RNA–Protein interactions for RNA: ENST00000490084.5

TFR2-213, Transcript of transferrin receptor 2, humanhuman

TSL 2

Gene TFR2, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFR2-213ENST00000490084 NISCHQ9Y2I1 1504 aa36.43■■■■□ 3.42
TFR2-213ENST00000490084 CCDC180Q9P1Z9 1646 aa31.22■■■□□ 2.59
TFR2-213ENST00000490084 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
TFR2-213ENST00000490084 SHROOM4Q9ULL8 1493 aa30.59■■■□□ 2.49
TFR2-213ENST00000490084 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
TFR2-213ENST00000490084 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
TFR2-213ENST00000490084 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
TFR2-213ENST00000490084 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
TFR2-213ENST00000490084 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
TFR2-213ENST00000490084 ABCC9O60706 1549 aa29.04■■■□□ 2.24
TFR2-213ENST00000490084 SCRIBQ14160 1630 aa29.01■■■□□ 2.23
TFR2-213ENST00000490084 NACADO15069 1562 aa28.86■■■□□ 2.21
TFR2-213ENST00000490084 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
TFR2-213ENST00000490084 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
TFR2-213ENST00000490084 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
TFR2-213ENST00000490084 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
TFR2-213ENST00000490084 WIZO95785 1651 aa28.08■■■□□ 2.09
TFR2-213ENST00000490084 LOC105371045A0A1W2PR82 267 aa28.07■■■□□ 2.08
TFR2-213ENST00000490084 BAZ1AQ9NRL2 1556 aaPredicted RBP28.02■■■□□ 2.08
TFR2-213ENST00000490084 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
TFR2-213ENST00000490084 TRIM41Q8WV44 630 aa27.93■■■□□ 2.06
TFR2-213ENST00000490084 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
TFR2-213ENST00000490084 PCGF6Q9BYE7 350 aa27.8■■■□□ 2.04
TFR2-213ENST00000490084 HRCP23327 699 aa27.77■■■□□ 2.04
TFR2-213ENST00000490084 EIF4G1Q04637 1599 aaKnown RBP27.75■■■□□ 2.03
TFR2-213ENST00000490084 TOP2AP11388 1531 aaKnown RBP27.74■■■□□ 2.03
TFR2-213ENST00000490084 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
TFR2-213ENST00000490084 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
TFR2-213ENST00000490084 SMARCA2P51531 1590 aa27.55■■■□□ 2
TFR2-213ENST00000490084 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
TFR2-213ENST00000490084 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
TFR2-213ENST00000490084 PABPN1Q86U42 306 aaKnown RBP eCLIP27.42■■□□□ 1.981e-7■■□□□ 12.3
TFR2-213ENST00000490084 PEG3Q9GZU2 1588 aa27.38■■□□□ 1.97
TFR2-213ENST00000490084 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
TFR2-213ENST00000490084 EHMT2Q96KQ7 1210 aa27.21■■□□□ 1.95
TFR2-213ENST00000490084 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
TFR2-213ENST00000490084 PPARGC1BQ86YN6 1023 aaKnown RBP27.08■■□□□ 1.93
TFR2-213ENST00000490084 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
TFR2-213ENST00000490084 SOGA1O94964 1423 aa27.01■■□□□ 1.91
TFR2-213ENST00000490084 EEA1Q15075 1411 aa27■■□□□ 1.91
TFR2-213ENST00000490084 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
TFR2-213ENST00000490084 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
TFR2-213ENST00000490084 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
TFR2-213ENST00000490084 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
TFR2-213ENST00000490084 CSRNP3Q8WYN3 585 aa26.83■■□□□ 1.89
TFR2-213ENST00000490084 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
TFR2-213ENST00000490084 ZEB1P37275 1124 aaPredicted RBP26.8■■□□□ 1.88
TFR2-213ENST00000490084 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
TFR2-213ENST00000490084 HMGXB3Q12766 1538 aa26.71■■□□□ 1.87
TFR2-213ENST00000490084 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
TFR2-213ENST00000490084 KIF21BO75037 1637 aa26.65■■□□□ 1.86
TFR2-213ENST00000490084 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
TFR2-213ENST00000490084 UBTFP17480 764 aaKnown RBP26.6■■□□□ 1.85
TFR2-213ENST00000490084 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
TFR2-213ENST00000490084 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
TFR2-213ENST00000490084 RAPGEF2Q9Y4G8 1499 aa26.4■■□□□ 1.82
TFR2-213ENST00000490084 CFTRP13569 1480 aa26.38■■□□□ 1.81
TFR2-213ENST00000490084 CLIP1P30622 1438 aa26.37■■□□□ 1.81
TFR2-213ENST00000490084 CUX1P39880 1505 aa26.34■■□□□ 1.81
TFR2-213ENST00000490084 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
TFR2-213ENST00000490084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.3■■□□□ 1.8
TFR2-213ENST00000490084 ERICH3Q5RHP9 1530 aa26.27■■□□□ 1.8
TFR2-213ENST00000490084 VPS8Q8N3P4 1428 aa26.27■■□□□ 1.8
TFR2-213ENST00000490084 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
TFR2-213ENST00000490084 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
TFR2-213ENST00000490084 CCER1Q8TC90 406 aaPredicted RBP26.24■■□□□ 1.79
TFR2-213ENST00000490084 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
TFR2-213ENST00000490084 KIF27Q86VH2 1401 aa26.15■■□□□ 1.78
TFR2-213ENST00000490084 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
TFR2-213ENST00000490084 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
TFR2-213ENST00000490084 RANGAP1P46060 587 aaPredicted RBP25.99■■□□□ 1.75
TFR2-213ENST00000490084 APLP2Q06481 763 aa25.98■■□□□ 1.75
TFR2-213ENST00000490084 CUX2O14529 1486 aa25.91■■□□□ 1.74
TFR2-213ENST00000490084 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.73
TFR2-213ENST00000490084 IGF1RP08069 1367 aa25.86■■□□□ 1.73
TFR2-213ENST00000490084 HNRNPUL2Q1KMD3 747 aaKnown RBP25.83■■□□□ 1.73
TFR2-213ENST00000490084 ARHGAP35Q9NRY4 1499 aa25.83■■□□□ 1.73
TFR2-213ENST00000490084 FANCD2Q9BXW9 1451 aa25.82■■□□□ 1.72
TFR2-213ENST00000490084 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
TFR2-213ENST00000490084 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
TFR2-213ENST00000490084 KANK4Q5T7N3 995 aaPredicted RBP25.71■■□□□ 1.71
TFR2-213ENST00000490084 TOPBP1Q92547 1522 aa25.66■■□□□ 1.7
TFR2-213ENST00000490084 RRBP1Q9P2E9 1410 aaKnown RBP25.65■■□□□ 1.7
TFR2-213ENST00000490084 NESP48681 1621 aa25.65■■□□□ 1.7
TFR2-213ENST00000490084 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
TFR2-213ENST00000490084 POLA1P09884 1462 aaPredicted RBP25.63■■□□□ 1.69
TFR2-213ENST00000490084 DIEXFQ68CQ4 756 aaKnown RBP25.61■■□□□ 1.69
TFR2-213ENST00000490084 RAD54L2Q9Y4B4 1467 aa25.59■■□□□ 1.69
TFR2-213ENST00000490084 LAMC3Q9Y6N6 1575 aa25.58■■□□□ 1.69
TFR2-213ENST00000490084 MAP3K1Q13233 1512 aa25.57■■□□□ 1.68
TFR2-213ENST00000490084 ZNF316A6NFI3 1004 aaPredicted RBP25.54■■□□□ 1.68
TFR2-213ENST00000490084 TIAM1Q13009 1591 aa25.54■■□□□ 1.68
TFR2-213ENST00000490084 CUL7Q14999 1698 aa25.51■■□□□ 1.67
TFR2-213ENST00000490084 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
TFR2-213ENST00000490084 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
TFR2-213ENST00000490084 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
TFR2-213ENST00000490084 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
TFR2-213ENST00000490084 DHX57Q6P158 1386 aaKnown RBP25.47■■□□□ 1.67
TFR2-213ENST00000490084 FHAD1B1AJZ9 1412 aa25.45■■□□□ 1.67
TFR2-213ENST00000490084 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms