RNA–Protein interactions for RNA: ENST00000513590.5

PACRGL-228, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-228ENST00000513590 NISCHQ9Y2I1 1504 aa39.66■■■■□ 3.94
PACRGL-228ENST00000513590 ABCC9O60706 1549 aa36.93■■■■□ 3.5
PACRGL-228ENST00000513590 CCDC180Q9P1Z9 1646 aa35.94■■■■□ 3.34
PACRGL-228ENST00000513590 DNAJC5BQ9UF47 199 aa35.5■■■■□ 3.27
PACRGL-228ENST00000513590 RB1CC1Q8TDY2 1594 aa34.73■■■■□ 3.15
PACRGL-228ENST00000513590 PABPN1Q86U42 306 aaKnown RBP eCLIP34.28■■■■□ 3.08
PACRGL-228ENST00000513590 NACADO15069 1562 aa34.27■■■■□ 3.08
PACRGL-228ENST00000513590 DCAF8L2P0C7V8 631 aa34■■■■□ 3.03
PACRGL-228ENST00000513590 UNC13AQ9UPW8 1703 aa33.77■■■■□ 3
PACRGL-228ENST00000513590 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
PACRGL-228ENST00000513590 MYO15BQ96JP2 1530 aa33.5■■■□□ 2.95
PACRGL-228ENST00000513590 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
PACRGL-228ENST00000513590 DNAJC5Q9H3Z4 198 aa33.35■■■□□ 2.93
PACRGL-228ENST00000513590 CC2D2AQ9P2K1 1620 aa33.26■■■□□ 2.91
PACRGL-228ENST00000513590 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
PACRGL-228ENST00000513590 EIF4G1Q04637 1599 aaKnown RBP32.97■■■□□ 2.87
PACRGL-228ENST00000513590 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
PACRGL-228ENST00000513590 SCRIBQ14160 1630 aa32.69■■■□□ 2.82
PACRGL-228ENST00000513590 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
PACRGL-228ENST00000513590 CUX2O14529 1486 aa32.24■■■□□ 2.75
PACRGL-228ENST00000513590 ERCC6Q03468 1493 aa31.99■■■□□ 2.71
PACRGL-228ENST00000513590 NCAPD3P42695 1498 aa31.69■■■□□ 2.66
PACRGL-228ENST00000513590 TRIM41Q8WV44 630 aa31.49■■■□□ 2.63
PACRGL-228ENST00000513590 ATAD2BQ9ULI0 1458 aa31.43■■■□□ 2.62
PACRGL-228ENST00000513590 NESP48681 1621 aa31.42■■■□□ 2.62
PACRGL-228ENST00000513590 HMGXB3Q12766 1538 aa31.3■■■□□ 2.6
PACRGL-228ENST00000513590 SMARCA2P51531 1590 aa31.29■■■□□ 2.6
PACRGL-228ENST00000513590 THOC2Q8NI27 1593 aaKnown RBP31.24■■■□□ 2.59
PACRGL-228ENST00000513590 SMARCA4P51532 1647 aa31.09■■■□□ 2.57
PACRGL-228ENST00000513590 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
PACRGL-228ENST00000513590 LAMC3Q9Y6N6 1575 aa31.07■■■□□ 2.56
PACRGL-228ENST00000513590 PDS5BQ9NTI5 1447 aa31■■■□□ 2.55
PACRGL-228ENST00000513590 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
PACRGL-228ENST00000513590 BAZ1AQ9NRL2 1556 aaPredicted RBP30.86■■■□□ 2.53
PACRGL-228ENST00000513590 PEG3Q9GZU2 1588 aa30.82■■■□□ 2.52
PACRGL-228ENST00000513590 MRC2Q9UBG0 1479 aa30.75■■■□□ 2.51
PACRGL-228ENST00000513590 OSCARQ8IYS5 282 aa30.7■■■□□ 2.51
PACRGL-228ENST00000513590 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
PACRGL-228ENST00000513590 WDR62O43379 1518 aa30.66■■■□□ 2.5
PACRGL-228ENST00000513590 MROH2BQ7Z745 1585 aa30.53■■■□□ 2.48
PACRGL-228ENST00000513590 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
PACRGL-228ENST00000513590 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
PACRGL-228ENST00000513590 RIMBP3CA6NJZ7 1639 aa30.24■■■□□ 2.43
PACRGL-228ENST00000513590 RIMBP3BA6NNM3 1639 aa30.24■■■□□ 2.43
PACRGL-228ENST00000513590 RIMBP3Q9UFD9 1639 aa30.24■■■□□ 2.43
PACRGL-228ENST00000513590 CFTRP13569 1480 aa30.12■■■□□ 2.41
PACRGL-228ENST00000513590 ARHGEF11O15085 1522 aa30.09■■■□□ 2.41
PACRGL-228ENST00000513590 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
PACRGL-228ENST00000513590 WIZO95785 1651 aa30.07■■■□□ 2.4
PACRGL-228ENST00000513590 TRHP20396 242 aaPredicted RBP30.02■■■□□ 2.4
PACRGL-228ENST00000513590 CYB5RLQ6IPT4 315 aa30.02■■■□□ 2.4
PACRGL-228ENST00000513590 IFT140Q96RY7 1462 aa29.88■■■□□ 2.37
PACRGL-228ENST00000513590 ZNF608Q9ULD9 1512 aaPredicted RBP29.87■■■□□ 2.37
PACRGL-228ENST00000513590 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
PACRGL-228ENST00000513590 ARAP1Q96P48 1450 aa29.73■■■□□ 2.35
PACRGL-228ENST00000513590 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
PACRGL-228ENST00000513590 RSF1Q96T23 1441 aaPredicted RBP29.64■■■□□ 2.34
PACRGL-228ENST00000513590 TOPBP1Q92547 1522 aa29.61■■■□□ 2.33
PACRGL-228ENST00000513590 EIF4G3O43432 1585 aaKnown RBP29.61■■■□□ 2.33
PACRGL-228ENST00000513590 FBLN2P98095 1184 aa29.6■■■□□ 2.33
PACRGL-228ENST00000513590 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
PACRGL-228ENST00000513590 ABCC8Q09428 1581 aa29.55■■■□□ 2.32
PACRGL-228ENST00000513590 CHD1O14646 1710 aa29.53■■■□□ 2.32
PACRGL-228ENST00000513590 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.32
PACRGL-228ENST00000513590 DNMBPQ6XZF7 1577 aa29.4■■■□□ 2.3
PACRGL-228ENST00000513590 CCDC88BA6NC98 1476 aa29.37■■■□□ 2.29
PACRGL-228ENST00000513590 TARBP1Q13395 1621 aaKnown RBP29.37■■■□□ 2.29
PACRGL-228ENST00000513590 POLA1P09884 1462 aaPredicted RBP29.25■■■□□ 2.27
PACRGL-228ENST00000513590 CLASP1Q7Z460 1538 aa29.24■■■□□ 2.27
PACRGL-228ENST00000513590 CHMP7Q8WUX9 453 aaPredicted RBP29.23■■■□□ 2.27
PACRGL-228ENST00000513590 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
PACRGL-228ENST00000513590 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
PACRGL-228ENST00000513590 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
PACRGL-228ENST00000513590 RAD54L2Q9Y4B4 1467 aa29.17■■■□□ 2.26
PACRGL-228ENST00000513590 SOGA1O94964 1423 aa29.16■■■□□ 2.26
PACRGL-228ENST00000513590 MAGI1Q96QZ7 1491 aaPredicted RBP29.08■■■□□ 2.25
PACRGL-228ENST00000513590 GAPVD1Q14C86 1478 aa29.07■■■□□ 2.24
PACRGL-228ENST00000513590 WDR97A6NE52 1622 aa29.05■■■□□ 2.24
PACRGL-228ENST00000513590 SYNJ2O15056 1496 aa29■■■□□ 2.23
PACRGL-228ENST00000513590 GRIN2BQ13224 1484 aa28.99■■■□□ 2.23
PACRGL-228ENST00000513590 FGD5Q6ZNL6 1462 aa28.93■■■□□ 2.22
PACRGL-228ENST00000513590 CUX1P39880 1505 aa28.73■■■□□ 2.19
PACRGL-228ENST00000513590 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
PACRGL-228ENST00000513590 PBRM1Q86U86 1689 aa28.67■■■□□ 2.18
PACRGL-228ENST00000513590 ILDR1Q86SU0 546 aaPredicted RBP28.61■■■□□ 2.17
PACRGL-228ENST00000513590 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
PACRGL-228ENST00000513590 CEP170Q5SW79 1584 aa28.59■■■□□ 2.17
PACRGL-228ENST00000513590 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
PACRGL-228ENST00000513590 KIF13AQ9H1H9 1805 aa28.55■■■□□ 2.16
PACRGL-228ENST00000513590 NUP160Q12769 1436 aa28.54■■■□□ 2.16
PACRGL-228ENST00000513590 ABCA5Q8WWZ7 1642 aa28.54■■■□□ 2.16
PACRGL-228ENST00000513590 FAM69CQ0P6D2 419 aa28.5■■■□□ 2.15
PACRGL-228ENST00000513590 KDM4FA0A1W2PPD8 638 aa28.48■■■□□ 2.15
PACRGL-228ENST00000513590 SHROOM2Q13796 1616 aa28.46■■■□□ 2.15
PACRGL-228ENST00000513590 ABCC10Q5T3U5 1492 aa28.42■■■□□ 2.14
PACRGL-228ENST00000513590 NPM1P06748 294 aaKnown RBP eCLIP28.41■■■□□ 2.14
PACRGL-228ENST00000513590 ADAMTS12P58397 1594 aa28.41■■■□□ 2.14
PACRGL-228ENST00000513590 FHAD1B1AJZ9 1412 aa28.38■■■□□ 2.13
PACRGL-228ENST00000513590 PRG4Q92954 1404 aaPredicted RBP28.38■■■□□ 2.13
PACRGL-228ENST00000513590 JPH4Q96JJ6 628 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms