RNA–Protein interactions for RNA: ENST00000511160.5

PACRGL-226, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-226ENST00000511160 NISCHQ9Y2I1 1504 aa50.15■■■■■ 5.62
PACRGL-226ENST00000511160 CCDC180Q9P1Z9 1646 aa44.83■■■■■ 4.77
PACRGL-226ENST00000511160 ABCC9O60706 1549 aa44.18■■■■■ 4.66
PACRGL-226ENST00000511160 RB1CC1Q8TDY2 1594 aa42.39■■■■■ 4.38
PACRGL-226ENST00000511160 NACADO15069 1562 aa42.25■■■■■ 4.35
PACRGL-226ENST00000511160 DCAF8L2P0C7V8 631 aa41.99■■■■■ 4.31
PACRGL-226ENST00000511160 MYO15BQ96JP2 1530 aa41.9■■■■■ 4.3
PACRGL-226ENST00000511160 ZCCHC6Q5VYS8 1495 aaKnown RBP41.72■■■■■ 4.27
PACRGL-226ENST00000511160 DCAF1Q9Y4B6 1507 aa41.54■■■■■ 4.24
PACRGL-226ENST00000511160 UNC13AQ9UPW8 1703 aa41.27■■■■■ 4.2
PACRGL-226ENST00000511160 PABPN1Q86U42 306 aaKnown RBP eCLIP41.15■■■■■ 4.18
PACRGL-226ENST00000511160 BICRAQ9NZM4 1560 aa41.03■■■■■ 4.16
PACRGL-226ENST00000511160 SCRIBQ14160 1630 aa40.81■■■■■ 4.12
PACRGL-226ENST00000511160 DNAJC5BQ9UF47 199 aa40.8■■■■■ 4.12
PACRGL-226ENST00000511160 SHROOM4Q9ULL8 1493 aa40.77■■■■■ 4.12
PACRGL-226ENST00000511160 EIF4G1Q04637 1599 aaKnown RBP40.05■■■■■ 4
PACRGL-226ENST00000511160 CC2D2AQ9P2K1 1620 aa39.95■■■■□ 3.99
PACRGL-226ENST00000511160 CECR2Q9BXF3 1484 aa39.79■■■■□ 3.96
PACRGL-226ENST00000511160 SMARCA4P51532 1647 aa39■■■■□ 3.83
PACRGL-226ENST00000511160 NCAPD3P42695 1498 aa38.96■■■■□ 3.83
PACRGL-226ENST00000511160 BAZ1AQ9NRL2 1556 aaPredicted RBP38.95■■■■□ 3.83
PACRGL-226ENST00000511160 ATAD2BQ9ULI0 1458 aa38.9■■■■□ 3.82
PACRGL-226ENST00000511160 SMARCA2P51531 1590 aa38.89■■■■□ 3.82
PACRGL-226ENST00000511160 HMGXB3Q12766 1538 aa38.78■■■■□ 3.8
PACRGL-226ENST00000511160 PEG3Q9GZU2 1588 aa38.67■■■■□ 3.78
PACRGL-226ENST00000511160 BAZ1BQ9UIG0 1483 aaKnown RBP38.6■■■■□ 3.77
PACRGL-226ENST00000511160 MROH2BQ7Z745 1585 aa38.59■■■■□ 3.77
PACRGL-226ENST00000511160 ERCC6Q03468 1493 aa38.2■■■■□ 3.71
PACRGL-226ENST00000511160 WIZO95785 1651 aa38.14■■■■□ 3.7
PACRGL-226ENST00000511160 NESP48681 1621 aa38.07■■■■□ 3.68
PACRGL-226ENST00000511160 RSF1Q96T23 1441 aaPredicted RBP38.03■■■■□ 3.68
PACRGL-226ENST00000511160 LAMC3Q9Y6N6 1575 aa38.02■■■■□ 3.68
PACRGL-226ENST00000511160 CUX2O14529 1486 aa37.96■■■■□ 3.67
PACRGL-226ENST00000511160 TOP2AP11388 1531 aaKnown RBP37.81■■■■□ 3.64
PACRGL-226ENST00000511160 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
PACRGL-226ENST00000511160 PDS5BQ9NTI5 1447 aa37.79■■■■□ 3.64
PACRGL-226ENST00000511160 THOC2Q8NI27 1593 aaKnown RBP37.66■■■■□ 3.62
PACRGL-226ENST00000511160 KIF21AQ7Z4S6 1674 aa37.62■■■■□ 3.61
PACRGL-226ENST00000511160 CFTRP13569 1480 aa37.5■■■■□ 3.59
PACRGL-226ENST00000511160 MRC2Q9UBG0 1479 aa37.42■■■■□ 3.58
PACRGL-226ENST00000511160 CEP164Q9UPV0 1460 aa37.39■■■■□ 3.58
PACRGL-226ENST00000511160 FANCD2Q9BXW9 1451 aa37.37■■■■□ 3.57
PACRGL-226ENST00000511160 WDR62O43379 1518 aa37.31■■■■□ 3.56
PACRGL-226ENST00000511160 CCDC88BA6NC98 1476 aa37.3■■■■□ 3.56
PACRGL-226ENST00000511160 DNAJC5Q9H3Z4 198 aa37.18■■■■□ 3.54
PACRGL-226ENST00000511160 PRDM2Q13029 1718 aa37.15■■■■□ 3.54
PACRGL-226ENST00000511160 URB2Q14146 1524 aaKnown RBP36.99■■■■□ 3.51
PACRGL-226ENST00000511160 ABCC8Q09428 1581 aa36.75■■■■□ 3.47
PACRGL-226ENST00000511160 TOPBP1Q92547 1522 aa36.71■■■■□ 3.47
PACRGL-226ENST00000511160 SUPT5HO00267 1087 aaKnown RBP36.69■■■■□ 3.46
PACRGL-226ENST00000511160 DNMBPQ6XZF7 1577 aa36.66■■■■□ 3.46
PACRGL-226ENST00000511160 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
PACRGL-226ENST00000511160 ZNF608Q9ULD9 1512 aaPredicted RBP36.41■■■■□ 3.42
PACRGL-226ENST00000511160 POLA1P09884 1462 aaPredicted RBP36.37■■■■□ 3.41
PACRGL-226ENST00000511160 TARBP1Q13395 1621 aaKnown RBP36.32■■■■□ 3.4
PACRGL-226ENST00000511160 EIF4G3O43432 1585 aaKnown RBP36.32■■■■□ 3.4
PACRGL-226ENST00000511160 CUX1P39880 1505 aa36.26■■■■□ 3.4
PACRGL-226ENST00000511160 OSCARQ8IYS5 282 aa36.24■■■■□ 3.39
PACRGL-226ENST00000511160 FGD5Q6ZNL6 1462 aa36.23■■■■□ 3.39
PACRGL-226ENST00000511160 SOGA1O94964 1423 aa36.2■■■■□ 3.39
PACRGL-226ENST00000511160 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
PACRGL-226ENST00000511160 AQRO60306 1485 aaKnown RBP eCLIP36.15■■■■□ 3.38
PACRGL-226ENST00000511160 WDR97A6NE52 1622 aa36.13■■■■□ 3.37
PACRGL-226ENST00000511160 TDRD9Q8NDG6 1382 aaKnown RBP36.02■■■■□ 3.36
PACRGL-226ENST00000511160 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.34
PACRGL-226ENST00000511160 ABCA10Q8WWZ4 1543 aa35.88■■■■□ 3.33
PACRGL-226ENST00000511160 GRIN2BQ13224 1484 aa35.87■■■■□ 3.33
PACRGL-226ENST00000511160 TOP2BQ02880 1626 aa35.86■■■■□ 3.33
PACRGL-226ENST00000511160 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
PACRGL-226ENST00000511160 CHD1O14646 1710 aa35.86■■■■□ 3.33
PACRGL-226ENST00000511160 BIVM-ERCC5R4GMW8 1640 aa35.86■■■■□ 3.33
PACRGL-226ENST00000511160 MAGI1Q96QZ7 1491 aaPredicted RBP35.86■■■■□ 3.33
PACRGL-226ENST00000511160 FBLN2P98095 1184 aa35.82■■■■□ 3.32
PACRGL-226ENST00000511160 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
PACRGL-226ENST00000511160 SYNJ1O43426 1573 aa35.8■■■■□ 3.32
PACRGL-226ENST00000511160 ABCA5Q8WWZ7 1642 aa35.76■■■■□ 3.32
PACRGL-226ENST00000511160 TRIM41Q8WV44 630 aa35.76■■■■□ 3.32
PACRGL-226ENST00000511160 PBRM1Q86U86 1689 aa35.72■■■■□ 3.31
PACRGL-226ENST00000511160 SYNJ2O15056 1496 aa35.7■■■■□ 3.31
PACRGL-226ENST00000511160 RIMBP3CA6NJZ7 1639 aa35.68■■■■□ 3.3
PACRGL-226ENST00000511160 RIMBP3BA6NNM3 1639 aa35.68■■■■□ 3.3
PACRGL-226ENST00000511160 RIMBP3Q9UFD9 1639 aa35.68■■■■□ 3.3
PACRGL-226ENST00000511160 CHMP7Q8WUX9 453 aaPredicted RBP35.68■■■■□ 3.3
PACRGL-226ENST00000511160 ARHGEF11O15085 1522 aa35.67■■■■□ 3.3
PACRGL-226ENST00000511160 CLASP1Q7Z460 1538 aa35.53■■■■□ 3.28
PACRGL-226ENST00000511160 ERICH3Q5RHP9 1530 aa35.47■■■■□ 3.27
PACRGL-226ENST00000511160 ADAMTS12P58397 1594 aa35.47■■■■□ 3.27
PACRGL-226ENST00000511160 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
PACRGL-226ENST00000511160 FHAD1B1AJZ9 1412 aa35.4■■■■□ 3.26
PACRGL-226ENST00000511160 ARAP1Q96P48 1450 aa35.34■■■■□ 3.25
PACRGL-226ENST00000511160 CYB5RLQ6IPT4 315 aa35.3■■■■□ 3.24
PACRGL-226ENST00000511160 NUP160Q12769 1436 aa35.26■■■■□ 3.24
PACRGL-226ENST00000511160 KIF27Q86VH2 1401 aa35.22■■■■□ 3.23
PACRGL-226ENST00000511160 CEP170Q5SW79 1584 aa35.21■■■■□ 3.23
PACRGL-226ENST00000511160 CUL7Q14999 1698 aa35.06■■■■□ 3.2
PACRGL-226ENST00000511160 IGF1RP08069 1367 aa35.04■■■■□ 3.2
PACRGL-226ENST00000511160 SHROOM2Q13796 1616 aa35.03■■■■□ 3.2
PACRGL-226ENST00000511160 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
PACRGL-226ENST00000511160 ERCC6L2Q5T890 1561 aa34.92■■■■□ 3.18
PACRGL-226ENST00000511160 CARMIL1Q5VZK9 1371 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms