RNA–Protein interactions for RNA: ENST00000506702.5

PACRGL-215, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 1,233 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-215ENST00000506702 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
PACRGL-215ENST00000506702 CCDC180Q9P1Z9 1646 aa35.58■■■■□ 3.29
PACRGL-215ENST00000506702 ABCC9O60706 1549 aa34.96■■■■□ 3.19
PACRGL-215ENST00000506702 RB1CC1Q8TDY2 1594 aa33.63■■■□□ 2.97
PACRGL-215ENST00000506702 DCAF8L2P0C7V8 631 aa33.61■■■□□ 2.97
PACRGL-215ENST00000506702 NACADO15069 1562 aa33.6■■■□□ 2.97
PACRGL-215ENST00000506702 MYO15BQ96JP2 1530 aa33.43■■■□□ 2.94
PACRGL-215ENST00000506702 ZCCHC6Q5VYS8 1495 aaKnown RBP33.28■■■□□ 2.92
PACRGL-215ENST00000506702 DCAF1Q9Y4B6 1507 aa33.19■■■□□ 2.9
PACRGL-215ENST00000506702 PABPN1Q86U42 306 aaKnown RBP eCLIP32.74■■■□□ 2.83
PACRGL-215ENST00000506702 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
PACRGL-215ENST00000506702 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
PACRGL-215ENST00000506702 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
PACRGL-215ENST00000506702 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
PACRGL-215ENST00000506702 DNAJC5BQ9UF47 199 aa32.32■■■□□ 2.76
PACRGL-215ENST00000506702 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
PACRGL-215ENST00000506702 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
PACRGL-215ENST00000506702 CECR2Q9BXF3 1484 aa31.49■■■□□ 2.63
PACRGL-215ENST00000506702 NCAPD3P42695 1498 aa31.07■■■□□ 2.56
PACRGL-215ENST00000506702 BAZ1AQ9NRL2 1556 aaPredicted RBP31.05■■■□□ 2.56
PACRGL-215ENST00000506702 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
PACRGL-215ENST00000506702 ATAD2BQ9ULI0 1458 aa30.98■■■□□ 2.55
PACRGL-215ENST00000506702 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
PACRGL-215ENST00000506702 MROH2BQ7Z745 1585 aa30.79■■■□□ 2.52
PACRGL-215ENST00000506702 PEG3Q9GZU2 1588 aa30.79■■■□□ 2.52
PACRGL-215ENST00000506702 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
PACRGL-215ENST00000506702 BAZ1BQ9UIG0 1483 aaKnown RBP30.7■■■□□ 2.5
PACRGL-215ENST00000506702 RSF1Q96T23 1441 aaPredicted RBP30.48■■■□□ 2.47
PACRGL-215ENST00000506702 WIZO95785 1651 aa30.39■■■□□ 2.46
PACRGL-215ENST00000506702 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
PACRGL-215ENST00000506702 NESP48681 1621 aa30.19■■■□□ 2.42
PACRGL-215ENST00000506702 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
PACRGL-215ENST00000506702 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
PACRGL-215ENST00000506702 TOP2AP11388 1531 aaKnown RBP30.13■■■□□ 2.41
PACRGL-215ENST00000506702 PDS5BQ9NTI5 1447 aa30.08■■■□□ 2.41
PACRGL-215ENST00000506702 CUX2O14529 1486 aa29.98■■■□□ 2.39
PACRGL-215ENST00000506702 CFTRP13569 1480 aa29.9■■■□□ 2.38
PACRGL-215ENST00000506702 CCDC88BA6NC98 1476 aa29.84■■■□□ 2.37
PACRGL-215ENST00000506702 KIF21AQ7Z4S6 1674 aa29.74■■■□□ 2.35
PACRGL-215ENST00000506702 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
PACRGL-215ENST00000506702 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
PACRGL-215ENST00000506702 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
PACRGL-215ENST00000506702 MRC2Q9UBG0 1479 aa29.68■■■□□ 2.34
PACRGL-215ENST00000506702 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
PACRGL-215ENST00000506702 WDR62O43379 1518 aa29.54■■■□□ 2.32
PACRGL-215ENST00000506702 PRDM2Q13029 1718 aa29.44■■■□□ 2.3
PACRGL-215ENST00000506702 URB2Q14146 1524 aaKnown RBP29.38■■■□□ 2.29
PACRGL-215ENST00000506702 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
PACRGL-215ENST00000506702 ABCC8Q09428 1581 aa29.34■■■□□ 2.29
PACRGL-215ENST00000506702 TOPBP1Q92547 1522 aa29.2■■■□□ 2.27
PACRGL-215ENST00000506702 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
PACRGL-215ENST00000506702 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
PACRGL-215ENST00000506702 POLA1P09884 1462 aaPredicted RBP28.94■■■□□ 2.22
PACRGL-215ENST00000506702 SOGA1O94964 1423 aa28.92■■■□□ 2.22
PACRGL-215ENST00000506702 ZNF608Q9ULD9 1512 aaPredicted RBP28.9■■■□□ 2.22
PACRGL-215ENST00000506702 CUX1P39880 1505 aa28.89■■■□□ 2.21
PACRGL-215ENST00000506702 OSCARQ8IYS5 282 aa28.86■■■□□ 2.21
PACRGL-215ENST00000506702 TARBP1Q13395 1621 aaKnown RBP28.85■■■□□ 2.21
PACRGL-215ENST00000506702 FGD5Q6ZNL6 1462 aa28.84■■■□□ 2.21
PACRGL-215ENST00000506702 RAD54L2Q9Y4B4 1467 aa28.81■■■□□ 2.2
PACRGL-215ENST00000506702 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.2
PACRGL-215ENST00000506702 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
PACRGL-215ENST00000506702 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
PACRGL-215ENST00000506702 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
PACRGL-215ENST00000506702 WDR97A6NE52 1622 aa28.7■■■□□ 2.19
PACRGL-215ENST00000506702 TOP2BQ02880 1626 aa28.63■■■□□ 2.17
PACRGL-215ENST00000506702 ABCA10Q8WWZ4 1543 aa28.6■■■□□ 2.17
PACRGL-215ENST00000506702 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
PACRGL-215ENST00000506702 GRIN2BQ13224 1484 aa28.57■■■□□ 2.16
PACRGL-215ENST00000506702 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
PACRGL-215ENST00000506702 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
PACRGL-215ENST00000506702 FBLN2P98095 1184 aa28.53■■■□□ 2.16
PACRGL-215ENST00000506702 CHMP7Q8WUX9 453 aaPredicted RBP28.5■■■□□ 2.15
PACRGL-215ENST00000506702 MAGI1Q96QZ7 1491 aaPredicted RBP28.5■■■□□ 2.15
PACRGL-215ENST00000506702 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
PACRGL-215ENST00000506702 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.13
PACRGL-215ENST00000506702 SYNJ2O15056 1496 aa28.39■■■□□ 2.13
PACRGL-215ENST00000506702 CHD1O14646 1710 aa28.33■■■□□ 2.13
PACRGL-215ENST00000506702 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
PACRGL-215ENST00000506702 ERICH3Q5RHP9 1530 aa28.27■■■□□ 2.12
PACRGL-215ENST00000506702 FHAD1B1AJZ9 1412 aa28.24■■■□□ 2.11
PACRGL-215ENST00000506702 KIF27Q86VH2 1401 aa28.2■■■□□ 2.11
PACRGL-215ENST00000506702 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
PACRGL-215ENST00000506702 ARHGEF11O15085 1522 aa28.17■■■□□ 2.1
PACRGL-215ENST00000506702 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
PACRGL-215ENST00000506702 IGF1RP08069 1367 aa28.13■■■□□ 2.09
PACRGL-215ENST00000506702 RIMBP3CA6NJZ7 1639 aa28.13■■■□□ 2.09
PACRGL-215ENST00000506702 RIMBP3BA6NNM3 1639 aa28.13■■■□□ 2.09
PACRGL-215ENST00000506702 RIMBP3Q9UFD9 1639 aa28.13■■■□□ 2.09
PACRGL-215ENST00000506702 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
PACRGL-215ENST00000506702 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
PACRGL-215ENST00000506702 NUP160Q12769 1436 aa28.07■■■□□ 2.08
PACRGL-215ENST00000506702 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
PACRGL-215ENST00000506702 CARMIL1Q5VZK9 1371 aa27.96■■■□□ 2.07
PACRGL-215ENST00000506702 CEP170Q5SW79 1584 aa27.93■■■□□ 2.06
PACRGL-215ENST00000506702 CUL7Q14999 1698 aa27.91■■■□□ 2.06
PACRGL-215ENST00000506702 ARAP1Q96P48 1450 aa27.91■■■□□ 2.06
PACRGL-215ENST00000506702 JPH4Q96JJ6 628 aa27.91■■■□□ 2.06
PACRGL-215ENST00000506702 KIAA0586Q9BVV6 1533 aa27.81■■■□□ 2.04
PACRGL-215ENST00000506702 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms