Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TFR2-213ENST00000490084 2196 ntTSL 216.12■□□□□ 0.172e-7■□□□□ 8.3
LSM11P83369 LCN12-205ENST00000470501 1804 ntTSL 217.07■□□□□ 0.323e-6■□□□□ 8.3
LSM11P83369 LCN12-213ENST00000494713 524 ntTSL 213.94□□□□□ -0.183e-6■□□□□ 8.3
LSM11P83369 LCN12-204ENST00000466277 781 ntTSL 213.57□□□□□ -0.243e-6■□□□□ 8.3
LSM11P83369 LCN12-207ENST00000476751 536 ntTSL 213.38□□□□□ -0.273e-6■□□□□ 8.3
LSM11P83369 LCN12-208ENST00000480204 436 ntTSL 313.38□□□□□ -0.273e-6■□□□□ 8.3
LSM11P83369 LCN12-206ENST00000471615 489 ntTSL 513.35□□□□□ -0.273e-6■□□□□ 8.3
LSM11P83369 LCN12-210ENST00000491316 629 ntTSL 313.3□□□□□ -0.283e-6■□□□□ 8.3
LSM11P83369 LCN12-201ENST00000371632 403 ntTSL 210.9□□□□□ -0.663e-6■□□□□ 8.3
LSM11P83369 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.793e-6■□□□□ 8.3
LSM11P83369 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.337e-25■□□□□ 8.3
LSM11P83369 H3F3B-203ENST00000586518 1701 nt27.53■■■□□ 25e-9■□□□□ 8.3
LSM11P83369 H3F3B-202ENST00000586270 468 ntTSL 221.37■■□□□ 1.015e-9■□□□□ 8.3
LSM11P83369 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.235e-9■□□□□ 8.3
LSM11P83369 H3F3B-209ENST00000589949 842 ntTSL 215.6■□□□□ 0.095e-9■□□□□ 8.3
LSM11P83369 H3F3B-207ENST00000589417 575 ntTSL 215.36■□□□□ 0.055e-9■□□□□ 8.3
LSM11P83369 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.055e-9■□□□□ 8.3
LSM11P83369 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.365e-9■□□□□ 8.3
LSM11P83369 H3F3B-213ENST00000593254 894 ntTSL 511.95□□□□□ -0.55e-9■□□□□ 8.3
LSM11P83369 H3F3B-205ENST00000587171 586 ntTSL 211.36□□□□□ -0.595e-9■□□□□ 8.3
LSM11P83369 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC10.53□□□□□ -0.725e-9■□□□□ 8.3
LSM11P83369 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC9.37□□□□□ -0.915e-9■□□□□ 8.3
LSM11P83369 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC8.59□□□□□ -1.035e-9■□□□□ 8.3
LSM11P83369 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC11.67□□□□□ -0.542e-6■□□□□ 8.3
LSM11P83369 AL049796.1-201ENST00000565336 1766 ntBASIC19.32■□□□□ 0.689e-30■□□□□ 8.3
LSM11P83369 ASPSCR1-216ENST00000583503 641 ntTSL 315.48■□□□□ 0.076e-9■□□□□ 8.3
LSM11P83369 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.46■□□□□ 0.711e-7■□□□□ 8.2
LSM11P83369 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.73■□□□□ 0.598e-21■□□□□ 8.2
LSM11P83369 ATG4B-225ENST00000494465 2365 ntTSL 515.39■□□□□ 0.058e-21■□□□□ 8.2
LSM11P83369 GGA2-208ENST00000566685 571 ntTSL 414.36□□□□□ -0.111e-7■□□□□ 8.2
LSM11P83369 ATG4B-220ENST00000482507 2414 ntTSL 1 (best)14.09□□□□□ -0.158e-21■□□□□ 8.2
LSM11P83369 ATG4B-201ENST00000344376 1566 ntTSL 513.91□□□□□ -0.188e-21■□□□□ 8.2
LSM11P83369 GGA2-213ENST00000568922 1807 ntTSL 211.53□□□□□ -0.561e-7■□□□□ 8.2
LSM11P83369 GGA2-201ENST00000309859 5973 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.791e-7■□□□□ 8.2
LSM11P83369 GGA2-210ENST00000567339 293 ntTSL 38.71□□□□□ -1.021e-7■□□□□ 8.2
LSM11P83369 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.651e-13■□□□□ 8.2
LSM11P83369 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.941e-13■□□□□ 8.2
LSM11P83369 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC6.43□□□□□ -1.381e-13■□□□□ 8.2
LSM11P83369 FKBP10-207ENST00000490938 837 ntTSL 213.7□□□□□ -0.222e-41■□□□□ 8.2
LSM11P83369 MICALL2-212ENST00000487187 764 ntTSL 516■□□□□ 0.153e-7■□□□□ 8.2
LSM11P83369 PI4KA-202ENST00000399213 1636 ntTSL 514.37□□□□□ -0.113e-7■□□□□ 8.2
LSM11P83369 INTS11-236ENST00000528879 1524 ntTSL 513.6□□□□□ -0.236e-7■□□□□ 8.2
LSM11P83369 PI4KA-207ENST00000466772 3109 ntTSL 213.14□□□□□ -0.313e-7■□□□□ 8.2
LSM11P83369 PI4KA-209ENST00000477245 3026 ntTSL 1 (best)12.47□□□□□ -0.413e-7■□□□□ 8.2
LSM11P83369 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.443e-7■□□□□ 8.2
LSM11P83369 PI4KA-217ENST00000492581 3925 ntTSL 210.99□□□□□ -0.653e-7■□□□□ 8.2
LSM11P83369 PI4KA-211ENST00000482030 655 ntTSL 28.76□□□□□ -1.013e-7■□□□□ 8.2
LSM11P83369 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.127e-7■□□□□ 8.2
LSM11P83369 GPS1-225ENST00000585084 997 ntTSL 324.71■■□□□ 1.557e-7■□□□□ 8.2
LSM11P83369 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.227e-7■□□□□ 8.2
LSM11P83369 SPPL2B-205ENST00000589515 1733 ntTSL 518.77■□□□□ 0.597e-7■□□□□ 8.2
LSM11P83369 PES1-212ENST00000488719 1732 ntTSL 216.73■□□□□ 0.277e-7■□□□□ 8.2
LSM11P83369 GPS1-214ENST00000581418 580 ntTSL 216.14■□□□□ 0.177e-7■□□□□ 8.2
LSM11P83369 GPS1-221ENST00000583961 581 ntTSL 515.59■□□□□ 0.097e-7■□□□□ 8.2
LSM11P83369 GPS1-212ENST00000580716 567 ntTSL 415.18■□□□□ 0.027e-7■□□□□ 8.2
LSM11P83369 GPS1-216ENST00000582327 561 ntTSL 415.18■□□□□ 0.027e-7■□□□□ 8.2
LSM11P83369 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.017e-7■□□□□ 8.2
LSM11P83369 EEF1D-221ENST00000528382 308 ntTSL 514.97□□□□□ -0.013e-11■□□□□ 8.2
LSM11P83369 GPS1-207ENST00000578392 552 ntTSL 414.43□□□□□ -0.17e-7■□□□□ 8.2
LSM11P83369 EEF1D-227ENST00000529576 424 ntTSL 214.41□□□□□ -0.13e-11■□□□□ 8.2
LSM11P83369 GPS1-213ENST00000580723 594 ntTSL 414.3□□□□□ -0.127e-7■□□□□ 8.2
LSM11P83369 EEF1D-229ENST00000530109 533 ntTSL 214.07□□□□□ -0.163e-11■□□□□ 8.2
LSM11P83369 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.177e-7■□□□□ 8.2
LSM11P83369 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.96□□□□□ -0.187e-7■□□□□ 8.2
LSM11P83369 CPSF1-205ENST00000531042 580 ntTSL 513.7□□□□□ -0.226e-10■□□□□ 8.2
LSM11P83369 GPS1-211ENST00000580627 543 ntTSL 413.65□□□□□ -0.227e-7■□□□□ 8.2
LSM11P83369 GPS1-219ENST00000583641 795 ntTSL 213.55□□□□□ -0.247e-7■□□□□ 8.2
LSM11P83369 PES1-208ENST00000441668 999 ntTSL 313□□□□□ -0.337e-7■□□□□ 8.2
LSM11P83369 KHSRP-203ENST00000594745 379 ntTSL 312.64□□□□□ -0.397e-7■□□□□ 8.2
LSM11P83369 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.47□□□□□ -0.417e-7■□□□□ 8.2
LSM11P83369 PES1-203ENST00000402281 2760 ntTSL 2 BASIC11.62□□□□□ -0.557e-7■□□□□ 8.2
LSM11P83369 GPS1-215ENST00000581578 470 ntTSL 411.45□□□□□ -0.587e-7■□□□□ 8.2
LSM11P83369 GPS1-220ENST00000583885 594 ntTSL 410.8□□□□□ -0.687e-7■□□□□ 8.2
LSM11P83369 GPS1-217ENST00000583009 574 ntTSL 410.74□□□□□ -0.697e-7■□□□□ 8.2
LSM11P83369 EEF1D-219ENST00000527741 3718 ntTSL 210.51□□□□□ -0.733e-11■□□□□ 8.2
LSM11P83369 KHSRP-208ENST00000597656 328 ntTSL 57.47□□□□□ -1.217e-7■□□□□ 8.2
LSM11P83369 MDK-209ENST00000489525 1339 ntTSL 521.87■■□□□ 1.093e-6■□□□□ 8.2
LSM11P83369 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.923e-6■□□□□ 8.2
LSM11P83369 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.833e-6■□□□□ 8.2
LSM11P83369 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.793e-6■□□□□ 8.2
LSM11P83369 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.08■□□□□ 0.483e-6■□□□□ 8.2
LSM11P83369 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.91■□□□□ 0.463e-6■□□□□ 8.2
LSM11P83369 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.363e-6■□□□□ 8.2
LSM11P83369 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.313e-6■□□□□ 8.2
LSM11P83369 MDK-211ENST00000533283 498 ntTSL 313.89□□□□□ -0.193e-6■□□□□ 8.2
LSM11P83369 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.91□□□□□ -0.021e-14■□□□□ 8.2
LSM11P83369 NUP85-225ENST00000584155 300 ntTSL 26.69□□□□□ -1.344e-7■□□□□ 8.2
LSM11P83369 NUP85-213ENST00000579838 373 ntTSL 44.37□□□□□ -1.714e-7■□□□□ 8.2
LSM11P83369 NUP85-214ENST00000579900 528 ntTSL 53.94□□□□□ -1.784e-7■□□□□ 8.2
LSM11P83369 NUP85-209ENST00000578987 388 ntTSL 33.36□□□□□ -1.874e-7■□□□□ 8.2
LSM11P83369 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.033e-68■□□□□ 8.2
LSM11P83369 XIST-211ENST00000635841 1734 ntTSL 5 BASIC8.04□□□□□ -1.124e-28■□□□□ 8.2
LSM11P83369 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.62□□□□□ -1.194e-28■□□□□ 8.2
LSM11P83369 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.46□□□□□ -1.694e-28■□□□□ 8.2
LSM11P83369 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.28■□□□□ 0.369e-8■□□□□ 8.2
LSM11P83369 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.92■□□□□ 0.39e-8■□□□□ 8.2
LSM11P83369 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.166e-9■□□□□ 8.2
LSM11P83369 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.74■□□□□ 0.116e-9■□□□□ 8.2
LSM11P83369 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.039e-8■□□□□ 8.2
LSM11P83369 NAP1L4-207ENST00000469805 2294 ntTSL 315.1■□□□□ 0.016e-9■□□□□ 8.2
Retrieved 100 of 11,495 protein–RNA pairs in 346.5 ms