RNA–Protein interactions for RNA: ENST00000264042.7

FARP2-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP2, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP2-201ENST00000264042 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
FARP2-201ENST00000264042 DCAF8L2P0C7V8 631 aa27.19■■□□□ 1.94
FARP2-201ENST00000264042 SHROOM4Q9ULL8 1493 aa26.39■■□□□ 1.81
FARP2-201ENST00000264042 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
FARP2-201ENST00000264042 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
FARP2-201ENST00000264042 ABCC9O60706 1549 aa24.6■■□□□ 1.53
FARP2-201ENST00000264042 FAM9AQ8IZU1 332 aaPredicted RBP24.32■■□□□ 1.48
FARP2-201ENST00000264042 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.46
FARP2-201ENST00000264042 TTBK1Q5TCY1 1321 aaPredicted RBP23.81■■□□□ 1.4
FARP2-201ENST00000264042 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.39
FARP2-201ENST00000264042 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
FARP2-201ENST00000264042 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
FARP2-201ENST00000264042 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
FARP2-201ENST00000264042 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
FARP2-201ENST00000264042 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
FARP2-201ENST00000264042 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
FARP2-201ENST00000264042 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
FARP2-201ENST00000264042 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
FARP2-201ENST00000264042 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
FARP2-201ENST00000264042 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
FARP2-201ENST00000264042 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
FARP2-201ENST00000264042 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
FARP2-201ENST00000264042 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
FARP2-201ENST00000264042 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
FARP2-201ENST00000264042 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
FARP2-201ENST00000264042 NACADO15069 1562 aa22.49■■□□□ 1.19
FARP2-201ENST00000264042 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
FARP2-201ENST00000264042 APLP2Q06481 763 aa22.4■■□□□ 1.18
FARP2-201ENST00000264042 ITGAEP38570 1179 aa22.37■■□□□ 1.17
FARP2-201ENST00000264042 WIZO95785 1651 aa22.3■■□□□ 1.16
FARP2-201ENST00000264042 P3H3Q8IVL6 736 aa22.3■■□□□ 1.16
FARP2-201ENST00000264042 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
FARP2-201ENST00000264042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
FARP2-201ENST00000264042 ARID3CA6NKF2 412 aa22.23■■□□□ 1.15
FARP2-201ENST00000264042 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
FARP2-201ENST00000264042 TRIM26Q12899 539 aaPredicted RBP22.16■■□□□ 1.14
FARP2-201ENST00000264042 CSRNP3Q8WYN3 585 aa22.14■■□□□ 1.13
FARP2-201ENST00000264042 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
FARP2-201ENST00000264042 ABCC8Q09428 1581 aa22.11■■□□□ 1.13
FARP2-201ENST00000264042 FBLN2P98095 1184 aa22.05■■□□□ 1.12
FARP2-201ENST00000264042 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
FARP2-201ENST00000264042 SOGA1O94964 1423 aa21.99■■□□□ 1.11
FARP2-201ENST00000264042 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
FARP2-201ENST00000264042 HRCP23327 699 aa21.97■■□□□ 1.11
FARP2-201ENST00000264042 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
FARP2-201ENST00000264042 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
FARP2-201ENST00000264042 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
FARP2-201ENST00000264042 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
FARP2-201ENST00000264042 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.07
FARP2-201ENST00000264042 FAM50AQ14320 339 aaKnown RBP21.68■■□□□ 1.06
FARP2-201ENST00000264042 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
FARP2-201ENST00000264042 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
FARP2-201ENST00000264042 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
FARP2-201ENST00000264042 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
FARP2-201ENST00000264042 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
FARP2-201ENST00000264042 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
FARP2-201ENST00000264042 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
FARP2-201ENST00000264042 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
FARP2-201ENST00000264042 NEUROD1Q13562 356 aa21.43■■□□□ 1.02
FARP2-201ENST00000264042 NESP48681 1621 aa21.41■■□□□ 1.02
FARP2-201ENST00000264042 CLIP1P30622 1438 aa21.39■■□□□ 1.01
FARP2-201ENST00000264042 EIF4G1Q04637 1599 aaKnown RBP21.38■■□□□ 1.01
FARP2-201ENST00000264042 KANK4Q5T7N3 995 aaPredicted RBP21.34■■□□□ 1.01
FARP2-201ENST00000264042 CUX2O14529 1486 aa21.33■■□□□ 1.01
FARP2-201ENST00000264042 CHIC2Q9UKJ5 165 aa21.32■■□□□ 1
FARP2-201ENST00000264042 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
FARP2-201ENST00000264042 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
FARP2-201ENST00000264042 MYT1LQ9UL68 1186 aa21.26■□□□□ 0.99
FARP2-201ENST00000264042 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
FARP2-201ENST00000264042 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
FARP2-201ENST00000264042 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
FARP2-201ENST00000264042 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
FARP2-201ENST00000264042 HIRIP3Q9BW71 556 aaPredicted RBP21.2■□□□□ 0.98
FARP2-201ENST00000264042 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
FARP2-201ENST00000264042 POLR3GLQ9BT43 218 aa21.19■□□□□ 0.98
FARP2-201ENST00000264042 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
FARP2-201ENST00000264042 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
FARP2-201ENST00000264042 TNIKQ9UKE5 1360 aa21.17■□□□□ 0.98
FARP2-201ENST00000264042 CARMIL1Q5VZK9 1371 aa21.14■□□□□ 0.97
FARP2-201ENST00000264042 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
FARP2-201ENST00000264042 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
FARP2-201ENST00000264042 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
FARP2-201ENST00000264042 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
FARP2-201ENST00000264042 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
FARP2-201ENST00000264042 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
FARP2-201ENST00000264042 FANCD2Q9BXW9 1451 aa21.06■□□□□ 0.96
FARP2-201ENST00000264042 ZNF326Q5BKZ1 582 aaKnown RBP21.05■□□□□ 0.96
FARP2-201ENST00000264042 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
FARP2-201ENST00000264042 DIEXFQ68CQ4 756 aaKnown RBP21.03■□□□□ 0.96
FARP2-201ENST00000264042 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
FARP2-201ENST00000264042 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
FARP2-201ENST00000264042 EEA1Q15075 1411 aa20.93■□□□□ 0.94
FARP2-201ENST00000264042 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
FARP2-201ENST00000264042 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.946e-7■■■■□ 26.4
FARP2-201ENST00000264042 IGF1RP08069 1367 aa20.92■□□□□ 0.94
FARP2-201ENST00000264042 SIN3AQ96ST3 1273 aa20.91■□□□□ 0.94
FARP2-201ENST00000264042 CUX1P39880 1505 aa20.89■□□□□ 0.93
FARP2-201ENST00000264042 MTUS2Q5JR59 1369 aa20.88■□□□□ 0.93
FARP2-201ENST00000264042 CFTRP13569 1480 aa20.84■□□□□ 0.93
FARP2-201ENST00000264042 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms