RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 NISCHQ9Y2I1 1504 aa9.61□□□□□ -0.87
NUP85-209ENST00000578987 ABCC9O60706 1549 aa8.73□□□□□ -1.01
NUP85-209ENST00000578987 CCDC180Q9P1Z9 1646 aa8.62□□□□□ -1.03
NUP85-209ENST00000578987 DNAJC5BQ9UF47 199 aa8.28□□□□□ -1.08
NUP85-209ENST00000578987 DCAF8L2P0C7V8 631 aa8.27□□□□□ -1.09
NUP85-209ENST00000578987 RB1CC1Q8TDY2 1594 aa8.24□□□□□ -1.09
NUP85-209ENST00000578987 UNC13AQ9UPW8 1703 aa8.17□□□□□ -1.1
NUP85-209ENST00000578987 PABPN1Q86U42 306 aaKnown RBP eCLIP8.16□□□□□ -1.16e-11■■■□□ 15.6
NUP85-209ENST00000578987 NACADO15069 1562 aa8.15□□□□□ -1.1
NUP85-209ENST00000578987 BICRAQ9NZM4 1560 aa8.03□□□□□ -1.12
NUP85-209ENST00000578987 MYO15BQ96JP2 1530 aa7.97□□□□□ -1.13
NUP85-209ENST00000578987 ZCCHC6Q5VYS8 1495 aaKnown RBP7.93□□□□□ -1.14
NUP85-209ENST00000578987 SCRIBQ14160 1630 aa7.92□□□□□ -1.14
NUP85-209ENST00000578987 CC2D2AQ9P2K1 1620 aa7.88□□□□□ -1.15
NUP85-209ENST00000578987 DCAF1Q9Y4B6 1507 aa7.88□□□□□ -1.15
NUP85-209ENST00000578987 CECR2Q9BXF3 1484 aa7.83□□□□□ -1.16
NUP85-209ENST00000578987 EIF4G1Q04637 1599 aaKnown RBP7.81□□□□□ -1.16
NUP85-209ENST00000578987 SHROOM4Q9ULL8 1493 aa7.77□□□□□ -1.17
NUP85-209ENST00000578987 DNAJC5Q9H3Z4 198 aa7.56□□□□□ -1.2
NUP85-209ENST00000578987 NCAPD3P42695 1498 aa7.53□□□□□ -1.2
NUP85-209ENST00000578987 ATAD2BQ9ULI0 1458 aa7.52□□□□□ -1.21
NUP85-209ENST00000578987 SMARCA4P51532 1647 aa7.52□□□□□ -1.21
NUP85-209ENST00000578987 ERCC6Q03468 1493 aa7.5□□□□□ -1.21
NUP85-209ENST00000578987 NESP48681 1621 aa7.5□□□□□ -1.21
NUP85-209ENST00000578987 SMARCA2P51531 1590 aa7.48□□□□□ -1.21
NUP85-209ENST00000578987 CHIC1Q5VXU3 224 aa7.47□□□□□ -1.21
NUP85-209ENST00000578987 CUX2O14529 1486 aa7.45□□□□□ -1.22
NUP85-209ENST00000578987 HMGXB3Q12766 1538 aa7.45□□□□□ -1.22
NUP85-209ENST00000578987 MROH2BQ7Z745 1585 aa7.45□□□□□ -1.22
NUP85-209ENST00000578987 BAZ1AQ9NRL2 1556 aaPredicted RBP7.45□□□□□ -1.22
NUP85-209ENST00000578987 BAZ1BQ9UIG0 1483 aaKnown RBP7.44□□□□□ -1.22
NUP85-209ENST00000578987 KIF21AQ7Z4S6 1674 aa7.42□□□□□ -1.22
NUP85-209ENST00000578987 WIZO95785 1651 aa7.41□□□□□ -1.22
NUP85-209ENST00000578987 PEG3Q9GZU2 1588 aa7.4□□□□□ -1.22
NUP85-209ENST00000578987 THOC2Q8NI27 1593 aaKnown RBP7.38□□□□□ -1.23
NUP85-209ENST00000578987 LAMC3Q9Y6N6 1575 aa7.37□□□□□ -1.23
NUP85-209ENST00000578987 PDS5BQ9NTI5 1447 aa7.33□□□□□ -1.24
NUP85-209ENST00000578987 CADPSQ9ULU8 1353 aa7.32□□□□□ -1.24
NUP85-209ENST00000578987 TRIM41Q8WV44 630 aa7.28□□□□□ -1.24
NUP85-209ENST00000578987 MRC2Q9UBG0 1479 aa7.27□□□□□ -1.25
NUP85-209ENST00000578987 RSF1Q96T23 1441 aaPredicted RBP7.25□□□□□ -1.25
NUP85-209ENST00000578987 FANCD2Q9BXW9 1451 aa7.24□□□□□ -1.25
NUP85-209ENST00000578987 CEP164Q9UPV0 1460 aa7.24□□□□□ -1.25
NUP85-209ENST00000578987 WDR62O43379 1518 aa7.24□□□□□ -1.25
NUP85-209ENST00000578987 TOP2AP11388 1531 aaKnown RBP7.22□□□□□ -1.25
NUP85-209ENST00000578987 PRDM2Q13029 1718 aa7.21□□□□□ -1.25
NUP85-209ENST00000578987 CFTRP13569 1480 aa7.21□□□□□ -1.26
NUP85-209ENST00000578987 URB2Q14146 1524 aaKnown RBP7.2□□□□□ -1.26
NUP85-209ENST00000578987 CCDC88BA6NC98 1476 aa7.18□□□□□ -1.26
NUP85-209ENST00000578987 OSCARQ8IYS5 282 aa7.18□□□□□ -1.26
NUP85-209ENST00000578987 ZNF608Q9ULD9 1512 aaPredicted RBP7.13□□□□□ -1.27
NUP85-209ENST00000578987 RIMBP3CA6NJZ7 1639 aa7.11□□□□□ -1.27
NUP85-209ENST00000578987 RIMBP3BA6NNM3 1639 aa7.11□□□□□ -1.27
NUP85-209ENST00000578987 RIMBP3Q9UFD9 1639 aa7.11□□□□□ -1.27
NUP85-209ENST00000578987 TOPBP1Q92547 1522 aa7.11□□□□□ -1.27
NUP85-209ENST00000578987 CHD1O14646 1710 aa7.09□□□□□ -1.27
NUP85-209ENST00000578987 FBLN2P98095 1184 aa7.08□□□□□ -1.28
NUP85-209ENST00000578987 AEBP2Q6ZN18 517 aaPredicted RBP7.08□□□□□ -1.28
NUP85-209ENST00000578987 AQRO60306 1485 aaKnown RBP eCLIP7.08□□□□□ -1.287e-7■■□□□ 12.5
NUP85-209ENST00000578987 IFT140Q96RY7 1462 aa7.08□□□□□ -1.28
NUP85-209ENST00000578987 EIF4G3O43432 1585 aaKnown RBP7.07□□□□□ -1.28
NUP85-209ENST00000578987 CYB5RLQ6IPT4 315 aa7.06□□□□□ -1.28
NUP85-209ENST00000578987 DNMBPQ6XZF7 1577 aa7.06□□□□□ -1.28
NUP85-209ENST00000578987 TARBP1Q13395 1621 aaKnown RBP7.05□□□□□ -1.28
NUP85-209ENST00000578987 RAD54L2Q9Y4B4 1467 aa7.04□□□□□ -1.28
NUP85-209ENST00000578987 ABCC8Q09428 1581 aa7.04□□□□□ -1.28
NUP85-209ENST00000578987 ARHGEF11O15085 1522 aa7.04□□□□□ -1.28
NUP85-209ENST00000578987 TDRD9Q8NDG6 1382 aaKnown RBP7.03□□□□□ -1.28
NUP85-209ENST00000578987 SOGA1O94964 1423 aa7.02□□□□□ -1.29
NUP85-209ENST00000578987 SUPT5HO00267 1087 aaKnown RBP7.02□□□□□ -1.29
NUP85-209ENST00000578987 POLA1P09884 1462 aaPredicted RBP7.02□□□□□ -1.29
NUP85-209ENST00000578987 TRHP20396 242 aaPredicted RBP7□□□□□ -1.29
NUP85-209ENST00000578987 FGD5Q6ZNL6 1462 aa6.98□□□□□ -1.29
NUP85-209ENST00000578987 CUX1P39880 1505 aa6.98□□□□□ -1.29
NUP85-209ENST00000578987 CHMP7Q8WUX9 453 aaPredicted RBP6.98□□□□□ -1.29
NUP85-209ENST00000578987 SNAPC4Q5SXM2 1469 aa6.97□□□□□ -1.29
NUP85-209ENST00000578987 ARAP1Q96P48 1450 aa6.97□□□□□ -1.29
NUP85-209ENST00000578987 PBRM1Q86U86 1689 aa6.96□□□□□ -1.29
NUP85-209ENST00000578987 WDR97A6NE52 1622 aa6.94□□□□□ -1.3
NUP85-209ENST00000578987 GRIN2BQ13224 1484 aa6.92□□□□□ -1.3
NUP85-209ENST00000578987 CLASP1Q7Z460 1538 aa6.92□□□□□ -1.3
NUP85-209ENST00000578987 SYNJ1O43426 1573 aa6.92□□□□□ -1.3
NUP85-209ENST00000578987 GAPVD1Q14C86 1478 aa6.91□□□□□ -1.3
NUP85-209ENST00000578987 MAGI1Q96QZ7 1491 aaPredicted RBP6.91□□□□□ -1.3
NUP85-209ENST00000578987 SYNJ2O15056 1496 aa6.9□□□□□ -1.31
NUP85-209ENST00000578987 ABCA5Q8WWZ7 1642 aa6.89□□□□□ -1.31
NUP85-209ENST00000578987 ERCC6L2Q5T890 1561 aa6.88□□□□□ -1.31
NUP85-209ENST00000578987 ABCA10Q8WWZ4 1543 aa6.87□□□□□ -1.31
NUP85-209ENST00000578987 POTEDQ86YR6 584 aa6.86□□□□□ -1.31
NUP85-209ENST00000578987 BIVM-ERCC5R4GMW8 1640 aa6.86□□□□□ -1.31
NUP85-209ENST00000578987 TOP2BQ02880 1626 aa6.85□□□□□ -1.31
NUP85-209ENST00000578987 CEP170Q5SW79 1584 aa6.85□□□□□ -1.31
NUP85-209ENST00000578987 WRNQ14191 1432 aaPredicted RBP eCLIP6.84□□□□□ -1.31
NUP85-209ENST00000578987 GRIN2AQ12879 1464 aa6.84□□□□□ -1.31
NUP85-209ENST00000578987 ADAMTS12P58397 1594 aa6.82□□□□□ -1.32
NUP85-209ENST00000578987 JPH4Q96JJ6 628 aa6.81□□□□□ -1.32
NUP85-209ENST00000578987 KIF13AQ9H1H9 1805 aa6.8□□□□□ -1.32
NUP85-209ENST00000578987 SHROOM2Q13796 1616 aa6.8□□□□□ -1.32
NUP85-209ENST00000578987 FHAD1B1AJZ9 1412 aa6.8□□□□□ -1.32
NUP85-209ENST00000578987 NUP160Q12769 1436 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms