RNA–Protein interactions for RNA: ENST00000579900.5

NUP85-214, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-214ENST00000579900 CHIC1Q5VXU3 224 aa8.96□□□□□ -0.98
NUP85-214ENST00000579900 AEBP2Q6ZN18 517 aaPredicted RBP8.9□□□□□ -0.98
NUP85-214ENST00000579900 NISCHQ9Y2I1 1504 aa7.98□□□□□ -1.13
NUP85-214ENST00000579900 PHF23Q9BUL5 403 aaPredicted RBP7.9□□□□□ -1.14
NUP85-214ENST00000579900 SENP3Q9H4L4 574 aaPredicted RBP7.53□□□□□ -1.2
NUP85-214ENST00000579900 CCDC180Q9P1Z9 1646 aa7.41□□□□□ -1.22
NUP85-214ENST00000579900 PLPPR3Q6T4P5 718 aa7.39□□□□□ -1.23
NUP85-214ENST00000579900 ABCC9O60706 1549 aa7.37□□□□□ -1.23
NUP85-214ENST00000579900 RB1CC1Q8TDY2 1594 aa7.08□□□□□ -1.28
NUP85-214ENST00000579900 DNAJC5BQ9UF47 199 aa6.99□□□□□ -1.29
NUP85-214ENST00000579900 NACADO15069 1562 aa6.99□□□□□ -1.29
NUP85-214ENST00000579900 UNC13AQ9UPW8 1703 aa6.93□□□□□ -1.3
NUP85-214ENST00000579900 FOXD1Q16676 465 aa6.93□□□□□ -1.3
NUP85-214ENST00000579900 ADRA2BP18089 450 aa6.88□□□□□ -1.31
NUP85-214ENST00000579900 PPP6R1Q9UPN7 881 aa6.87□□□□□ -1.31
NUP85-214ENST00000579900 MYO15BQ96JP2 1530 aa6.86□□□□□ -1.31
NUP85-214ENST00000579900 SHROOM4Q9ULL8 1493 aa6.86□□□□□ -1.31
NUP85-214ENST00000579900 BICRAQ9NZM4 1560 aa6.81□□□□□ -1.32
NUP85-214ENST00000579900 CC2D2AQ9P2K1 1620 aa6.73□□□□□ -1.33
NUP85-214ENST00000579900 PABPN1Q86U42 306 aaKnown RBP eCLIP6.73□□□□□ -1.336e-11■■■□□ 15.6
NUP85-214ENST00000579900 CECR2Q9BXF3 1484 aa6.72□□□□□ -1.33
NUP85-214ENST00000579900 DNAJC5Q9H3Z4 198 aa6.68□□□□□ -1.34
NUP85-214ENST00000579900 EIF4G1Q04637 1599 aaKnown RBP6.68□□□□□ -1.34
NUP85-214ENST00000579900 DCAF1Q9Y4B6 1507 aa6.67□□□□□ -1.34
NUP85-214ENST00000579900 KCNA4P22459 653 aa6.66□□□□□ -1.34
NUP85-214ENST00000579900 DCAF8L2P0C7V8 631 aa6.63□□□□□ -1.35
NUP85-214ENST00000579900 PIAS4Q8N2W9 510 aaPredicted RBP6.59□□□□□ -1.35
NUP85-214ENST00000579900 ZCCHC6Q5VYS8 1495 aaKnown RBP6.59□□□□□ -1.36
NUP85-214ENST00000579900 CUX2O14529 1486 aa6.58□□□□□ -1.36
NUP85-214ENST00000579900 SCRIBQ14160 1630 aa6.57□□□□□ -1.36
NUP85-214ENST00000579900 PPP4R3CPQ6ZMV5 832 aa6.53□□□□□ -1.36
NUP85-214ENST00000579900 EHMT2Q96KQ7 1210 aa6.46□□□□□ -1.38
NUP85-214ENST00000579900 NCBP3Q53F19 620 aaKnown RBP6.44□□□□□ -1.38
NUP85-214ENST00000579900 ERCC6Q03468 1493 aa6.44□□□□□ -1.38
NUP85-214ENST00000579900 SLC4A1APQ9BWU0 796 aaKnown RBP6.39□□□□□ -1.39
NUP85-214ENST00000579900 NCAPD3P42695 1498 aa6.39□□□□□ -1.39
NUP85-214ENST00000579900 HMGXB3Q12766 1538 aa6.39□□□□□ -1.39
NUP85-214ENST00000579900 SMARCA2P51531 1590 aa6.37□□□□□ -1.39
NUP85-214ENST00000579900 THOC2Q8NI27 1593 aaKnown RBP6.36□□□□□ -1.39
NUP85-214ENST00000579900 NPM3O75607 178 aaKnown RBP6.35□□□□□ -1.39
NUP85-214ENST00000579900 LAMC3Q9Y6N6 1575 aa6.35□□□□□ -1.39
NUP85-214ENST00000579900 CSRNP3Q8WYN3 585 aa6.32□□□□□ -1.4
NUP85-214ENST00000579900 ATAD2BQ9ULI0 1458 aa6.31□□□□□ -1.4
NUP85-214ENST00000579900 MSH5O43196 834 aa6.31□□□□□ -1.4
NUP85-214ENST00000579900 CNKSR2Q8WXI2 1034 aa6.31□□□□□ -1.4
NUP85-214ENST00000579900 SMARCA4P51532 1647 aa6.31□□□□□ -1.4
NUP85-214ENST00000579900 SCAF1Q9H7N4 1312 aaKnown RBP6.3□□□□□ -1.4
NUP85-214ENST00000579900 KIF21AQ7Z4S6 1674 aa6.3□□□□□ -1.4
NUP85-214ENST00000579900 PEG3Q9GZU2 1588 aa6.29□□□□□ -1.4
NUP85-214ENST00000579900 BAZ1AQ9NRL2 1556 aaPredicted RBP6.27□□□□□ -1.41
NUP85-214ENST00000579900 PDS5BQ9NTI5 1447 aa6.26□□□□□ -1.41
NUP85-214ENST00000579900 NESP48681 1621 aa6.26□□□□□ -1.41
NUP85-214ENST00000579900 BAZ1BQ9UIG0 1483 aaKnown RBP6.26□□□□□ -1.41
NUP85-214ENST00000579900 WDR62O43379 1518 aa6.23□□□□□ -1.41
NUP85-214ENST00000579900 TRIM41Q8WV44 630 aa6.22□□□□□ -1.41
NUP85-214ENST00000579900 MRC2Q9UBG0 1479 aa6.21□□□□□ -1.42
NUP85-214ENST00000579900 ZBTB22O15209 634 aa6.16□□□□□ -1.42
NUP85-214ENST00000579900 PRDM2Q13029 1718 aa6.16□□□□□ -1.42
NUP85-214ENST00000579900 CEP164Q9UPV0 1460 aa6.15□□□□□ -1.42
NUP85-214ENST00000579900 CADPSQ9ULU8 1353 aa6.15□□□□□ -1.43
NUP85-214ENST00000579900 RIMBP3CA6NJZ7 1639 aa6.14□□□□□ -1.43
NUP85-214ENST00000579900 RIMBP3BA6NNM3 1639 aa6.14□□□□□ -1.43
NUP85-214ENST00000579900 RIMBP3Q9UFD9 1639 aa6.14□□□□□ -1.43
NUP85-214ENST00000579900 MAPK8IP2Q13387 824 aaPredicted RBP6.13□□□□□ -1.43
NUP85-214ENST00000579900 OSCARQ8IYS5 282 aa6.13□□□□□ -1.43
NUP85-214ENST00000579900 RNF216Q9NWF9 866 aaPredicted RBP6.13□□□□□ -1.43
NUP85-214ENST00000579900 MROH2BQ7Z745 1585 aa6.1□□□□□ -1.43
NUP85-214ENST00000579900 FANCD2Q9BXW9 1451 aa6.09□□□□□ -1.43
NUP85-214ENST00000579900 ARHGEF11O15085 1522 aa6.08□□□□□ -1.44
NUP85-214ENST00000579900 FOXD4L1Q9NU39 408 aa6.07□□□□□ -1.44
NUP85-214ENST00000579900 CFTRP13569 1480 aa6.07□□□□□ -1.44
NUP85-214ENST00000579900 DMRT2Q9Y5R5 561 aa6.06□□□□□ -1.44
NUP85-214ENST00000579900 HOXD11P31277 338 aaPredicted RBP6.05□□□□□ -1.44
NUP85-214ENST00000579900 WIZO95785 1651 aa6.04□□□□□ -1.44
NUP85-214ENST00000579900 IFT140Q96RY7 1462 aa6.04□□□□□ -1.44
NUP85-214ENST00000579900 URB2Q14146 1524 aaKnown RBP6.04□□□□□ -1.44
NUP85-214ENST00000579900 CHD1O14646 1710 aa6.03□□□□□ -1.44
NUP85-214ENST00000579900 RSF1Q96T23 1441 aaPredicted RBP6.03□□□□□ -1.44
NUP85-214ENST00000579900 EIF4G3O43432 1585 aaKnown RBP6.02□□□□□ -1.45
NUP85-214ENST00000579900 ABCC8Q09428 1581 aa6.02□□□□□ -1.45
NUP85-214ENST00000579900 WDR97A6NE52 1622 aa6.01□□□□□ -1.45
NUP85-214ENST00000579900 TOP2AP11388 1531 aaKnown RBP6□□□□□ -1.45
NUP85-214ENST00000579900 ARAP1Q96P48 1450 aa5.98□□□□□ -1.45
NUP85-214ENST00000579900 DNMBPQ6XZF7 1577 aa5.97□□□□□ -1.45
NUP85-214ENST00000579900 TOPBP1Q92547 1522 aa5.96□□□□□ -1.46
NUP85-214ENST00000579900 TARBP1Q13395 1621 aaKnown RBP5.96□□□□□ -1.46
NUP85-214ENST00000579900 ZNF608Q9ULD9 1512 aaPredicted RBP5.95□□□□□ -1.46
NUP85-214ENST00000579900 TRHP20396 242 aaPredicted RBP5.95□□□□□ -1.46
NUP85-214ENST00000579900 SYNJ1O43426 1573 aa5.94□□□□□ -1.46
NUP85-214ENST00000579900 SLC4A2P04920 1241 aa5.94□□□□□ -1.46
NUP85-214ENST00000579900 CYB5RLQ6IPT4 315 aa5.94□□□□□ -1.46
NUP85-214ENST00000579900 CLASP1Q7Z460 1538 aa5.94□□□□□ -1.46
NUP85-214ENST00000579900 MAGI1Q96QZ7 1491 aaPredicted RBP5.9□□□□□ -1.46
NUP85-214ENST00000579900 ATXN8OSP0DMR3 200 aa5.88□□□□□ -1.47
NUP85-214ENST00000579900 POLA1P09884 1462 aaPredicted RBP5.88□□□□□ -1.47
NUP85-214ENST00000579900 PBRM1Q86U86 1689 aa5.88□□□□□ -1.47
NUP85-214ENST00000579900 MYCNP04198 464 aaPredicted RBP5.87□□□□□ -1.47
NUP85-214ENST00000579900 SYNJ2O15056 1496 aa5.86□□□□□ -1.47
NUP85-214ENST00000579900 AQRO60306 1485 aaKnown RBP eCLIP5.86□□□□□ -1.477e-7■■□□□ 12.5
NUP85-214ENST00000579900 KIF13AQ9H1H9 1805 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms