RNA–Protein interactions for RNA: ENST00000268043.8

PIF1-201, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIF1, Length 2,687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-201ENST00000268043 NISCHQ9Y2I1 1504 aa37.3■■■■□ 3.56
PIF1-201ENST00000268043 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
PIF1-201ENST00000268043 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.63
PIF1-201ENST00000268043 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
PIF1-201ENST00000268043 SUPT5HO00267 1087 aaKnown RBP31.47■■■□□ 2.63
PIF1-201ENST00000268043 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
PIF1-201ENST00000268043 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
PIF1-201ENST00000268043 DCAF1Q9Y4B6 1507 aa30.35■■■□□ 2.45
PIF1-201ENST00000268043 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
PIF1-201ENST00000268043 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
PIF1-201ENST00000268043 ABCC9O60706 1549 aa29.82■■■□□ 2.36
PIF1-201ENST00000268043 LOC105371045A0A1W2PR82 267 aa29.68■■■□□ 2.34
PIF1-201ENST00000268043 RSF1Q96T23 1441 aaPredicted RBP29.59■■■□□ 2.33
PIF1-201ENST00000268043 PCGF6Q9BYE7 350 aa29.42■■■□□ 2.3
PIF1-201ENST00000268043 CECR2Q9BXF3 1484 aa29.35■■■□□ 2.29
PIF1-201ENST00000268043 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
PIF1-201ENST00000268043 NACADO15069 1562 aa29.24■■■□□ 2.27
PIF1-201ENST00000268043 FAM9AQ8IZU1 332 aaPredicted RBP29.17■■■□□ 2.26
PIF1-201ENST00000268043 EHMT2Q96KQ7 1210 aa29.15■■■□□ 2.26
PIF1-201ENST00000268043 MROH2BQ7Z745 1585 aa29.14■■■□□ 2.26
PIF1-201ENST00000268043 TRIM41Q8WV44 630 aa29.14■■■□□ 2.25
PIF1-201ENST00000268043 HRCP23327 699 aa29.13■■■□□ 2.25
PIF1-201ENST00000268043 WIZO95785 1651 aa28.95■■■□□ 2.23
PIF1-201ENST00000268043 PPARGC1BQ86YN6 1023 aaKnown RBP28.92■■■□□ 2.22
PIF1-201ENST00000268043 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
PIF1-201ENST00000268043 TRIM26Q12899 539 aaPredicted RBP28.63■■■□□ 2.17
PIF1-201ENST00000268043 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
PIF1-201ENST00000268043 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
PIF1-201ENST00000268043 SMARCA4P51532 1647 aa28.41■■■□□ 2.14
PIF1-201ENST00000268043 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
PIF1-201ENST00000268043 CCDC88BA6NC98 1476 aa28.37■■■□□ 2.13
PIF1-201ENST00000268043 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
PIF1-201ENST00000268043 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
PIF1-201ENST00000268043 SMARCA2P51531 1590 aa28.25■■■□□ 2.11
PIF1-201ENST00000268043 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
PIF1-201ENST00000268043 TTBK1Q5TCY1 1321 aaPredicted RBP28.12■■■□□ 2.09
PIF1-201ENST00000268043 SOGA1O94964 1423 aa28.11■■■□□ 2.09
PIF1-201ENST00000268043 RUSC2Q8N2Y8 1516 aa28.03■■■□□ 2.08
PIF1-201ENST00000268043 UBTFP17480 764 aaKnown RBP27.82■■■□□ 2.04
PIF1-201ENST00000268043 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
PIF1-201ENST00000268043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.81■■■□□ 2.04
PIF1-201ENST00000268043 CEP162Q5TB80 1403 aa27.8■■■□□ 2.04
PIF1-201ENST00000268043 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
PIF1-201ENST00000268043 WRNQ14191 1432 aaPredicted RBP eCLIP27.77■■■□□ 2.04
PIF1-201ENST00000268043 ZEB1P37275 1124 aaPredicted RBP27.73■■■□□ 2.03
PIF1-201ENST00000268043 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
PIF1-201ENST00000268043 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
PIF1-201ENST00000268043 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
PIF1-201ENST00000268043 TNIKQ9UKE5 1360 aa27.65■■■□□ 2.02
PIF1-201ENST00000268043 RANGAP1P46060 587 aaPredicted RBP27.62■■■□□ 2.01
PIF1-201ENST00000268043 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
PIF1-201ENST00000268043 EEA1Q15075 1411 aa27.53■■■□□ 2
PIF1-201ENST00000268043 GOLGA3Q08378 1498 aa27.51■■□□□ 1.99
PIF1-201ENST00000268043 RAPGEF2Q9Y4G8 1499 aa27.37■■□□□ 1.97
PIF1-201ENST00000268043 CEP164Q9UPV0 1460 aa27.34■■□□□ 1.97
PIF1-201ENST00000268043 CLIP1P30622 1438 aa27.29■■□□□ 1.96
PIF1-201ENST00000268043 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
PIF1-201ENST00000268043 KIF21BO75037 1637 aa27.22■■□□□ 1.95
PIF1-201ENST00000268043 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
PIF1-201ENST00000268043 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
PIF1-201ENST00000268043 CUX1P39880 1505 aa27.1■■□□□ 1.93
PIF1-201ENST00000268043 VPS8Q8N3P4 1428 aa27.09■■□□□ 1.93
PIF1-201ENST00000268043 HMGXB3Q12766 1538 aa27.07■■□□□ 1.92
PIF1-201ENST00000268043 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
PIF1-201ENST00000268043 APLP2Q06481 763 aa27.01■■□□□ 1.91
PIF1-201ENST00000268043 CFTRP13569 1480 aa26.97■■□□□ 1.91
PIF1-201ENST00000268043 PRXQ9BXM0 1461 aa26.96■■□□□ 1.91
PIF1-201ENST00000268043 KANK4Q5T7N3 995 aaPredicted RBP26.92■■□□□ 1.9
PIF1-201ENST00000268043 DIEXFQ68CQ4 756 aaKnown RBP26.91■■□□□ 1.9
PIF1-201ENST00000268043 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
PIF1-201ENST00000268043 ARAP1Q96P48 1450 aa26.88■■□□□ 1.89
PIF1-201ENST00000268043 KIF27Q86VH2 1401 aa26.86■■□□□ 1.89
PIF1-201ENST00000268043 PELP1Q8IZL8 1130 aaKnown RBP26.83■■□□□ 1.88
PIF1-201ENST00000268043 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
PIF1-201ENST00000268043 CUX2O14529 1486 aa26.76■■□□□ 1.87
PIF1-201ENST00000268043 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
PIF1-201ENST00000268043 NEUROD1Q13562 356 aa26.69■■□□□ 1.86
PIF1-201ENST00000268043 IGF1RP08069 1367 aa26.69■■□□□ 1.86
PIF1-201ENST00000268043 ZNF316A6NFI3 1004 aaPredicted RBP26.68■■□□□ 1.86
PIF1-201ENST00000268043 ARHGAP35Q9NRY4 1499 aa26.67■■□□□ 1.86
PIF1-201ENST00000268043 CC2D2AQ9P2K1 1620 aa26.66■■□□□ 1.86
PIF1-201ENST00000268043 ITGAEP38570 1179 aa26.65■■□□□ 1.86
PIF1-201ENST00000268043 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.86
PIF1-201ENST00000268043 P3H3Q8IVL6 736 aa26.61■■□□□ 1.85
PIF1-201ENST00000268043 NESP48681 1621 aa26.57■■□□□ 1.84
PIF1-201ENST00000268043 CARMIL1Q5VZK9 1371 aa26.55■■□□□ 1.84
PIF1-201ENST00000268043 ACIN1Q9UKV3 1341 aaKnown RBP26.55■■□□□ 1.84
PIF1-201ENST00000268043 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
PIF1-201ENST00000268043 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
PIF1-201ENST00000268043 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
PIF1-201ENST00000268043 YTHDC1Q96MU7 727 aaKnown RBP26.52■■□□□ 1.84
PIF1-201ENST00000268043 DHX57Q6P158 1386 aaKnown RBP26.47■■□□□ 1.83
PIF1-201ENST00000268043 ATP1B4Q9UN42 357 aaPredicted RBP26.47■■□□□ 1.83
PIF1-201ENST00000268043 MIER1Q8N108 512 aa26.46■■□□□ 1.83
PIF1-201ENST00000268043 PRDM2Q13029 1718 aa26.45■■□□□ 1.82
PIF1-201ENST00000268043 RRBP1Q9P2E9 1410 aaKnown RBP26.4■■□□□ 1.82
PIF1-201ENST00000268043 CCNB3Q8WWL7 1395 aa26.39■■□□□ 1.82
PIF1-201ENST00000268043 GTF3C3Q9Y5Q9 886 aa26.36■■□□□ 1.81
PIF1-201ENST00000268043 POLA1P09884 1462 aaPredicted RBP26.33■■□□□ 1.81
PIF1-201ENST00000268043 TOPBP1Q92547 1522 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms