RNA–Protein interactions for RNA: ENST00000521475.1

PSD3-215, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-215ENST00000521475 NISCHQ9Y2I1 1504 aa25.23■■□□□ 1.63
PSD3-215ENST00000521475 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
PSD3-215ENST00000521475 ABCC9O60706 1549 aa22.29■■□□□ 1.16
PSD3-215ENST00000521475 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
PSD3-215ENST00000521475 RB1CC1Q8TDY2 1594 aa21.25■□□□□ 0.99
PSD3-215ENST00000521475 NACADO15069 1562 aa21.19■□□□□ 0.98
PSD3-215ENST00000521475 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
PSD3-215ENST00000521475 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
PSD3-215ENST00000521475 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.93
PSD3-215ENST00000521475 DCAF1Q9Y4B6 1507 aa20.81■□□□□ 0.92
PSD3-215ENST00000521475 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
PSD3-215ENST00000521475 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
PSD3-215ENST00000521475 BICRAQ9NZM4 1560 aa20.67■□□□□ 0.9
PSD3-215ENST00000521475 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
PSD3-215ENST00000521475 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.85
PSD3-215ENST00000521475 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
PSD3-215ENST00000521475 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
PSD3-215ENST00000521475 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
PSD3-215ENST00000521475 NCAPD3P42695 1498 aa19.61■□□□□ 0.73
PSD3-215ENST00000521475 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
PSD3-215ENST00000521475 SMARCA4P51532 1647 aa19.58■□□□□ 0.72
PSD3-215ENST00000521475 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.71
PSD3-215ENST00000521475 SMARCA2P51531 1590 aa19.48■□□□□ 0.71
PSD3-215ENST00000521475 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
PSD3-215ENST00000521475 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
PSD3-215ENST00000521475 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
PSD3-215ENST00000521475 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
PSD3-215ENST00000521475 NESP48681 1621 aa19.24■□□□□ 0.67
PSD3-215ENST00000521475 WIZO95785 1651 aa19.21■□□□□ 0.67
PSD3-215ENST00000521475 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
PSD3-215ENST00000521475 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
PSD3-215ENST00000521475 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
PSD3-215ENST00000521475 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
PSD3-215ENST00000521475 CUX2O14529 1486 aa19.04■□□□□ 0.64
PSD3-215ENST00000521475 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
PSD3-215ENST00000521475 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
PSD3-215ENST00000521475 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.62
PSD3-215ENST00000521475 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
PSD3-215ENST00000521475 CFTRP13569 1480 aa18.87■□□□□ 0.61
PSD3-215ENST00000521475 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
PSD3-215ENST00000521475 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
PSD3-215ENST00000521475 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
PSD3-215ENST00000521475 MRC2Q9UBG0 1479 aa18.78■□□□□ 0.6
PSD3-215ENST00000521475 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
PSD3-215ENST00000521475 WDR62O43379 1518 aa18.72■□□□□ 0.59
PSD3-215ENST00000521475 URB2Q14146 1524 aaKnown RBP18.63■□□□□ 0.57
PSD3-215ENST00000521475 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
PSD3-215ENST00000521475 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
PSD3-215ENST00000521475 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
PSD3-215ENST00000521475 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
PSD3-215ENST00000521475 IFT140Q96RY7 1462 aa18.39■□□□□ 0.54
PSD3-215ENST00000521475 ZNF608Q9ULD9 1512 aaPredicted RBP18.39■□□□□ 0.53
PSD3-215ENST00000521475 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
PSD3-215ENST00000521475 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
PSD3-215ENST00000521475 POLA1P09884 1462 aaPredicted RBP18.3■□□□□ 0.52
PSD3-215ENST00000521475 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.52
PSD3-215ENST00000521475 RAD54L2Q9Y4B4 1467 aa18.27■□□□□ 0.52
PSD3-215ENST00000521475 SOGA1O94964 1423 aa18.26■□□□□ 0.51
PSD3-215ENST00000521475 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
PSD3-215ENST00000521475 CUX1P39880 1505 aa18.25■□□□□ 0.51
PSD3-215ENST00000521475 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
PSD3-215ENST00000521475 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
PSD3-215ENST00000521475 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
PSD3-215ENST00000521475 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
PSD3-215ENST00000521475 FBLN2P98095 1184 aa18.11■□□□□ 0.49
PSD3-215ENST00000521475 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
PSD3-215ENST00000521475 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
PSD3-215ENST00000521475 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
PSD3-215ENST00000521475 GRIN2BQ13224 1484 aa18.02■□□□□ 0.48
PSD3-215ENST00000521475 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
PSD3-215ENST00000521475 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
PSD3-215ENST00000521475 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
PSD3-215ENST00000521475 CHD1O14646 1710 aa18■□□□□ 0.47
PSD3-215ENST00000521475 SYNJ1O43426 1573 aa18■□□□□ 0.47
PSD3-215ENST00000521475 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
PSD3-215ENST00000521475 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
PSD3-215ENST00000521475 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
PSD3-215ENST00000521475 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
PSD3-215ENST00000521475 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
PSD3-215ENST00000521475 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
PSD3-215ENST00000521475 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
PSD3-215ENST00000521475 ABCA5Q8WWZ7 1642 aa17.93■□□□□ 0.46
PSD3-215ENST00000521475 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
PSD3-215ENST00000521475 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
PSD3-215ENST00000521475 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
PSD3-215ENST00000521475 CLASP1Q7Z460 1538 aa17.84■□□□□ 0.45
PSD3-215ENST00000521475 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
PSD3-215ENST00000521475 FHAD1B1AJZ9 1412 aa17.8■□□□□ 0.44
PSD3-215ENST00000521475 GRIN2AQ12879 1464 aa17.79■□□□□ 0.44
PSD3-215ENST00000521475 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
PSD3-215ENST00000521475 ADAMTS12P58397 1594 aa17.77■□□□□ 0.44
PSD3-215ENST00000521475 NUP160Q12769 1436 aa17.73■□□□□ 0.43
PSD3-215ENST00000521475 IGF1RP08069 1367 aa17.72■□□□□ 0.43
PSD3-215ENST00000521475 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
PSD3-215ENST00000521475 KIF27Q86VH2 1401 aa17.69■□□□□ 0.42
PSD3-215ENST00000521475 JPH4Q96JJ6 628 aa17.64■□□□□ 0.41
PSD3-215ENST00000521475 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
PSD3-215ENST00000521475 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.4
PSD3-215ENST00000521475 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
PSD3-215ENST00000521475 SHROOM2Q13796 1616 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms