RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 NISCHQ9Y2I1 1504 aa29.59■■■□□ 2.33
TTC39B-205ENST00000506891 CCDC180Q9P1Z9 1646 aa26.4■■□□□ 1.82
TTC39B-205ENST00000506891 ABCC9O60706 1549 aa26.08■■□□□ 1.77
TTC39B-205ENST00000506891 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
TTC39B-205ENST00000506891 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
TTC39B-205ENST00000506891 NACADO15069 1562 aa24.91■■□□□ 1.58
TTC39B-205ENST00000506891 MYO15BQ96JP2 1530 aa24.8■■□□□ 1.56
TTC39B-205ENST00000506891 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
TTC39B-205ENST00000506891 DCAF1Q9Y4B6 1507 aa24.6■■□□□ 1.53
TTC39B-205ENST00000506891 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
TTC39B-205ENST00000506891 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
TTC39B-205ENST00000506891 UNC13AQ9UPW8 1703 aa24.16■■□□□ 1.46
TTC39B-205ENST00000506891 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
TTC39B-205ENST00000506891 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
TTC39B-205ENST00000506891 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
TTC39B-205ENST00000506891 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
TTC39B-205ENST00000506891 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
TTC39B-205ENST00000506891 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
TTC39B-205ENST00000506891 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
TTC39B-205ENST00000506891 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
TTC39B-205ENST00000506891 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
TTC39B-205ENST00000506891 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
TTC39B-205ENST00000506891 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
TTC39B-205ENST00000506891 PEG3Q9GZU2 1588 aa22.83■■□□□ 1.25
TTC39B-205ENST00000506891 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
TTC39B-205ENST00000506891 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
TTC39B-205ENST00000506891 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
TTC39B-205ENST00000506891 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
TTC39B-205ENST00000506891 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
TTC39B-205ENST00000506891 NESP48681 1621 aa22.46■■□□□ 1.19
TTC39B-205ENST00000506891 CUX2O14529 1486 aa22.42■■□□□ 1.18
TTC39B-205ENST00000506891 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
TTC39B-205ENST00000506891 WIZO95785 1651 aa22.4■■□□□ 1.18
TTC39B-205ENST00000506891 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
TTC39B-205ENST00000506891 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
TTC39B-205ENST00000506891 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
TTC39B-205ENST00000506891 DNAJC5Q9H3Z4 198 aa22.2■■□□□ 1.14
TTC39B-205ENST00000506891 CFTRP13569 1480 aa22.16■■□□□ 1.14
TTC39B-205ENST00000506891 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.12
TTC39B-205ENST00000506891 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
TTC39B-205ENST00000506891 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
TTC39B-205ENST00000506891 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
TTC39B-205ENST00000506891 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
TTC39B-205ENST00000506891 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
TTC39B-205ENST00000506891 WDR62O43379 1518 aa21.95■■□□□ 1.1
TTC39B-205ENST00000506891 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
TTC39B-205ENST00000506891 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
TTC39B-205ENST00000506891 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
TTC39B-205ENST00000506891 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
TTC39B-205ENST00000506891 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
TTC39B-205ENST00000506891 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
TTC39B-205ENST00000506891 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
TTC39B-205ENST00000506891 DNMBPQ6XZF7 1577 aa21.55■■□□□ 1.04
TTC39B-205ENST00000506891 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
TTC39B-205ENST00000506891 SOGA1O94964 1423 aa21.46■■□□□ 1.03
TTC39B-205ENST00000506891 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
TTC39B-205ENST00000506891 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.02
TTC39B-205ENST00000506891 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
TTC39B-205ENST00000506891 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
TTC39B-205ENST00000506891 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
TTC39B-205ENST00000506891 CUX1P39880 1505 aa21.34■■□□□ 1.01
TTC39B-205ENST00000506891 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
TTC39B-205ENST00000506891 WDR97A6NE52 1622 aa21.33■■□□□ 1
TTC39B-205ENST00000506891 FBLN2P98095 1184 aa21.27■■□□□ 1
TTC39B-205ENST00000506891 EIF4G3O43432 1585 aaKnown RBP21.27■□□□□ 0.99
TTC39B-205ENST00000506891 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
TTC39B-205ENST00000506891 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
TTC39B-205ENST00000506891 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
TTC39B-205ENST00000506891 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
TTC39B-205ENST00000506891 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
TTC39B-205ENST00000506891 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
TTC39B-205ENST00000506891 BIVM-ERCC5R4GMW8 1640 aa21.16■□□□□ 0.98
TTC39B-205ENST00000506891 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.98
TTC39B-205ENST00000506891 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
TTC39B-205ENST00000506891 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
TTC39B-205ENST00000506891 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
TTC39B-205ENST00000506891 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
TTC39B-205ENST00000506891 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
TTC39B-205ENST00000506891 CYB5RLQ6IPT4 315 aa21.02■□□□□ 0.96
TTC39B-205ENST00000506891 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.96
TTC39B-205ENST00000506891 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
TTC39B-205ENST00000506891 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
TTC39B-205ENST00000506891 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
TTC39B-205ENST00000506891 CHD1O14646 1710 aa20.98■□□□□ 0.95
TTC39B-205ENST00000506891 PBRM1Q86U86 1689 aa20.94■□□□□ 0.94
TTC39B-205ENST00000506891 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
TTC39B-205ENST00000506891 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
TTC39B-205ENST00000506891 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
TTC39B-205ENST00000506891 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
TTC39B-205ENST00000506891 ARAP1Q96P48 1450 aa20.84■□□□□ 0.93
TTC39B-205ENST00000506891 NUP160Q12769 1436 aa20.83■□□□□ 0.93
TTC39B-205ENST00000506891 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
TTC39B-205ENST00000506891 IGF1RP08069 1367 aa20.82■□□□□ 0.92
TTC39B-205ENST00000506891 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
TTC39B-205ENST00000506891 JPH4Q96JJ6 628 aa20.76■□□□□ 0.91
TTC39B-205ENST00000506891 CEP170Q5SW79 1584 aa20.69■□□□□ 0.9
TTC39B-205ENST00000506891 CUL7Q14999 1698 aa20.68■□□□□ 0.9
TTC39B-205ENST00000506891 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
TTC39B-205ENST00000506891 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
TTC39B-205ENST00000506891 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms