RNA–Protein interactions for RNA: ENST00000357903.7

APP-204, Transcript of amyloid beta precursor protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APP, Length 3,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-204ENST00000357903 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
APP-204ENST00000357903 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
APP-204ENST00000357903 SHROOM4Q9ULL8 1493 aa28.99■■■□□ 2.23
APP-204ENST00000357903 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
APP-204ENST00000357903 ZCCHC6Q5VYS8 1495 aaKnown RBP27.24■■□□□ 1.95
APP-204ENST00000357903 CCDC180Q9P1Z9 1646 aa27.15■■□□□ 1.94
APP-204ENST00000357903 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
APP-204ENST00000357903 ABCC9O60706 1549 aa26.84■■□□□ 1.89
APP-204ENST00000357903 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
APP-204ENST00000357903 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
APP-204ENST00000357903 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.82
APP-204ENST00000357903 SCRIBQ14160 1630 aa26.39■■□□□ 1.82
APP-204ENST00000357903 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
APP-204ENST00000357903 TRIM41Q8WV44 630 aa26.23■■□□□ 1.79
APP-204ENST00000357903 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
APP-204ENST00000357903 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.76
APP-204ENST00000357903 DCAF1Q9Y4B6 1507 aa26.05■■□□□ 1.76
APP-204ENST00000357903 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
APP-204ENST00000357903 PPARGC1BQ86YN6 1023 aaKnown RBP25.82■■□□□ 1.72
APP-204ENST00000357903 TTBK1Q5TCY1 1321 aaPredicted RBP25.79■■□□□ 1.72
APP-204ENST00000357903 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
APP-204ENST00000357903 NACADO15069 1562 aa25.57■■□□□ 1.68
APP-204ENST00000357903 RANGAP1P46060 587 aaPredicted RBP25.5■■□□□ 1.67
APP-204ENST00000357903 RB1CC1Q8TDY2 1594 aa25.47■■□□□ 1.67
APP-204ENST00000357903 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
APP-204ENST00000357903 HRCP23327 699 aa25.44■■□□□ 1.66
APP-204ENST00000357903 TRIM26Q12899 539 aaPredicted RBP25.33■■□□□ 1.64
APP-204ENST00000357903 UBTFP17480 764 aaKnown RBP25.32■■□□□ 1.64
APP-204ENST00000357903 WIZO95785 1651 aa25.25■■□□□ 1.63
APP-204ENST00000357903 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
APP-204ENST00000357903 ABCC8Q09428 1581 aa24.89■■□□□ 1.57
APP-204ENST00000357903 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
APP-204ENST00000357903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.86■■□□□ 1.57
APP-204ENST00000357903 CCER1Q8TC90 406 aaPredicted RBP24.86■■□□□ 1.57
APP-204ENST00000357903 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
APP-204ENST00000357903 APLP2Q06481 763 aa24.78■■□□□ 1.56
APP-204ENST00000357903 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
APP-204ENST00000357903 SOGA1O94964 1423 aa24.72■■□□□ 1.55
APP-204ENST00000357903 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.53
APP-204ENST00000357903 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
APP-204ENST00000357903 ZEB1P37275 1124 aaPredicted RBP24.58■■□□□ 1.53
APP-204ENST00000357903 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
APP-204ENST00000357903 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
APP-204ENST00000357903 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
APP-204ENST00000357903 UNC13AQ9UPW8 1703 aa24.54■■□□□ 1.52
APP-204ENST00000357903 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
APP-204ENST00000357903 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
APP-204ENST00000357903 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
APP-204ENST00000357903 CEP162Q5TB80 1403 aa24.42■■□□□ 1.5
APP-204ENST00000357903 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
APP-204ENST00000357903 ITGAEP38570 1179 aa24.39■■□□□ 1.5
APP-204ENST00000357903 P3H3Q8IVL6 736 aa24.24■■□□□ 1.47
APP-204ENST00000357903 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
APP-204ENST00000357903 GOLGA3Q08378 1498 aa24.17■■□□□ 1.46
APP-204ENST00000357903 CLIP1P30622 1438 aa24.16■■□□□ 1.46
APP-204ENST00000357903 EEA1Q15075 1411 aa24.1■■□□□ 1.45
APP-204ENST00000357903 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
APP-204ENST00000357903 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
APP-204ENST00000357903 RAPGEF2Q9Y4G8 1499 aa24.01■■□□□ 1.43
APP-204ENST00000357903 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
APP-204ENST00000357903 YTHDC1Q96MU7 727 aaKnown RBP24■■□□□ 1.43
APP-204ENST00000357903 DIEXFQ68CQ4 756 aaKnown RBP23.93■■□□□ 1.42
APP-204ENST00000357903 FAM50AQ14320 339 aaKnown RBP23.87■■□□□ 1.41
APP-204ENST00000357903 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
APP-204ENST00000357903 KANK4Q5T7N3 995 aaPredicted RBP23.85■■□□□ 1.41
APP-204ENST00000357903 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
APP-204ENST00000357903 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
APP-204ENST00000357903 CUX2O14529 1486 aa23.8■■□□□ 1.4
APP-204ENST00000357903 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
APP-204ENST00000357903 PEG3Q9GZU2 1588 aa23.77■■□□□ 1.4
APP-204ENST00000357903 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
APP-204ENST00000357903 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
APP-204ENST00000357903 NEUROD1Q13562 356 aa23.64■■□□□ 1.38
APP-204ENST00000357903 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.38
APP-204ENST00000357903 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.37
APP-204ENST00000357903 CUX1P39880 1505 aa23.63■■□□□ 1.37
APP-204ENST00000357903 NESP48681 1621 aa23.59■■□□□ 1.37
APP-204ENST00000357903 CFTRP13569 1480 aa23.59■■□□□ 1.37
APP-204ENST00000357903 FBLN2P98095 1184 aa23.58■■□□□ 1.37
APP-204ENST00000357903 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
APP-204ENST00000357903 TOP2BQ02880 1626 aa23.56■■□□□ 1.36
APP-204ENST00000357903 CENPBP07199 599 aaPredicted RBP23.54■■□□□ 1.36
APP-204ENST00000357903 CC2D2AQ9P2K1 1620 aa23.54■■□□□ 1.36
APP-204ENST00000357903 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
APP-204ENST00000357903 HMGXB3Q12766 1538 aa23.52■■□□□ 1.36
APP-204ENST00000357903 IGF1RP08069 1367 aa23.52■■□□□ 1.36
APP-204ENST00000357903 KIF21BO75037 1637 aa23.51■■□□□ 1.35
APP-204ENST00000357903 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
APP-204ENST00000357903 FGD5Q6ZNL6 1462 aa23.5■■□□□ 1.35
APP-204ENST00000357903 ARAP1Q96P48 1450 aa23.44■■□□□ 1.34
APP-204ENST00000357903 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
APP-204ENST00000357903 MIER1Q8N108 512 aa23.39■■□□□ 1.34
APP-204ENST00000357903 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
APP-204ENST00000357903 HIRIP3Q9BW71 556 aaPredicted RBP23.35■■□□□ 1.33
APP-204ENST00000357903 CHIC2Q9UKJ5 165 aa23.35■■□□□ 1.33
APP-204ENST00000357903 FHOD3Q2V2M9 1422 aa23.35■■□□□ 1.33
APP-204ENST00000357903 GTF3C3Q9Y5Q9 886 aa23.33■■□□□ 1.33
APP-204ENST00000357903 CCNB3Q8WWL7 1395 aa23.32■■□□□ 1.32
APP-204ENST00000357903 SIN3AQ96ST3 1273 aa23.29■■□□□ 1.32
APP-204ENST00000357903 ARHGAP35Q9NRY4 1499 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms