RNA–Protein interactions for RNA: ENST00000567468.5

GGA2-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2 BASIC

Gene GGA2, Length 1,713 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-211ENST00000567468 NISCHQ9Y2I1 1504 aa49.98■■■■■ 5.59
GGA2-211ENST00000567468 CCDC180Q9P1Z9 1646 aa43.84■■■■■ 4.61
GGA2-211ENST00000567468 ABCC9O60706 1549 aa42.29■■■■■ 4.36
GGA2-211ENST00000567468 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
GGA2-211ENST00000567468 DCAF8L2P0C7V8 631 aa41.64■■■■■ 4.26
GGA2-211ENST00000567468 DCAF1Q9Y4B6 1507 aa41.21■■■■■ 4.19
GGA2-211ENST00000567468 NACADO15069 1562 aa41■■■■■ 4.15
GGA2-211ENST00000567468 MYO15BQ96JP2 1530 aa40.95■■■■■ 4.15
GGA2-211ENST00000567468 RB1CC1Q8TDY2 1594 aa40.85■■■■■ 4.13
GGA2-211ENST00000567468 SHROOM4Q9ULL8 1493 aa40.47■■■■■ 4.07
GGA2-211ENST00000567468 SCRIBQ14160 1630 aa40.4■■■■■ 4.06
GGA2-211ENST00000567468 UNC13AQ9UPW8 1703 aa40.1■■■■■ 4.01
GGA2-211ENST00000567468 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.961e-6■□□□□ 9.8
GGA2-211ENST00000567468 BICRAQ9NZM4 1560 aa39.72■■■■□ 3.95
GGA2-211ENST00000567468 CECR2Q9BXF3 1484 aa39■■■■□ 3.83
GGA2-211ENST00000567468 MROH2BQ7Z745 1585 aa38.66■■■■□ 3.78
GGA2-211ENST00000567468 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
GGA2-211ENST00000567468 SMARCA4P51532 1647 aa38.59■■■■□ 3.77
GGA2-211ENST00000567468 EIF4G1Q04637 1599 aaKnown RBP38.56■■■■□ 3.76
GGA2-211ENST00000567468 RSF1Q96T23 1441 aaPredicted RBP38.53■■■■□ 3.76
GGA2-211ENST00000567468 SUPT5HO00267 1087 aaKnown RBP38.52■■■■□ 3.76
GGA2-211ENST00000567468 WIZO95785 1651 aa38.32■■■■□ 3.72
GGA2-211ENST00000567468 CC2D2AQ9P2K1 1620 aa38.19■■■■□ 3.7
GGA2-211ENST00000567468 ATAD2BQ9ULI0 1458 aa38.13■■■■□ 3.69
GGA2-211ENST00000567468 PEG3Q9GZU2 1588 aa38.07■■■■□ 3.68
GGA2-211ENST00000567468 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
GGA2-211ENST00000567468 DNAJC5BQ9UF47 199 aa37.99■■■■□ 3.67
GGA2-211ENST00000567468 BAZ1BQ9UIG0 1483 aaKnown RBP37.87■■■■□ 3.65
GGA2-211ENST00000567468 NCAPD3P42695 1498 aa37.86■■■■□ 3.65
GGA2-211ENST00000567468 TOP2AP11388 1531 aaKnown RBP37.83■■■■□ 3.65
GGA2-211ENST00000567468 HMGXB3Q12766 1538 aa37.75■■■■□ 3.63
GGA2-211ENST00000567468 CCDC88BA6NC98 1476 aa37.47■■■■□ 3.59
GGA2-211ENST00000567468 NESP48681 1621 aa36.92■■■■□ 3.5
GGA2-211ENST00000567468 CADPSQ9ULU8 1353 aa36.87■■■■□ 3.49
GGA2-211ENST00000567468 CFTRP13569 1480 aa36.85■■■■□ 3.49
GGA2-211ENST00000567468 LAMC3Q9Y6N6 1575 aa36.69■■■■□ 3.46
GGA2-211ENST00000567468 PRDM2Q13029 1718 aa36.6■■■■□ 3.45
GGA2-211ENST00000567468 ABCC8Q09428 1581 aa36.52■■■■□ 3.44
GGA2-211ENST00000567468 FANCD2Q9BXW9 1451 aa36.51■■■■□ 3.43
GGA2-211ENST00000567468 PDS5BQ9NTI5 1447 aa36.43■■■■□ 3.42
GGA2-211ENST00000567468 CHIC1Q5VXU3 224 aa36.42■■■■□ 3.42
GGA2-211ENST00000567468 KIF21AQ7Z4S6 1674 aa36.42■■■■□ 3.42
GGA2-211ENST00000567468 CEP164Q9UPV0 1460 aa36.33■■■■□ 3.41
GGA2-211ENST00000567468 ERCC6Q03468 1493 aa36.27■■■■□ 3.4
GGA2-211ENST00000567468 WRNQ14191 1432 aaPredicted RBP eCLIP36.27■■■■□ 3.41e-7■■■■■ 66.8
GGA2-211ENST00000567468 SYNJ1O43426 1573 aa36.22■■■■□ 3.39
GGA2-211ENST00000567468 CUX1P39880 1505 aa36.19■■■■□ 3.38
GGA2-211ENST00000567468 TRIM41Q8WV44 630 aa36.17■■■■□ 3.38
GGA2-211ENST00000567468 URB2Q14146 1524 aaKnown RBP36.13■■■■□ 3.37
GGA2-211ENST00000567468 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
GGA2-211ENST00000567468 TOP2BQ02880 1626 aa36.04■■■■□ 3.36
GGA2-211ENST00000567468 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
GGA2-211ENST00000567468 DNMBPQ6XZF7 1577 aa36.02■■■■□ 3.36
GGA2-211ENST00000567468 BIVM-ERCC5R4GMW8 1640 aa36.01■■■■□ 3.35
GGA2-211ENST00000567468 THOC2Q8NI27 1593 aaKnown RBP35.98■■■■□ 3.35
GGA2-211ENST00000567468 FGD5Q6ZNL6 1462 aa35.89■■■■□ 3.34
GGA2-211ENST00000567468 WDR62O43379 1518 aa35.89■■■■□ 3.34
GGA2-211ENST00000567468 POLA1P09884 1462 aaPredicted RBP35.82■■■■□ 3.32
GGA2-211ENST00000567468 RAD54L2Q9Y4B4 1467 aa35.75■■■■□ 3.31
GGA2-211ENST00000567468 SOGA1O94964 1423 aa35.67■■■■□ 3.3
GGA2-211ENST00000567468 CUX2O14529 1486 aa35.66■■■■□ 3.3
GGA2-211ENST00000567468 FAM9AQ8IZU1 332 aaPredicted RBP35.63■■■■□ 3.29
GGA2-211ENST00000567468 RUSC2Q8N2Y8 1516 aa35.62■■■■□ 3.29
GGA2-211ENST00000567468 TARBP1Q13395 1621 aaKnown RBP35.55■■■■□ 3.28
GGA2-211ENST00000567468 ABCA10Q8WWZ4 1543 aa35.49■■■■□ 3.27
GGA2-211ENST00000567468 WDR97A6NE52 1622 aa35.48■■■■□ 3.27
GGA2-211ENST00000567468 IFT140Q96RY7 1462 aa35.47■■■■□ 3.27
GGA2-211ENST00000567468 TDRD9Q8NDG6 1382 aaKnown RBP35.45■■■■□ 3.27
GGA2-211ENST00000567468 ZNF608Q9ULD9 1512 aaPredicted RBP35.44■■■■□ 3.26
GGA2-211ENST00000567468 KIF27Q86VH2 1401 aa35.38■■■■□ 3.25
GGA2-211ENST00000567468 AQRO60306 1485 aaKnown RBP eCLIP35.35■■■■□ 3.252e-7■■■■□ 25.6
GGA2-211ENST00000567468 ABCA5Q8WWZ7 1642 aa35.29■■■■□ 3.24
GGA2-211ENST00000567468 EHMT2Q96KQ7 1210 aa35.27■■■■□ 3.24
GGA2-211ENST00000567468 GAPVD1Q14C86 1478 aa35.26■■■■□ 3.24
GGA2-211ENST00000567468 EIF4G3O43432 1585 aaKnown RBP35.25■■■■□ 3.23
GGA2-211ENST00000567468 EEA1Q15075 1411 aa35.24■■■■□ 3.23
GGA2-211ENST00000567468 CSRNP3Q8WYN3 585 aa35.23■■■■□ 3.23
GGA2-211ENST00000567468 IGF1RP08069 1367 aa35.18■■■■□ 3.22
GGA2-211ENST00000567468 PBRM1Q86U86 1689 aa35.14■■■■□ 3.22
GGA2-211ENST00000567468 LOC105371045A0A1W2PR82 267 aa35.1■■■■□ 3.21
GGA2-211ENST00000567468 GRIN2BQ13224 1484 aa35.07■■■■□ 3.2
GGA2-211ENST00000567468 ERICH3Q5RHP9 1530 aa35.04■■■■□ 3.2
GGA2-211ENST00000567468 SNAPC4Q5SXM2 1469 aa35■■■■□ 3.19
GGA2-211ENST00000567468 CARMIL1Q5VZK9 1371 aa34.98■■■■□ 3.19
GGA2-211ENST00000567468 PRXQ9BXM0 1461 aa34.98■■■■□ 3.19
GGA2-211ENST00000567468 RAPGEF2Q9Y4G8 1499 aa34.96■■■■□ 3.19
GGA2-211ENST00000567468 CUL7Q14999 1698 aa34.92■■■■□ 3.18
GGA2-211ENST00000567468 KIF21BO75037 1637 aa34.91■■■■□ 3.18
GGA2-211ENST00000567468 ADAMTS12P58397 1594 aa34.91■■■■□ 3.18
GGA2-211ENST00000567468 GOLGA3Q08378 1498 aa34.83■■■■□ 3.17
GGA2-211ENST00000567468 FHAD1B1AJZ9 1412 aa34.83■■■■□ 3.17
GGA2-211ENST00000567468 MAGI1Q96QZ7 1491 aaPredicted RBP34.83■■■■□ 3.17
GGA2-211ENST00000567468 FBLN2P98095 1184 aa34.78■■■■□ 3.16
GGA2-211ENST00000567468 UBTFP17480 764 aaKnown RBP34.77■■■■□ 3.16
GGA2-211ENST00000567468 SYNJ2O15056 1496 aa34.72■■■■□ 3.15
GGA2-211ENST00000567468 CHMP7Q8WUX9 453 aaPredicted RBP34.71■■■■□ 3.15
GGA2-211ENST00000567468 GRIN2AQ12879 1464 aa34.67■■■■□ 3.14
GGA2-211ENST00000567468 CHD1O14646 1710 aa34.64■■■■□ 3.14
GGA2-211ENST00000567468 RANGAP1P46060 587 aaPredicted RBP34.58■■■■□ 3.13
GGA2-211ENST00000567468 TNIKQ9UKE5 1360 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms