RNA–Protein interactions for RNA: ENST00000510051.5

PACRGL-223, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-223ENST00000510051 NISCHQ9Y2I1 1504 aa47.44■■■■■ 5.18
PACRGL-223ENST00000510051 CCDC180Q9P1Z9 1646 aa42.31■■■■■ 4.36
PACRGL-223ENST00000510051 ABCC9O60706 1549 aa42.03■■■■■ 4.32
PACRGL-223ENST00000510051 RB1CC1Q8TDY2 1594 aa40.13■■■■■ 4.01
PACRGL-223ENST00000510051 DCAF8L2P0C7V8 631 aa40.09■■■■■ 4.01
PACRGL-223ENST00000510051 NACADO15069 1562 aa39.95■■■■□ 3.99
PACRGL-223ENST00000510051 MYO15BQ96JP2 1530 aa39.49■■■■□ 3.91
PACRGL-223ENST00000510051 ZCCHC6Q5VYS8 1495 aaKnown RBP39.37■■■■□ 3.89
PACRGL-223ENST00000510051 PABPN1Q86U42 306 aaKnown RBP eCLIP39.27■■■■□ 3.88
PACRGL-223ENST00000510051 UNC13AQ9UPW8 1703 aa39.16■■■■□ 3.86
PACRGL-223ENST00000510051 DCAF1Q9Y4B6 1507 aa39.15■■■■□ 3.86
PACRGL-223ENST00000510051 DNAJC5BQ9UF47 199 aa39.05■■■■□ 3.84
PACRGL-223ENST00000510051 BICRAQ9NZM4 1560 aa38.91■■■■□ 3.82
PACRGL-223ENST00000510051 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
PACRGL-223ENST00000510051 SHROOM4Q9ULL8 1493 aa38.4■■■■□ 3.74
PACRGL-223ENST00000510051 EIF4G1Q04637 1599 aaKnown RBP37.94■■■■□ 3.66
PACRGL-223ENST00000510051 CC2D2AQ9P2K1 1620 aa37.93■■■■□ 3.66
PACRGL-223ENST00000510051 CECR2Q9BXF3 1484 aa37.79■■■■□ 3.64
PACRGL-223ENST00000510051 SMARCA4P51532 1647 aa36.89■■■■□ 3.5
PACRGL-223ENST00000510051 NCAPD3P42695 1498 aa36.88■■■■□ 3.5
PACRGL-223ENST00000510051 ATAD2BQ9ULI0 1458 aa36.85■■■■□ 3.49
PACRGL-223ENST00000510051 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
PACRGL-223ENST00000510051 SMARCA2P51531 1590 aa36.76■■■■□ 3.48
PACRGL-223ENST00000510051 HMGXB3Q12766 1538 aa36.62■■■■□ 3.45
PACRGL-223ENST00000510051 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.44
PACRGL-223ENST00000510051 BAZ1BQ9UIG0 1483 aaKnown RBP36.54■■■■□ 3.44
PACRGL-223ENST00000510051 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
PACRGL-223ENST00000510051 ERCC6Q03468 1493 aa36.28■■■■□ 3.4
PACRGL-223ENST00000510051 NESP48681 1621 aa36.2■■■■□ 3.39
PACRGL-223ENST00000510051 WIZO95785 1651 aa36.15■■■■□ 3.38
PACRGL-223ENST00000510051 RSF1Q96T23 1441 aaPredicted RBP35.99■■■■□ 3.35
PACRGL-223ENST00000510051 CUX2O14529 1486 aa35.98■■■■□ 3.35
PACRGL-223ENST00000510051 LAMC3Q9Y6N6 1575 aa35.98■■■■□ 3.35
PACRGL-223ENST00000510051 CADPSQ9ULU8 1353 aa35.83■■■■□ 3.33
PACRGL-223ENST00000510051 PDS5BQ9NTI5 1447 aa35.82■■■■□ 3.32
PACRGL-223ENST00000510051 TOP2AP11388 1531 aaKnown RBP35.71■■■■□ 3.31
PACRGL-223ENST00000510051 KIF21AQ7Z4S6 1674 aa35.71■■■■□ 3.31
PACRGL-223ENST00000510051 THOC2Q8NI27 1593 aaKnown RBP35.67■■■■□ 3.3
PACRGL-223ENST00000510051 DNAJC5Q9H3Z4 198 aa35.54■■■■□ 3.28
PACRGL-223ENST00000510051 CFTRP13569 1480 aa35.48■■■■□ 3.27
PACRGL-223ENST00000510051 MRC2Q9UBG0 1479 aa35.45■■■■□ 3.27
PACRGL-223ENST00000510051 FANCD2Q9BXW9 1451 aa35.41■■■■□ 3.26
PACRGL-223ENST00000510051 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
PACRGL-223ENST00000510051 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
PACRGL-223ENST00000510051 WDR62O43379 1518 aa35.31■■■■□ 3.24
PACRGL-223ENST00000510051 PRDM2Q13029 1718 aa35.08■■■■□ 3.21
PACRGL-223ENST00000510051 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
PACRGL-223ENST00000510051 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
PACRGL-223ENST00000510051 TOPBP1Q92547 1522 aa34.77■■■■□ 3.16
PACRGL-223ENST00000510051 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
PACRGL-223ENST00000510051 IFT140Q96RY7 1462 aa34.68■■■■□ 3.14
PACRGL-223ENST00000510051 DNMBPQ6XZF7 1577 aa34.67■■■■□ 3.14
PACRGL-223ENST00000510051 ZNF608Q9ULD9 1512 aaPredicted RBP34.59■■■■□ 3.13
PACRGL-223ENST00000510051 OSCARQ8IYS5 282 aa34.52■■■■□ 3.12
PACRGL-223ENST00000510051 POLA1P09884 1462 aaPredicted RBP34.45■■■■□ 3.1
PACRGL-223ENST00000510051 TARBP1Q13395 1621 aaKnown RBP34.39■■■■□ 3.1
PACRGL-223ENST00000510051 EIF4G3O43432 1585 aaKnown RBP34.37■■■■□ 3.09
PACRGL-223ENST00000510051 AQRO60306 1485 aaKnown RBP eCLIP34.37■■■■□ 3.09
PACRGL-223ENST00000510051 RAD54L2Q9Y4B4 1467 aa34.36■■■■□ 3.09
PACRGL-223ENST00000510051 SOGA1O94964 1423 aa34.36■■■■□ 3.09
PACRGL-223ENST00000510051 CUX1P39880 1505 aa34.32■■■■□ 3.08
PACRGL-223ENST00000510051 FGD5Q6ZNL6 1462 aa34.31■■■■□ 3.08
PACRGL-223ENST00000510051 TRIM41Q8WV44 630 aa34.27■■■■□ 3.08
PACRGL-223ENST00000510051 TDRD9Q8NDG6 1382 aaKnown RBP34.24■■■■□ 3.07
PACRGL-223ENST00000510051 FBLN2P98095 1184 aa34.17■■■■□ 3.06
PACRGL-223ENST00000510051 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
PACRGL-223ENST00000510051 CHD1O14646 1710 aa34.04■■■■□ 3.04
PACRGL-223ENST00000510051 SNAPC4Q5SXM2 1469 aa34.01■■■■□ 3.03
PACRGL-223ENST00000510051 GRIN2BQ13224 1484 aa33.97■■■■□ 3.03
PACRGL-223ENST00000510051 WRNQ14191 1432 aaPredicted RBP eCLIP33.96■■■■□ 3.03
PACRGL-223ENST00000510051 CHMP7Q8WUX9 453 aaPredicted RBP33.95■■■■□ 3.03
PACRGL-223ENST00000510051 GAPVD1Q14C86 1478 aa33.92■■■■□ 3.02
PACRGL-223ENST00000510051 ABCA10Q8WWZ4 1543 aa33.92■■■■□ 3.02
PACRGL-223ENST00000510051 RIMBP3CA6NJZ7 1639 aa33.92■■■■□ 3.02
PACRGL-223ENST00000510051 RIMBP3BA6NNM3 1639 aa33.92■■■■□ 3.02
PACRGL-223ENST00000510051 RIMBP3Q9UFD9 1639 aa33.92■■■■□ 3.02
PACRGL-223ENST00000510051 MAGI1Q96QZ7 1491 aaPredicted RBP33.9■■■■□ 3.02
PACRGL-223ENST00000510051 TOP2BQ02880 1626 aa33.87■■■■□ 3.01
PACRGL-223ENST00000510051 ARHGEF11O15085 1522 aa33.87■■■■□ 3.01
PACRGL-223ENST00000510051 SYNJ1O43426 1573 aa33.86■■■■□ 3.01
PACRGL-223ENST00000510051 BIVM-ERCC5R4GMW8 1640 aa33.85■■■■□ 3.01
PACRGL-223ENST00000510051 PBRM1Q86U86 1689 aa33.81■■■■□ 3
PACRGL-223ENST00000510051 SYNJ2O15056 1496 aa33.8■■■■□ 3
PACRGL-223ENST00000510051 ABCA5Q8WWZ7 1642 aa33.79■■■■□ 3
PACRGL-223ENST00000510051 CYB5RLQ6IPT4 315 aa33.72■■■□□ 2.99
PACRGL-223ENST00000510051 CLASP1Q7Z460 1538 aa33.64■■■□□ 2.98
PACRGL-223ENST00000510051 ARAP1Q96P48 1450 aa33.56■■■□□ 2.96
PACRGL-223ENST00000510051 ADAMTS12P58397 1594 aa33.52■■■□□ 2.96
PACRGL-223ENST00000510051 GRIN2AQ12879 1464 aa33.52■■■□□ 2.96
PACRGL-223ENST00000510051 FHAD1B1AJZ9 1412 aa33.5■■■□□ 2.95
PACRGL-223ENST00000510051 ERICH3Q5RHP9 1530 aa33.49■■■□□ 2.95
PACRGL-223ENST00000510051 NUP160Q12769 1436 aa33.37■■■□□ 2.93
PACRGL-223ENST00000510051 CEP170Q5SW79 1584 aa33.36■■■□□ 2.93
PACRGL-223ENST00000510051 KIF27Q86VH2 1401 aa33.3■■■□□ 2.92
PACRGL-223ENST00000510051 TRHP20396 242 aaPredicted RBP33.25■■■□□ 2.91
PACRGL-223ENST00000510051 IGF1RP08069 1367 aa33.23■■■□□ 2.91
PACRGL-223ENST00000510051 ERCC6L2Q5T890 1561 aa33.2■■■□□ 2.91
PACRGL-223ENST00000510051 JPH4Q96JJ6 628 aa33.14■■■□□ 2.9
PACRGL-223ENST00000510051 SHROOM2Q13796 1616 aa33.13■■■□□ 2.89
PACRGL-223ENST00000510051 CUL7Q14999 1698 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms