RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
GGA2-210ENST00000567339 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
GGA2-210ENST00000567339 ABCC9O60706 1549 aa20.27■□□□□ 0.84
GGA2-210ENST00000567339 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
GGA2-210ENST00000567339 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
GGA2-210ENST00000567339 NACADO15069 1562 aa19.7■□□□□ 0.74
GGA2-210ENST00000567339 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
GGA2-210ENST00000567339 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
GGA2-210ENST00000567339 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
GGA2-210ENST00000567339 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
GGA2-210ENST00000567339 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
GGA2-210ENST00000567339 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
GGA2-210ENST00000567339 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
GGA2-210ENST00000567339 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
GGA2-210ENST00000567339 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
GGA2-210ENST00000567339 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
GGA2-210ENST00000567339 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
GGA2-210ENST00000567339 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
GGA2-210ENST00000567339 CECR2Q9BXF3 1484 aa18.33■□□□□ 0.53
GGA2-210ENST00000567339 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
GGA2-210ENST00000567339 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
GGA2-210ENST00000567339 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
GGA2-210ENST00000567339 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
GGA2-210ENST00000567339 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
GGA2-210ENST00000567339 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
GGA2-210ENST00000567339 HMGXB3Q12766 1538 aa18.11■□□□□ 0.49
GGA2-210ENST00000567339 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
GGA2-210ENST00000567339 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
GGA2-210ENST00000567339 WIZO95785 1651 aa17.96■□□□□ 0.47
GGA2-210ENST00000567339 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
GGA2-210ENST00000567339 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
GGA2-210ENST00000567339 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
GGA2-210ENST00000567339 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
GGA2-210ENST00000567339 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
GGA2-210ENST00000567339 CFTRP13569 1480 aa17.57■□□□□ 0.4
GGA2-210ENST00000567339 NESP48681 1621 aa17.57■□□□□ 0.4
GGA2-210ENST00000567339 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
GGA2-210ENST00000567339 ERCC6Q03468 1493 aa17.53■□□□□ 0.4
GGA2-210ENST00000567339 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
GGA2-210ENST00000567339 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
GGA2-210ENST00000567339 CEP164Q9UPV0 1460 aa17.39■□□□□ 0.37
GGA2-210ENST00000567339 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
GGA2-210ENST00000567339 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
GGA2-210ENST00000567339 CUX2O14529 1486 aa17.33■□□□□ 0.37
GGA2-210ENST00000567339 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
GGA2-210ENST00000567339 WDR62O43379 1518 aa17.27■□□□□ 0.36
GGA2-210ENST00000567339 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
GGA2-210ENST00000567339 URB2Q14146 1524 aaKnown RBP17.19■□□□□ 0.34
GGA2-210ENST00000567339 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
GGA2-210ENST00000567339 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
GGA2-210ENST00000567339 CUX1P39880 1505 aa17.06■□□□□ 0.32
GGA2-210ENST00000567339 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
GGA2-210ENST00000567339 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
GGA2-210ENST00000567339 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
GGA2-210ENST00000567339 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
GGA2-210ENST00000567339 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
GGA2-210ENST00000567339 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
GGA2-210ENST00000567339 SOGA1O94964 1423 aa16.96■□□□□ 0.3
GGA2-210ENST00000567339 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
GGA2-210ENST00000567339 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
GGA2-210ENST00000567339 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
GGA2-210ENST00000567339 RAD54L2Q9Y4B4 1467 aa16.88■□□□□ 0.29
GGA2-210ENST00000567339 ABCA10Q8WWZ4 1543 aa16.88■□□□□ 0.29
GGA2-210ENST00000567339 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
GGA2-210ENST00000567339 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
GGA2-210ENST00000567339 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
GGA2-210ENST00000567339 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
GGA2-210ENST00000567339 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
GGA2-210ENST00000567339 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
GGA2-210ENST00000567339 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
GGA2-210ENST00000567339 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
GGA2-210ENST00000567339 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
GGA2-210ENST00000567339 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
GGA2-210ENST00000567339 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
GGA2-210ENST00000567339 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
GGA2-210ENST00000567339 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
GGA2-210ENST00000567339 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
GGA2-210ENST00000567339 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
GGA2-210ENST00000567339 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
GGA2-210ENST00000567339 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
GGA2-210ENST00000567339 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
GGA2-210ENST00000567339 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
GGA2-210ENST00000567339 IGF1RP08069 1367 aa16.58■□□□□ 0.24
GGA2-210ENST00000567339 CUL7Q14999 1698 aa16.56■□□□□ 0.24
GGA2-210ENST00000567339 FBLN2P98095 1184 aa16.56■□□□□ 0.24
GGA2-210ENST00000567339 EEA1Q15075 1411 aa16.55■□□□□ 0.24
GGA2-210ENST00000567339 CHD1O14646 1710 aa16.54■□□□□ 0.24
GGA2-210ENST00000567339 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
GGA2-210ENST00000567339 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
GGA2-210ENST00000567339 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
GGA2-210ENST00000567339 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
GGA2-210ENST00000567339 NUP160Q12769 1436 aa16.46■□□□□ 0.23
GGA2-210ENST00000567339 CLASP1Q7Z460 1538 aa16.44■□□□□ 0.22
GGA2-210ENST00000567339 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
GGA2-210ENST00000567339 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
GGA2-210ENST00000567339 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
GGA2-210ENST00000567339 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
GGA2-210ENST00000567339 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
GGA2-210ENST00000567339 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
GGA2-210ENST00000567339 KIF21BO75037 1637 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms