RNA–Protein interactions for RNA: ENST00000542710.3

PPME1-207, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 3

Gene PPME1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-207ENST00000542710 AEBP2Q6ZN18 517 aaPredicted RBP33.92■■■■□ 3.02
PPME1-207ENST00000542710 CHIC1Q5VXU3 224 aa31.69■■■□□ 2.66
PPME1-207ENST00000542710 NISCHQ9Y2I1 1504 aa31.28■■■□□ 2.6
PPME1-207ENST00000542710 SENP3Q9H4L4 574 aaPredicted RBP29.14■■■□□ 2.26
PPME1-207ENST00000542710 PHF23Q9BUL5 403 aaPredicted RBP28.56■■■□□ 2.16
PPME1-207ENST00000542710 POTEDQ86YR6 584 aa27.63■■■□□ 2.01
PPME1-207ENST00000542710 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
PPME1-207ENST00000542710 FOXD1Q16676 465 aa27.31■■□□□ 1.96
PPME1-207ENST00000542710 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
PPME1-207ENST00000542710 ABCC9O60706 1549 aa26.21■■□□□ 1.79
PPME1-207ENST00000542710 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
PPME1-207ENST00000542710 MSH5O43196 834 aa26.06■■□□□ 1.76
PPME1-207ENST00000542710 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
PPME1-207ENST00000542710 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
PPME1-207ENST00000542710 NACADO15069 1562 aa25.74■■□□□ 1.71
PPME1-207ENST00000542710 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
PPME1-207ENST00000542710 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
PPME1-207ENST00000542710 PIAS4Q8N2W9 510 aaPredicted RBP25.24■■□□□ 1.63
PPME1-207ENST00000542710 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
PPME1-207ENST00000542710 UNC13AQ9UPW8 1703 aa24.71■■□□□ 1.55
PPME1-207ENST00000542710 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
PPME1-207ENST00000542710 PPP6R1Q9UPN7 881 aa24.53■■□□□ 1.52
PPME1-207ENST00000542710 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
PPME1-207ENST00000542710 ADRA2BP18089 450 aa24.39■■□□□ 1.49
PPME1-207ENST00000542710 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
PPME1-207ENST00000542710 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
PPME1-207ENST00000542710 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
PPME1-207ENST00000542710 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
PPME1-207ENST00000542710 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
PPME1-207ENST00000542710 SMARCA4P51532 1647 aa24.07■■□□□ 1.44
PPME1-207ENST00000542710 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
PPME1-207ENST00000542710 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
PPME1-207ENST00000542710 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
PPME1-207ENST00000542710 WIZO95785 1651 aa23.82■■□□□ 1.4
PPME1-207ENST00000542710 PEG3Q9GZU2 1588 aa23.8■■□□□ 1.4
PPME1-207ENST00000542710 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
PPME1-207ENST00000542710 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
PPME1-207ENST00000542710 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
PPME1-207ENST00000542710 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
PPME1-207ENST00000542710 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
PPME1-207ENST00000542710 HMGXB3Q12766 1538 aa23.64■■□□□ 1.37
PPME1-207ENST00000542710 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
PPME1-207ENST00000542710 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
PPME1-207ENST00000542710 CACNB1Q02641 598 aaPredicted RBP23.16■■□□□ 1.3
PPME1-207ENST00000542710 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
PPME1-207ENST00000542710 CFTRP13569 1480 aa23.06■■□□□ 1.28
PPME1-207ENST00000542710 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
PPME1-207ENST00000542710 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
PPME1-207ENST00000542710 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
PPME1-207ENST00000542710 DMRT2Q9Y5R5 561 aa22.9■■□□□ 1.26
PPME1-207ENST00000542710 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
PPME1-207ENST00000542710 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
PPME1-207ENST00000542710 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
PPME1-207ENST00000542710 MAPK8IP2Q13387 824 aaPredicted RBP22.79■■□□□ 1.24
PPME1-207ENST00000542710 NESP48681 1621 aa22.79■■□□□ 1.24
PPME1-207ENST00000542710 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
PPME1-207ENST00000542710 ABCC8Q09428 1581 aa22.75■■□□□ 1.23
PPME1-207ENST00000542710 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
PPME1-207ENST00000542710 TOP2BQ02880 1626 aa22.59■■□□□ 1.21
PPME1-207ENST00000542710 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
PPME1-207ENST00000542710 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
PPME1-207ENST00000542710 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
PPME1-207ENST00000542710 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
PPME1-207ENST00000542710 CUX1P39880 1505 aa22.52■■□□□ 1.2
PPME1-207ENST00000542710 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
PPME1-207ENST00000542710 EEA1Q15075 1411 aa22.51■■□□□ 1.19
PPME1-207ENST00000542710 TOPBP1Q92547 1522 aa22.49■■□□□ 1.19
PPME1-207ENST00000542710 FAM9AQ8IZU1 332 aaPredicted RBP22.45■■□□□ 1.18
PPME1-207ENST00000542710 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
PPME1-207ENST00000542710 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
PPME1-207ENST00000542710 SOGA1O94964 1423 aa22.4■■□□□ 1.18
PPME1-207ENST00000542710 KIF27Q86VH2 1401 aa22.39■■□□□ 1.17
PPME1-207ENST00000542710 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
PPME1-207ENST00000542710 WDR62O43379 1518 aa22.34■■□□□ 1.17
PPME1-207ENST00000542710 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.16
PPME1-207ENST00000542710 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
PPME1-207ENST00000542710 CUX2O14529 1486 aa22.28■■□□□ 1.16
PPME1-207ENST00000542710 IFT140Q96RY7 1462 aa22.27■■□□□ 1.16
PPME1-207ENST00000542710 ABCA10Q8WWZ4 1543 aa22.25■■□□□ 1.15
PPME1-207ENST00000542710 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
PPME1-207ENST00000542710 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
PPME1-207ENST00000542710 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
PPME1-207ENST00000542710 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
PPME1-207ENST00000542710 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
PPME1-207ENST00000542710 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
PPME1-207ENST00000542710 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
PPME1-207ENST00000542710 RNF39Q9H2S5 420 aa22.11■■□□□ 1.13
PPME1-207ENST00000542710 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
PPME1-207ENST00000542710 LOC105371045A0A1W2PR82 267 aa22.08■■□□□ 1.13
PPME1-207ENST00000542710 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
PPME1-207ENST00000542710 DCAF8L1A6NGE4 600 aa22.07■■□□□ 1.12
PPME1-207ENST00000542710 IGF1RP08069 1367 aa22.07■■□□□ 1.12
PPME1-207ENST00000542710 GOLGA3Q08378 1498 aa22.07■■□□□ 1.12
PPME1-207ENST00000542710 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
PPME1-207ENST00000542710 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
PPME1-207ENST00000542710 GRIN2BQ13224 1484 aa22.03■■□□□ 1.12
PPME1-207ENST00000542710 KIF21BO75037 1637 aa22.01■■□□□ 1.11
PPME1-207ENST00000542710 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
PPME1-207ENST00000542710 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
PPME1-207ENST00000542710 CUL7Q14999 1698 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms