RNA–Protein interactions for RNA: ENST00000328257.12

PPME1-201, Transcript of protein phosphatase methylesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPME1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-201ENST00000328257 PELP1Q8IZL8 1130 aaKnown RBP23.07■■□□□ 1.28
PPME1-201ENST00000328257 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
PPME1-201ENST00000328257 MYT1Q01538 1121 aa22.59■■□□□ 1.21
PPME1-201ENST00000328257 HRCP23327 699 aa21.91■■□□□ 1.1
PPME1-201ENST00000328257 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
PPME1-201ENST00000328257 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
PPME1-201ENST00000328257 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
PPME1-201ENST00000328257 PRKCSHP14314 528 aaPredicted RBP21.05■□□□□ 0.96
PPME1-201ENST00000328257 BCL11AQ9H165 835 aa20.87■□□□□ 0.93
PPME1-201ENST00000328257 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
PPME1-201ENST00000328257 FAM9AQ8IZU1 332 aaPredicted RBP20.64■□□□□ 0.89
PPME1-201ENST00000328257 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
PPME1-201ENST00000328257 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
PPME1-201ENST00000328257 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
PPME1-201ENST00000328257 CENPBP07199 599 aaPredicted RBP20.5■□□□□ 0.87
PPME1-201ENST00000328257 APLP2Q06481 763 aa20.46■□□□□ 0.87
PPME1-201ENST00000328257 GTF3C3Q9Y5Q9 886 aa20.4■□□□□ 0.86
PPME1-201ENST00000328257 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
PPME1-201ENST00000328257 ZEB1P37275 1124 aaPredicted RBP20.21■□□□□ 0.83
PPME1-201ENST00000328257 ABCC9O60706 1549 aa20.19■□□□□ 0.82
PPME1-201ENST00000328257 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
PPME1-201ENST00000328257 ANP32EQ9BTT0 268 aa20.06■□□□□ 0.8
PPME1-201ENST00000328257 TRIM26Q12899 539 aaPredicted RBP19.85■□□□□ 0.77
PPME1-201ENST00000328257 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
PPME1-201ENST00000328257 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
PPME1-201ENST00000328257 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
PPME1-201ENST00000328257 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
PPME1-201ENST00000328257 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
PPME1-201ENST00000328257 ANO8Q9HCE9 1232 aaPredicted RBP19.42■□□□□ 0.7
PPME1-201ENST00000328257 TSHZ2Q9NRE2 1034 aa19.37■□□□□ 0.69
PPME1-201ENST00000328257 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
PPME1-201ENST00000328257 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
PPME1-201ENST00000328257 EIF5BO60841 1220 aaKnown RBP19.32■□□□□ 0.68
PPME1-201ENST00000328257 NACADO15069 1562 aa19.3■□□□□ 0.68
PPME1-201ENST00000328257 UBE2Q2Q8WVN8 375 aa19.28■□□□□ 0.68
PPME1-201ENST00000328257 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
PPME1-201ENST00000328257 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
PPME1-201ENST00000328257 DAXXQ9UER7 740 aaPredicted RBP19.21■□□□□ 0.67
PPME1-201ENST00000328257 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
PPME1-201ENST00000328257 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
PPME1-201ENST00000328257 SUPT16HQ9Y5B9 1047 aaKnown RBP19.11■□□□□ 0.65
PPME1-201ENST00000328257 CLSPNQ9HAW4 1339 aa19.09■□□□□ 0.65
PPME1-201ENST00000328257 SALL2Q9Y467 1007 aaPredicted RBP19.04■□□□□ 0.64
PPME1-201ENST00000328257 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
PPME1-201ENST00000328257 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
PPME1-201ENST00000328257 CCDC136Q96JN2 1154 aa18.96■□□□□ 0.63
PPME1-201ENST00000328257 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
PPME1-201ENST00000328257 ERICH6BQ5W0A0 696 aa18.88■□□□□ 0.61
PPME1-201ENST00000328257 CCER1Q8TC90 406 aaPredicted RBP18.88■□□□□ 0.61
PPME1-201ENST00000328257 MYT1LQ9UL68 1186 aa18.87■□□□□ 0.61
PPME1-201ENST00000328257 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
PPME1-201ENST00000328257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
PPME1-201ENST00000328257 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
PPME1-201ENST00000328257 MIER1Q8N108 512 aa18.84■□□□□ 0.61
PPME1-201ENST00000328257 PKNOX2Q96KN3 472 aa18.84■□□□□ 0.61
PPME1-201ENST00000328257 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
PPME1-201ENST00000328257 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
PPME1-201ENST00000328257 RBM19Q9Y4C8 960 aaKnown RBP18.81■□□□□ 0.6
PPME1-201ENST00000328257 BICRAQ9NZM4 1560 aa18.79■□□□□ 0.6
PPME1-201ENST00000328257 MSH5O43196 834 aa18.75■□□□□ 0.59
PPME1-201ENST00000328257 PODXL2Q9NZ53 605 aa18.73■□□□□ 0.59
PPME1-201ENST00000328257 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
PPME1-201ENST00000328257 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
PPME1-201ENST00000328257 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.67■□□□□ 0.58
PPME1-201ENST00000328257 BCANQ96GW7 911 aa18.5■□□□□ 0.55
PPME1-201ENST00000328257 FANCIQ9NVI1 1328 aa18.49■□□□□ 0.55
PPME1-201ENST00000328257 IL27Q8NEV9 243 aa18.43■□□□□ 0.54
PPME1-201ENST00000328257 RTN4Q9NQC3 1192 aaKnown RBP18.41■□□□□ 0.54
PPME1-201ENST00000328257 FKBP8Q14318 412 aa18.34■□□□□ 0.53
PPME1-201ENST00000328257 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
PPME1-201ENST00000328257 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.51
PPME1-201ENST00000328257 NEFLP07196 543 aa18.23■□□□□ 0.51
PPME1-201ENST00000328257 NBR1Q14596 966 aa18.22■□□□□ 0.51
PPME1-201ENST00000328257 ITGAEP38570 1179 aa18.21■□□□□ 0.51
PPME1-201ENST00000328257 GLIPR1L2Q4G1C9 344 aa18.19■□□□□ 0.5
PPME1-201ENST00000328257 ZMYND15Q9H091 742 aa18.17■□□□□ 0.5
PPME1-201ENST00000328257 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
PPME1-201ENST00000328257 RTL5Q5HYW3 569 aaPredicted RBP18.08■□□□□ 0.48
PPME1-201ENST00000328257 CDK11AQ9UQ88 783 aaPredicted RBP18.08■□□□□ 0.48
PPME1-201ENST00000328257 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
PPME1-201ENST00000328257 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
PPME1-201ENST00000328257 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
PPME1-201ENST00000328257 PDE4CQ08493 712 aa18.01■□□□□ 0.47
PPME1-201ENST00000328257 RSPH6AQ9H0K4 717 aa17.98■□□□□ 0.47
PPME1-201ENST00000328257 A0A0U1RQG5 324 aaPredicted RBP17.96■□□□□ 0.47
PPME1-201ENST00000328257 FGD1P98174 961 aa17.95■□□□□ 0.46
PPME1-201ENST00000328257 C11orf95C9JLR9 678 aaPredicted RBP17.95■□□□□ 0.46
PPME1-201ENST00000328257 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
PPME1-201ENST00000328257 PDIA4P13667 645 aaKnown RBP17.9■□□□□ 0.46
PPME1-201ENST00000328257 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
PPME1-201ENST00000328257 AAMPQ13685 434 aa17.87■□□□□ 0.45
PPME1-201ENST00000328257 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
PPME1-201ENST00000328257 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
PPME1-201ENST00000328257 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
PPME1-201ENST00000328257 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
PPME1-201ENST00000328257 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
PPME1-201ENST00000328257 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
PPME1-201ENST00000328257 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
PPME1-201ENST00000328257 BRPF3Q9ULD4 1205 aa17.8■□□□□ 0.44
PPME1-201ENST00000328257 WASHC2CQ9Y4E1 1318 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms