RNA–Protein interactions for RNA: ENST00000359803.7

MDK-201, Transcript of midkine, humanhuman

APPRIS P2 TSL 2 BASIC

Gene MDK, Length 985 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-201ENST00000359803 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
MDK-201ENST00000359803 ABCC9O60706 1549 aa42.78■■■■■ 4.44
MDK-201ENST00000359803 CCDC180Q9P1Z9 1646 aa42.41■■■■■ 4.38
MDK-201ENST00000359803 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.09
MDK-201ENST00000359803 DNAJC5BQ9UF47 199 aa40.48■■■■■ 4.07
MDK-201ENST00000359803 NACADO15069 1562 aa40.19■■■■■ 4.02
MDK-201ENST00000359803 DCAF8L2P0C7V8 631 aa39.85■■■■□ 3.97
MDK-201ENST00000359803 PABPN1Q86U42 306 aaKnown RBP eCLIP39.75■■■■□ 3.95
MDK-201ENST00000359803 UNC13AQ9UPW8 1703 aa39.61■■■■□ 3.93
MDK-201ENST00000359803 MYO15BQ96JP2 1530 aa39.52■■■■□ 3.92
MDK-201ENST00000359803 BICRAQ9NZM4 1560 aa39.38■■■■□ 3.89
MDK-201ENST00000359803 ZCCHC6Q5VYS8 1495 aaKnown RBP38.89■■■■□ 3.82
MDK-201ENST00000359803 SHROOM4Q9ULL8 1493 aa38.88■■■■□ 3.81
MDK-201ENST00000359803 DCAF1Q9Y4B6 1507 aa38.84■■■■□ 3.81
MDK-201ENST00000359803 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.78
MDK-201ENST00000359803 CECR2Q9BXF3 1484 aa38.6■■■■□ 3.77
MDK-201ENST00000359803 SCRIBQ14160 1630 aa38.59■■■■□ 3.77
MDK-201ENST00000359803 EIF4G1Q04637 1599 aaKnown RBP38.46■■■■□ 3.75
MDK-201ENST00000359803 DNAJC5Q9H3Z4 198 aa37.53■■■■□ 3.6
MDK-201ENST00000359803 NCAPD3P42695 1498 aa37.11■■■■□ 3.53
MDK-201ENST00000359803 CUX2O14529 1486 aa37.09■■■■□ 3.53
MDK-201ENST00000359803 ERCC6Q03468 1493 aa37.01■■■■□ 3.51
MDK-201ENST00000359803 ATAD2BQ9ULI0 1458 aa36.92■■■■□ 3.5
MDK-201ENST00000359803 SMARCA2P51531 1590 aa36.82■■■■□ 3.48
MDK-201ENST00000359803 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
MDK-201ENST00000359803 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
MDK-201ENST00000359803 NESP48681 1621 aa36.63■■■■□ 3.45
MDK-201ENST00000359803 BAZ1BQ9UIG0 1483 aaKnown RBP36.56■■■■□ 3.44
MDK-201ENST00000359803 BAZ1AQ9NRL2 1556 aaPredicted RBP36.55■■■■□ 3.44
MDK-201ENST00000359803 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
MDK-201ENST00000359803 THOC2Q8NI27 1593 aaKnown RBP36.36■■■■□ 3.41
MDK-201ENST00000359803 LAMC3Q9Y6N6 1575 aa36.34■■■■□ 3.41
MDK-201ENST00000359803 MROH2BQ7Z745 1585 aa36.21■■■■□ 3.39
MDK-201ENST00000359803 PDS5BQ9NTI5 1447 aa36.16■■■■□ 3.38
MDK-201ENST00000359803 KIF21AQ7Z4S6 1674 aa36.15■■■■□ 3.38
MDK-201ENST00000359803 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
MDK-201ENST00000359803 MRC2Q9UBG0 1479 aa35.86■■■■□ 3.33
MDK-201ENST00000359803 WDR62O43379 1518 aa35.78■■■■□ 3.32
MDK-201ENST00000359803 WIZO95785 1651 aa35.75■■■■□ 3.31
MDK-201ENST00000359803 TRIM41Q8WV44 630 aa35.69■■■■□ 3.3
MDK-201ENST00000359803 CEP164Q9UPV0 1460 aa35.64■■■■□ 3.3
MDK-201ENST00000359803 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
MDK-201ENST00000359803 CFTRP13569 1480 aa35.46■■■■□ 3.27
MDK-201ENST00000359803 OSCARQ8IYS5 282 aa35.32■■■■□ 3.24
MDK-201ENST00000359803 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
MDK-201ENST00000359803 TOP2AP11388 1531 aaKnown RBP35.31■■■■□ 3.24
MDK-201ENST00000359803 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
MDK-201ENST00000359803 PRDM2Q13029 1718 aa35.06■■■■□ 3.2
MDK-201ENST00000359803 IFT140Q96RY7 1462 aa34.94■■■■□ 3.18
MDK-201ENST00000359803 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
MDK-201ENST00000359803 CCDC88BA6NC98 1476 aa34.89■■■■□ 3.18
MDK-201ENST00000359803 RIMBP3CA6NJZ7 1639 aa34.88■■■■□ 3.17
MDK-201ENST00000359803 RIMBP3BA6NNM3 1639 aa34.88■■■■□ 3.17
MDK-201ENST00000359803 RIMBP3Q9UFD9 1639 aa34.88■■■■□ 3.17
MDK-201ENST00000359803 TOPBP1Q92547 1522 aa34.82■■■■□ 3.16
MDK-201ENST00000359803 ARHGEF11O15085 1522 aa34.75■■■■□ 3.15
MDK-201ENST00000359803 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
MDK-201ENST00000359803 EIF4G3O43432 1585 aaKnown RBP34.7■■■■□ 3.14
MDK-201ENST00000359803 DNMBPQ6XZF7 1577 aa34.66■■■■□ 3.14
MDK-201ENST00000359803 TARBP1Q13395 1621 aaKnown RBP34.54■■■■□ 3.12
MDK-201ENST00000359803 AQRO60306 1485 aaKnown RBP eCLIP34.52■■■■□ 3.121e-9■■■■■ 32.7
MDK-201ENST00000359803 CHD1O14646 1710 aa34.51■■■■□ 3.12
MDK-201ENST00000359803 CYB5RLQ6IPT4 315 aa34.5■■■■□ 3.11
MDK-201ENST00000359803 SUPT5HO00267 1087 aaKnown RBP34.46■■■■□ 3.11
MDK-201ENST00000359803 POLA1P09884 1462 aaPredicted RBP34.44■■■■□ 3.1
MDK-201ENST00000359803 FBLN2P98095 1184 aa34.39■■■■□ 3.1
MDK-201ENST00000359803 ARAP1Q96P48 1450 aa34.37■■■■□ 3.09
MDK-201ENST00000359803 RAD54L2Q9Y4B4 1467 aa34.3■■■■□ 3.08
MDK-201ENST00000359803 SOGA1O94964 1423 aa34.27■■■■□ 3.08
MDK-201ENST00000359803 TRHP20396 242 aaPredicted RBP34.26■■■■□ 3.08
MDK-201ENST00000359803 TDRD9Q8NDG6 1382 aaKnown RBP34.25■■■■□ 3.07
MDK-201ENST00000359803 WDR97A6NE52 1622 aa34.2■■■■□ 3.07
MDK-201ENST00000359803 SNAPC4Q5SXM2 1469 aa34.18■■■■□ 3.06
MDK-201ENST00000359803 FGD5Q6ZNL6 1462 aa34.16■■■■□ 3.06
MDK-201ENST00000359803 CLASP1Q7Z460 1538 aa34.12■■■■□ 3.05
MDK-201ENST00000359803 MAGI1Q96QZ7 1491 aaPredicted RBP34.09■■■■□ 3.05
MDK-201ENST00000359803 CHMP7Q8WUX9 453 aaPredicted RBP34.09■■■■□ 3.05
MDK-201ENST00000359803 SYNJ1O43426 1573 aa34.08■■■■□ 3.05
MDK-201ENST00000359803 CUX1P39880 1505 aa34.05■■■■□ 3.04
MDK-201ENST00000359803 GRIN2BQ13224 1484 aa34.04■■■■□ 3.04
MDK-201ENST00000359803 SYNJ2O15056 1496 aa33.98■■■■□ 3.03
MDK-201ENST00000359803 GAPVD1Q14C86 1478 aa33.86■■■■□ 3.01
MDK-201ENST00000359803 PBRM1Q86U86 1689 aa33.86■■■■□ 3.01
MDK-201ENST00000359803 ABCA10Q8WWZ4 1543 aa33.76■■■■□ 3
MDK-201ENST00000359803 ABCA5Q8WWZ7 1642 aa33.75■■■□□ 2.99
MDK-201ENST00000359803 GRIN2AQ12879 1464 aa33.6■■■□□ 2.97
MDK-201ENST00000359803 AEBP2Q6ZN18 517 aaPredicted RBP33.59■■■□□ 2.97
MDK-201ENST00000359803 WRNQ14191 1432 aaPredicted RBP eCLIP33.55■■■□□ 2.96
MDK-201ENST00000359803 ADAMTS12P58397 1594 aa33.52■■■□□ 2.96
MDK-201ENST00000359803 ERCC6L2Q5T890 1561 aa33.52■■■□□ 2.96
MDK-201ENST00000359803 NUP160Q12769 1436 aa33.51■■■□□ 2.95
MDK-201ENST00000359803 CEP170Q5SW79 1584 aa33.48■■■□□ 2.95
MDK-201ENST00000359803 FHAD1B1AJZ9 1412 aa33.42■■■□□ 2.94
MDK-201ENST00000359803 TOP2BQ02880 1626 aa33.41■■■□□ 2.94
MDK-201ENST00000359803 BIVM-ERCC5R4GMW8 1640 aa33.41■■■□□ 2.94
MDK-201ENST00000359803 SHROOM2Q13796 1616 aa33.39■■■□□ 2.94
MDK-201ENST00000359803 ERICH3Q5RHP9 1530 aa33.34■■■□□ 2.93
MDK-201ENST00000359803 PRG4Q92954 1404 aaPredicted RBP33.2■■■□□ 2.91
MDK-201ENST00000359803 KIF13AQ9H1H9 1805 aa33.16■■■□□ 2.9
MDK-201ENST00000359803 JPH4Q96JJ6 628 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms