51532 1647 aa36.54■■■■□ 3.44
PSD3-216ENST00000521841 BAZ1AQ9NRL2 1556 aaPredicted RBP36.51■■■■□ 3.44
PSD3-216ENST00000521841 NCAPD3P42695 1498 aa36.48■■■■□ 3.43
PSD3-216ENST00000521841 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
PSD3-216ENST00000521841 SMARCA2P51531 1590 aa36.36■■■■□ 3.41
PSD3-216ENST00000521841 PEG3Q9GZU2 1588 aa36.28■■■■□ 3.4
PSD3-216ENST00000521841 MROH2BQ7Z745 1585 aa36.26■■■■□ 3.39
PSD3-216ENST00000521841 HMGXB3Q12766 1538 aa36.24■■■■□ 3.39
PSD3-216ENST00000521841 BAZ1BQ9UIG0 1483 aaKnown RBP36.06■■■■□ 3.36
PSD3-216ENST00000521841 RSF1Q96T23 1441 aaPredicted RBP35.84■■■■□ 3.33
PSD3-216ENST00000521841 WIZO95785 1651 aa35.82■■■■□ 3.33
PSD3-216ENST00000521841 CUX2O14529 1486 aa35.78■■■■□ 3.32
PSD3-216ENST00000521841 NESP48681 1621 aa35.75■■■■□ 3.31
PSD3-216ENST00000521841 ERCC6Q03468 1493 aa35.75■■■■□ 3.31
PSD3-216ENST00000521841 DNAJC5Q9H3Z4 198 aa35.64■■■■□ 3.3
PSD3-216ENST00000521841 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.28
PSD3-216ENST00000521841 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
PSD3-216ENST00000521841 THOC2Q8NI27 1593 aaKnown RBP35.45■■■■□ 3.27
PSD3-216ENST00000521841 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.25
PSD3-216ENST00000521841 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
PSD3-216ENST00000521841 PDS5BQ9NTI5 1447 aa35.25■■■■□ 3.23
PSD3-216ENST00000521841 CFTRP13569 1480 aa35.15■■■■□ 3.22
PSD3-216ENST00000521841 CCDC88BA6NC98 1476 aa35.08■■■■□ 3.21
PSD3-216ENST00000521841 MRC2Q9UBG0 1479 aa34.96■■■■□ 3.19
PSD3-216ENST00000521841 WDR62O43379 1518 aa34.94■■■■□ 3.18
PSD3-216ENST00000521841 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
PSD3-216ENST00000521841 CEP164Q9UPV0 1460 aa34.87■■■■□ 3.17
PSD3-216ENST00000521841 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
PSD3-216ENST00000521841 SUPT5HO00267 1087 aaKnown RBP34.7■■■■□ 3.15
PSD3-216ENST00000521841 URB2Q14146 1524 aaKnown RBP34.57■■■■□ 3.12
PSD3-216ENST00000521841 ABCC8Q09428 1581 aa34.41■■■■□ 3.1
PSD3-216ENST00000521841 TOPBP1Q92547 1522 aa34.35■■■■□ 3.09
PSD3-216ENST00000521841 DNMBPQ6XZF7 1577 aa34.29■■■■□ 3.08
PSD3-216ENST00000521841 IFT140Q96RY7 1462 aa34.18■■■■□ 3.06
PSD3-216ENST00000521841 ZNF608Q9ULD9 1512 aaPredicted RBP34.12■■■■□ 3.05
PSD3-216ENST00000521841 POLA1P09884 1462 aaPredicted RBP34.05■■■■□ 3.04
PSD3-216ENST00000521841 OSCARQ8IYS5 282 aa34.04■■■■□ 3.04
PSD3-216ENST00000521841 CUX1P39880 1505 aa34.02■■■■□ 3.04
PSD3-216ENST00000521841 TARBP1Q13395 1621 aaKnown RBP34■■■■□ 3.03
PSD3-216ENST00000521841 TRIM41Q8WV44 630 aa33.96■■■■□ 3.03
PSD3-216ENST00000521841 EIF4G3O43432 1585 aaKnown RBP33.96■■■■□ 3.03
PSD3-216ENST00000521841 FGD5Q6ZNL6 1462 aa33.92■■■■□ 3.02
PSD3-216ENST00000521841 SOGA1O94964 1423 aa33.91■■■■□ 3.02
PSD3-216ENST00000521841 RAD54L2Q9Y4B4 1467 aa33.86■■■■□ 3.01
PSD3-216ENST00000521841 AQRO60306 1485 aaKnown RBP eCLIP33.79■■■■□ 3
PSD3-216ENST00000521841 WDR97A6NE52 1622 aa33.77■■■■□ 3
PSD3-216ENST00000521841 WRNQ14191 1432 aaPredicted RBP eCLIP33.77■■■■□ 3
PSD3-216ENST00000521841 RIMBP3CA6NJZ7 1639 aa33.76■■■■□ 3
PSD3-216ENST00000521841 RIMBP3BA6NNM3 1639 aa33.76■■■■□ 3
PSD3-216ENST00000521841 RIMBP3Q9UFD9 1639 aa33.76■■■■□ 3
PSD3-216ENST00000521841 CHD1O14646 1710 aa33.72■■■□□ 2.99
PSD3-216ENST00000521841 TOP2BQ02880 1626 aa33.71■■■□□ 2.99
PSD3-216ENST00000521841 BIVM-ERCC5R4GMW8 1640 aa33.71■■■□□ 2.99
PSD3-216ENST00000521841 TDRD9Q8NDG6 1382 aaKnown RBP33.71■■■□□ 2.99
PSD3-216ENST00000521841 SYNJ1O43426 1573 aa33.64■■■□□ 2.98
PSD3-216ENST00000521841 ABCA10Q8WWZ4 1543 aa33.64■■■□□ 2.98
PSD3-216ENST00000521841 ARHGEF11O15085 1522 aa33.63■■■□□ 2.97
PSD3-216ENST00000521841 GRIN2BQ13224 1484 aa33.54■■■□□ 2.96
PSD3-216ENST00000521841 GAPVD1Q14C86 1478 aa33.51■■■□□ 2.96
PSD3-216ENST00000521841 ABCA5Q8WWZ7 1642 aa33.48■■■□□ 2.95
PSD3-216ENST00000521841 MAGI1Q96QZ7 1491 aaPredicted RBP33.48■■■□□ 2.95
PSD3-216ENST00000521841 SNAPC4Q5SXM2 1469 aa33.45■■■□□ 2.95
PSD3-216ENST00000521841 PBRM1Q86U86 1689 aa33.38■■■□□ 2.93
PSD3-216ENST00000521841 FBLN2P98095 1184 aa33.35■■■□□ 2.93
PSD3-216ENST00000521841 SYNJ2O15056 1496 aa33.34■■■□□ 2.93
PSD3-216ENST00000521841 CLASP1Q7Z460 1538 aa33.33■■■□□ 2.93
PSD3-216ENST00000521841 ARAP1Q96P48 1450 aa33.32■■■□□ 2.92
PSD3-216ENST00000521841 CHMP7Q8WUX9 453 aaPredicted RBP33.31■■■□□ 2.92
PSD3-216ENST00000521841 ERICH3Q5RHP9 1530 aa33.24■■■□□ 2.91
PSD3-216ENST00000521841 CYB5RLQ6IPT4 315 aa33.23■■■□□ 2.91
PSD3-216ENST00000521841 ADAMTS12P58397 1594 aa33.14■■■□□ 2.9
PSD3-216ENST00000521841 FHAD1B1AJZ9 1412 aa33.14■■■□□ 2.9
PSD3-216ENST00000521841 GRIN2AQ12879 1464 aa33.09■■■□□ 2.89
PSD3-216ENST00000521841 KIF27Q86VH2 1401 aa33.09■■■□□ 2.89
PSD3-216ENST00000521841 IGF1RP08069 1367 aa33.01■■■□□ 2.88
PSD3-216ENST00000521841 NUP160Q12769 1436 aa33■■■□□ 2.87
PSD3-216ENST00000521841 CEP170Q5SW79 1584 aa32.9■■■□□ 2.86
PSD3-216ENST00000521841 CUL7Q14999 1698 aa32.86■■■□□ 2.85
PSD3-216ENST00000521841 ERCC6L2Q5T890 1561 aa32.82■■■□□ 2.84
PSD3-216ENST00000521841 SHROOM2Q13796 1616 aa32.78■■■□□ 2.84
PSD3-216ENST00000521841 CARMIL1Q5VZK9 1371 aa32.78■■■□□ 2.84
PSD3-216ENST00000521841 TRHP20396 242 aaPredicted RBP32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms