RNA–Protein interactions for RNA: ENST00000505160.1

PACRGL-211, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-211ENST00000505160 NISCHQ9Y2I1 1504 aa44.12■■■■■ 4.65
PACRGL-211ENST00000505160 CCDC180Q9P1Z9 1646 aa39.48■■■■□ 3.91
PACRGL-211ENST00000505160 ABCC9O60706 1549 aa38.79■■■■□ 3.8
PACRGL-211ENST00000505160 RB1CC1Q8TDY2 1594 aa37.24■■■■□ 3.55
PACRGL-211ENST00000505160 NACADO15069 1562 aa37.12■■■■□ 3.53
PACRGL-211ENST00000505160 DCAF8L2P0C7V8 631 aa36.84■■■■□ 3.49
PACRGL-211ENST00000505160 MYO15BQ96JP2 1530 aa36.79■■■■□ 3.48
PACRGL-211ENST00000505160 ZCCHC6Q5VYS8 1495 aaKnown RBP36.72■■■■□ 3.47
PACRGL-211ENST00000505160 DCAF1Q9Y4B6 1507 aa36.52■■■■□ 3.44
PACRGL-211ENST00000505160 UNC13AQ9UPW8 1703 aa36.49■■■■□ 3.43
PACRGL-211ENST00000505160 BICRAQ9NZM4 1560 aa36.1■■■■□ 3.37
PACRGL-211ENST00000505160 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
PACRGL-211ENST00000505160 SCRIBQ14160 1630 aa35.94■■■■□ 3.34
PACRGL-211ENST00000505160 DNAJC5BQ9UF47 199 aa35.76■■■■□ 3.32
PACRGL-211ENST00000505160 SHROOM4Q9ULL8 1493 aa35.73■■■■□ 3.31
PACRGL-211ENST00000505160 EIF4G1Q04637 1599 aaKnown RBP35.18■■■■□ 3.22
PACRGL-211ENST00000505160 CC2D2AQ9P2K1 1620 aa35.12■■■■□ 3.21
PACRGL-211ENST00000505160 CECR2Q9BXF3 1484 aa34.89■■■■□ 3.18
PACRGL-211ENST00000505160 SMARCA4P51532 1647 aa34.35■■■■□ 3.09
PACRGL-211ENST00000505160 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
PACRGL-211ENST00000505160 NCAPD3P42695 1498 aa34.19■■■■□ 3.06
PACRGL-211ENST00000505160 SMARCA2P51531 1590 aa34.17■■■■□ 3.06
PACRGL-211ENST00000505160 ATAD2BQ9ULI0 1458 aa34.17■■■■□ 3.06
PACRGL-211ENST00000505160 HMGXB3Q12766 1538 aa34.08■■■■□ 3.05
PACRGL-211ENST00000505160 PEG3Q9GZU2 1588 aa34.02■■■■□ 3.04
PACRGL-211ENST00000505160 MROH2BQ7Z745 1585 aa33.98■■■■□ 3.03
PACRGL-211ENST00000505160 BAZ1BQ9UIG0 1483 aaKnown RBP33.9■■■■□ 3.02
PACRGL-211ENST00000505160 WIZO95785 1651 aa33.65■■■□□ 2.98
PACRGL-211ENST00000505160 NESP48681 1621 aa33.47■■■□□ 2.95
PACRGL-211ENST00000505160 ERCC6Q03468 1493 aa33.47■■■□□ 2.95
PACRGL-211ENST00000505160 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.95
PACRGL-211ENST00000505160 LAMC3Q9Y6N6 1575 aa33.41■■■□□ 2.94
PACRGL-211ENST00000505160 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
PACRGL-211ENST00000505160 CUX2O14529 1486 aa33.25■■■□□ 2.91
PACRGL-211ENST00000505160 KIF21AQ7Z4S6 1674 aa33.18■■■□□ 2.9
PACRGL-211ENST00000505160 CADPSQ9ULU8 1353 aa33.15■■■□□ 2.9
PACRGL-211ENST00000505160 THOC2Q8NI27 1593 aaKnown RBP33.13■■■□□ 2.89
PACRGL-211ENST00000505160 PDS5BQ9NTI5 1447 aa33.12■■■□□ 2.89
PACRGL-211ENST00000505160 CFTRP13569 1480 aa32.93■■■□□ 2.86
PACRGL-211ENST00000505160 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
PACRGL-211ENST00000505160 MRC2Q9UBG0 1479 aa32.84■■■□□ 2.85
PACRGL-211ENST00000505160 CEP164Q9UPV0 1460 aa32.83■■■□□ 2.85
PACRGL-211ENST00000505160 FANCD2Q9BXW9 1451 aa32.82■■■□□ 2.84
PACRGL-211ENST00000505160 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
PACRGL-211ENST00000505160 WDR62O43379 1518 aa32.77■■■□□ 2.84
PACRGL-211ENST00000505160 URB2Q14146 1524 aaKnown RBP32.51■■■□□ 2.8
PACRGL-211ENST00000505160 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
PACRGL-211ENST00000505160 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
PACRGL-211ENST00000505160 TOPBP1Q92547 1522 aa32.28■■■□□ 2.76
PACRGL-211ENST00000505160 ABCC8Q09428 1581 aa32.25■■■□□ 2.75
PACRGL-211ENST00000505160 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
PACRGL-211ENST00000505160 IFT140Q96RY7 1462 aa32.14■■■□□ 2.74
PACRGL-211ENST00000505160 ZNF608Q9ULD9 1512 aaPredicted RBP32■■■□□ 2.71
PACRGL-211ENST00000505160 POLA1P09884 1462 aaPredicted RBP31.97■■■□□ 2.71
PACRGL-211ENST00000505160 TARBP1Q13395 1621 aaKnown RBP31.97■■■□□ 2.71
PACRGL-211ENST00000505160 EIF4G3O43432 1585 aaKnown RBP31.95■■■□□ 2.71
PACRGL-211ENST00000505160 CUX1P39880 1505 aa31.92■■■□□ 2.7
PACRGL-211ENST00000505160 FGD5Q6ZNL6 1462 aa31.86■■■□□ 2.69
PACRGL-211ENST00000505160 RAD54L2Q9Y4B4 1467 aa31.8■■■□□ 2.68
PACRGL-211ENST00000505160 SOGA1O94964 1423 aa31.78■■■□□ 2.68
PACRGL-211ENST00000505160 AQRO60306 1485 aaKnown RBP eCLIP31.75■■■□□ 2.67
PACRGL-211ENST00000505160 WDR97A6NE52 1622 aa31.75■■■□□ 2.67
PACRGL-211ENST00000505160 OSCARQ8IYS5 282 aa31.69■■■□□ 2.66
PACRGL-211ENST00000505160 CHD1O14646 1710 aa31.64■■■□□ 2.66
PACRGL-211ENST00000505160 BIVM-ERCC5R4GMW8 1640 aa31.64■■■□□ 2.65
PACRGL-211ENST00000505160 TDRD9Q8NDG6 1382 aaKnown RBP31.62■■■□□ 2.65
PACRGL-211ENST00000505160 TOP2BQ02880 1626 aa31.6■■■□□ 2.65
PACRGL-211ENST00000505160 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
PACRGL-211ENST00000505160 SYNJ1O43426 1573 aa31.56■■■□□ 2.64
PACRGL-211ENST00000505160 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
PACRGL-211ENST00000505160 PBRM1Q86U86 1689 aa31.53■■■□□ 2.64
PACRGL-211ENST00000505160 SNAPC4Q5SXM2 1469 aa31.51■■■□□ 2.63
PACRGL-211ENST00000505160 ABCA5Q8WWZ7 1642 aa31.5■■■□□ 2.63
PACRGL-211ENST00000505160 GRIN2BQ13224 1484 aa31.49■■■□□ 2.63
PACRGL-211ENST00000505160 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
PACRGL-211ENST00000505160 GAPVD1Q14C86 1478 aa31.45■■■□□ 2.62
PACRGL-211ENST00000505160 FBLN2P98095 1184 aa31.38■■■□□ 2.61
PACRGL-211ENST00000505160 RIMBP3CA6NJZ7 1639 aa31.37■■■□□ 2.61
PACRGL-211ENST00000505160 RIMBP3BA6NNM3 1639 aa31.37■■■□□ 2.61
PACRGL-211ENST00000505160 RIMBP3Q9UFD9 1639 aa31.37■■■□□ 2.61
PACRGL-211ENST00000505160 SYNJ2O15056 1496 aa31.33■■■□□ 2.61
PACRGL-211ENST00000505160 ARHGEF11O15085 1522 aa31.3■■■□□ 2.6
PACRGL-211ENST00000505160 TRIM41Q8WV44 630 aa31.27■■■□□ 2.6
PACRGL-211ENST00000505160 CHMP7Q8WUX9 453 aaPredicted RBP31.26■■■□□ 2.59
PACRGL-211ENST00000505160 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
PACRGL-211ENST00000505160 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
PACRGL-211ENST00000505160 ERICH3Q5RHP9 1530 aa31.17■■■□□ 2.58
PACRGL-211ENST00000505160 GRIN2AQ12879 1464 aa31.11■■■□□ 2.57
PACRGL-211ENST00000505160 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.56
PACRGL-211ENST00000505160 ARAP1Q96P48 1450 aa31.01■■■□□ 2.56
PACRGL-211ENST00000505160 CEP170Q5SW79 1584 aa30.99■■■□□ 2.55
PACRGL-211ENST00000505160 NUP160Q12769 1436 aa30.97■■■□□ 2.55
PACRGL-211ENST00000505160 KIF27Q86VH2 1401 aa30.94■■■□□ 2.54
PACRGL-211ENST00000505160 CYB5RLQ6IPT4 315 aa30.91■■■□□ 2.54
PACRGL-211ENST00000505160 CUL7Q14999 1698 aa30.89■■■□□ 2.54
PACRGL-211ENST00000505160 SHROOM2Q13796 1616 aa30.84■■■□□ 2.53
PACRGL-211ENST00000505160 IGF1RP08069 1367 aa30.79■■■□□ 2.52
PACRGL-211ENST00000505160 RUSC2Q8N2Y8 1516 aa30.78■■■□□ 2.52
PACRGL-211ENST00000505160 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
PACRGL-211ENST00000505160 CARMIL1Q5VZK9 1371 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms