RNA–Protein interactions for RNA: ENST00000429644.6

GBE1-201, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GBE1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-201ENST00000429644 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
GBE1-201ENST00000429644 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
GBE1-201ENST00000429644 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
GBE1-201ENST00000429644 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
GBE1-201ENST00000429644 EHMT2Q96KQ7 1210 aa20.39■□□□□ 0.85
GBE1-201ENST00000429644 PCGF6Q9BYE7 350 aa20.33■□□□□ 0.84
GBE1-201ENST00000429644 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
GBE1-201ENST00000429644 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
GBE1-201ENST00000429644 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
GBE1-201ENST00000429644 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
GBE1-201ENST00000429644 ZCCHC6Q5VYS8 1495 aaKnown RBP19.89■□□□□ 0.77
GBE1-201ENST00000429644 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
GBE1-201ENST00000429644 HRCP23327 699 aa19.82■□□□□ 0.76
GBE1-201ENST00000429644 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
GBE1-201ENST00000429644 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
GBE1-201ENST00000429644 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
GBE1-201ENST00000429644 TRIM26Q12899 539 aaPredicted RBP19.39■□□□□ 0.69
GBE1-201ENST00000429644 ABCC9O60706 1549 aa19.32■□□□□ 0.68
GBE1-201ENST00000429644 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
GBE1-201ENST00000429644 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
GBE1-201ENST00000429644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.08■□□□□ 0.64
GBE1-201ENST00000429644 CCER1Q8TC90 406 aaPredicted RBP19.07■□□□□ 0.64
GBE1-201ENST00000429644 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
GBE1-201ENST00000429644 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
GBE1-201ENST00000429644 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
GBE1-201ENST00000429644 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
GBE1-201ENST00000429644 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
GBE1-201ENST00000429644 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
GBE1-201ENST00000429644 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
GBE1-201ENST00000429644 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
GBE1-201ENST00000429644 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
GBE1-201ENST00000429644 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
GBE1-201ENST00000429644 APLP2Q06481 763 aa18.62■□□□□ 0.57
GBE1-201ENST00000429644 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
GBE1-201ENST00000429644 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
GBE1-201ENST00000429644 CSRNP3Q8WYN3 585 aa18.48■□□□□ 0.55
GBE1-201ENST00000429644 WIZO95785 1651 aa18.47■□□□□ 0.55
GBE1-201ENST00000429644 ITGAEP38570 1179 aa18.44■□□□□ 0.54
GBE1-201ENST00000429644 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
GBE1-201ENST00000429644 SOGA1O94964 1423 aa18.39■□□□□ 0.53
GBE1-201ENST00000429644 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
GBE1-201ENST00000429644 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
GBE1-201ENST00000429644 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
GBE1-201ENST00000429644 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
GBE1-201ENST00000429644 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
GBE1-201ENST00000429644 NACADO15069 1562 aa18.33■□□□□ 0.53
GBE1-201ENST00000429644 CEP162Q5TB80 1403 aa18.29■□□□□ 0.52
GBE1-201ENST00000429644 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
GBE1-201ENST00000429644 ACIN1Q9UKV3 1341 aaKnown RBP18.24■□□□□ 0.51
GBE1-201ENST00000429644 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
GBE1-201ENST00000429644 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
GBE1-201ENST00000429644 MIER1Q8N108 512 aa18.09■□□□□ 0.49
GBE1-201ENST00000429644 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
GBE1-201ENST00000429644 P3H3Q8IVL6 736 aa18.06■□□□□ 0.48
GBE1-201ENST00000429644 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
GBE1-201ENST00000429644 CLIP1P30622 1438 aa18.02■□□□□ 0.48
GBE1-201ENST00000429644 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
GBE1-201ENST00000429644 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
GBE1-201ENST00000429644 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
GBE1-201ENST00000429644 FAM50AQ14320 339 aaKnown RBP17.93■□□□□ 0.46
GBE1-201ENST00000429644 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
GBE1-201ENST00000429644 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
GBE1-201ENST00000429644 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
GBE1-201ENST00000429644 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
GBE1-201ENST00000429644 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
GBE1-201ENST00000429644 EEA1Q15075 1411 aa17.81■□□□□ 0.44
GBE1-201ENST00000429644 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
GBE1-201ENST00000429644 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
GBE1-201ENST00000429644 BCANQ96GW7 911 aa17.79■□□□□ 0.44
GBE1-201ENST00000429644 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
GBE1-201ENST00000429644 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
GBE1-201ENST00000429644 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
GBE1-201ENST00000429644 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
GBE1-201ENST00000429644 DDX10Q13206 875 aaKnown RBP17.66■□□□□ 0.42
GBE1-201ENST00000429644 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
GBE1-201ENST00000429644 SIN3AQ96ST3 1273 aa17.65■□□□□ 0.42
GBE1-201ENST00000429644 KCNH8Q96L42 1107 aa17.6■□□□□ 0.41
GBE1-201ENST00000429644 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.4
GBE1-201ENST00000429644 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
GBE1-201ENST00000429644 KIF27Q86VH2 1401 aa17.52■□□□□ 0.39
GBE1-201ENST00000429644 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
GBE1-201ENST00000429644 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
GBE1-201ENST00000429644 CHIC2Q9UKJ5 165 aa17.49■□□□□ 0.39
GBE1-201ENST00000429644 POLR3GLQ9BT43 218 aa17.49■□□□□ 0.39
GBE1-201ENST00000429644 DHX57Q6P158 1386 aaKnown RBP17.48■□□□□ 0.39
GBE1-201ENST00000429644 CUX2O14529 1486 aa17.47■□□□□ 0.39
GBE1-201ENST00000429644 KIF21BO75037 1637 aa17.47■□□□□ 0.39
GBE1-201ENST00000429644 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
GBE1-201ENST00000429644 NEFLP07196 543 aa17.43■□□□□ 0.38
GBE1-201ENST00000429644 FKBP8Q14318 412 aa17.42■□□□□ 0.38
GBE1-201ENST00000429644 ARAP1Q96P48 1450 aa17.4■□□□□ 0.38
GBE1-201ENST00000429644 CARMIL1Q5VZK9 1371 aa17.39■□□□□ 0.37
GBE1-201ENST00000429644 RAB3GAP2Q9H2M9 1393 aa17.39■□□□□ 0.37
GBE1-201ENST00000429644 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
GBE1-201ENST00000429644 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
GBE1-201ENST00000429644 RRP7BPQ9NSQ0 103 aa17.37■□□□□ 0.37
GBE1-201ENST00000429644 ANP32CO43423 234 aa17.35■□□□□ 0.37
GBE1-201ENST00000429644 IRX6P78412 446 aaPredicted RBP17.34■□□□□ 0.37
GBE1-201ENST00000429644 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
GBE1-201ENST00000429644 IGF1RP08069 1367 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms