RNA–Protein interactions for RNA: ENST00000559239.1

PIF1-205, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIF1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-205ENST00000559239 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
PIF1-205ENST00000559239 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
PIF1-205ENST00000559239 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
PIF1-205ENST00000559239 ZCCHC6Q5VYS8 1495 aaKnown RBP33.01■■■□□ 2.88
PIF1-205ENST00000559239 DCAF8L2P0C7V8 631 aa32.73■■■□□ 2.83
PIF1-205ENST00000559239 SUPT5HO00267 1087 aaKnown RBP32.55■■■□□ 2.8
PIF1-205ENST00000559239 DCAF1Q9Y4B6 1507 aa31.97■■■□□ 2.71
PIF1-205ENST00000559239 CHIC1Q5VXU3 224 aa31.42■■■□□ 2.62
PIF1-205ENST00000559239 SCRIBQ14160 1630 aa31.34■■■□□ 2.61
PIF1-205ENST00000559239 ABCC9O60706 1549 aa31.29■■■□□ 2.6
PIF1-205ENST00000559239 MYO15BQ96JP2 1530 aa31.28■■■□□ 2.6
PIF1-205ENST00000559239 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
PIF1-205ENST00000559239 NACADO15069 1562 aa30.86■■■□□ 2.53
PIF1-205ENST00000559239 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
PIF1-205ENST00000559239 LOC105371045A0A1W2PR82 267 aa30.58■■■□□ 2.49
PIF1-205ENST00000559239 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
PIF1-205ENST00000559239 MROH2BQ7Z745 1585 aa30.46■■■□□ 2.47
PIF1-205ENST00000559239 WIZO95785 1651 aa30.29■■■□□ 2.44
PIF1-205ENST00000559239 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
PIF1-205ENST00000559239 PCGF6Q9BYE7 350 aa30.21■■■□□ 2.43
PIF1-205ENST00000559239 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
PIF1-205ENST00000559239 UNC13AQ9UPW8 1703 aa30.06■■■□□ 2.4
PIF1-205ENST00000559239 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
PIF1-205ENST00000559239 EHMT2Q96KQ7 1210 aa29.98■■■□□ 2.39
PIF1-205ENST00000559239 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
PIF1-205ENST00000559239 HRCP23327 699 aa29.9■■■□□ 2.38
PIF1-205ENST00000559239 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
PIF1-205ENST00000559239 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
PIF1-205ENST00000559239 BICRAQ9NZM4 1560 aa29.71■■■□□ 2.35
PIF1-205ENST00000559239 EIF4G1Q04637 1599 aaKnown RBP29.68■■■□□ 2.34
PIF1-205ENST00000559239 CCDC88BA6NC98 1476 aa29.66■■■□□ 2.34
PIF1-205ENST00000559239 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
PIF1-205ENST00000559239 TRIM26Q12899 539 aaPredicted RBP29.58■■■□□ 2.33
PIF1-205ENST00000559239 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
PIF1-205ENST00000559239 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
PIF1-205ENST00000559239 SOGA1O94964 1423 aa29.21■■■□□ 2.27
PIF1-205ENST00000559239 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
PIF1-205ENST00000559239 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
PIF1-205ENST00000559239 RUSC2Q8N2Y8 1516 aa29.11■■■□□ 2.25
PIF1-205ENST00000559239 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
PIF1-205ENST00000559239 WRNQ14191 1432 aaPredicted RBP eCLIP29.01■■■□□ 2.23
PIF1-205ENST00000559239 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
PIF1-205ENST00000559239 TTBK1Q5TCY1 1321 aaPredicted RBP28.92■■■□□ 2.22
PIF1-205ENST00000559239 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
PIF1-205ENST00000559239 CEP162Q5TB80 1403 aa28.89■■■□□ 2.22
PIF1-205ENST00000559239 UBTFP17480 764 aaKnown RBP28.89■■■□□ 2.22
PIF1-205ENST00000559239 EEA1Q15075 1411 aa28.82■■■□□ 2.2
PIF1-205ENST00000559239 TNIKQ9UKE5 1360 aa28.8■■■□□ 2.2
PIF1-205ENST00000559239 GOLGA3Q08378 1498 aa28.7■■■□□ 2.18
PIF1-205ENST00000559239 ZEB1P37275 1124 aaPredicted RBP28.68■■■□□ 2.18
PIF1-205ENST00000559239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
PIF1-205ENST00000559239 NCAPD3P42695 1498 aa28.6■■■□□ 2.17
PIF1-205ENST00000559239 CEP164Q9UPV0 1460 aa28.55■■■□□ 2.16
PIF1-205ENST00000559239 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
PIF1-205ENST00000559239 RANGAP1P46060 587 aaPredicted RBP28.54■■■□□ 2.16
PIF1-205ENST00000559239 TOP2BQ02880 1626 aa28.5■■■□□ 2.15
PIF1-205ENST00000559239 RAPGEF2Q9Y4G8 1499 aa28.49■■■□□ 2.15
PIF1-205ENST00000559239 KIF21BO75037 1637 aa28.49■■■□□ 2.15
PIF1-205ENST00000559239 CCER1Q8TC90 406 aaPredicted RBP28.44■■■□□ 2.14
PIF1-205ENST00000559239 CLIP1P30622 1438 aa28.41■■■□□ 2.14
PIF1-205ENST00000559239 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
PIF1-205ENST00000559239 CUX1P39880 1505 aa28.36■■■□□ 2.13
PIF1-205ENST00000559239 CFTRP13569 1480 aa28.32■■■□□ 2.12
PIF1-205ENST00000559239 VPS8Q8N3P4 1428 aa28.21■■■□□ 2.11
PIF1-205ENST00000559239 PRXQ9BXM0 1461 aa28.16■■■□□ 2.1
PIF1-205ENST00000559239 HNRNPUL2Q1KMD3 747 aaKnown RBP28.12■■■□□ 2.09
PIF1-205ENST00000559239 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
PIF1-205ENST00000559239 CC2D2AQ9P2K1 1620 aa28.11■■■□□ 2.09
PIF1-205ENST00000559239 APLP2Q06481 763 aa28.09■■■□□ 2.09
PIF1-205ENST00000559239 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
PIF1-205ENST00000559239 ERICH3Q5RHP9 1530 aa28.07■■■□□ 2.08
PIF1-205ENST00000559239 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
PIF1-205ENST00000559239 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
PIF1-205ENST00000559239 CUX2O14529 1486 aa27.97■■■□□ 2.07
PIF1-205ENST00000559239 FGD5Q6ZNL6 1462 aa27.91■■■□□ 2.06
PIF1-205ENST00000559239 KANK4Q5T7N3 995 aaPredicted RBP27.89■■■□□ 2.05
PIF1-205ENST00000559239 IGF1RP08069 1367 aa27.88■■■□□ 2.05
PIF1-205ENST00000559239 FANCD2Q9BXW9 1451 aa27.83■■■□□ 2.05
PIF1-205ENST00000559239 NESP48681 1621 aa27.83■■■□□ 2.05
PIF1-205ENST00000559239 ARHGAP35Q9NRY4 1499 aa27.8■■■□□ 2.04
PIF1-205ENST00000559239 CARMIL1Q5VZK9 1371 aa27.75■■■□□ 2.03
PIF1-205ENST00000559239 RAD54L2Q9Y4B4 1467 aa27.72■■■□□ 2.03
PIF1-205ENST00000559239 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.03
PIF1-205ENST00000559239 DIEXFQ68CQ4 756 aaKnown RBP27.68■■■□□ 2.02
PIF1-205ENST00000559239 TOPBP1Q92547 1522 aa27.61■■■□□ 2.01
PIF1-205ENST00000559239 P3H3Q8IVL6 736 aa27.61■■■□□ 2.01
PIF1-205ENST00000559239 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
PIF1-205ENST00000559239 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
PIF1-205ENST00000559239 ITGAEP38570 1179 aa27.54■■■□□ 2
PIF1-205ENST00000559239 ZNF316A6NFI3 1004 aaPredicted RBP27.52■■■□□ 2
PIF1-205ENST00000559239 ABCA10Q8WWZ4 1543 aa27.5■■□□□ 1.99
PIF1-205ENST00000559239 RRBP1Q9P2E9 1410 aaKnown RBP27.49■■□□□ 1.99
PIF1-205ENST00000559239 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
PIF1-205ENST00000559239 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
PIF1-205ENST00000559239 CCNB3Q8WWL7 1395 aa27.44■■□□□ 1.98
PIF1-205ENST00000559239 SCAF1Q9H7N4 1312 aaKnown RBP27.43■■□□□ 1.98
PIF1-205ENST00000559239 DHX57Q6P158 1386 aaKnown RBP27.42■■□□□ 1.98
PIF1-205ENST00000559239 TIAM1Q13009 1591 aa27.4■■□□□ 1.98
PIF1-205ENST00000559239 TDRD9Q8NDG6 1382 aaKnown RBP27.4■■□□□ 1.98
PIF1-205ENST00000559239 FHOD3Q2V2M9 1422 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms